prot_H-elongata_contig96477.17033.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig96477.17033.1
Unique Nameprot_H-elongata_contig96477.17033.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length124
Homology
BLAST of mRNA_H-elongata_contig96477.17033.1 vs. uniprot
Match: D7FUY8_ECTSI (Similar to Cullin-1 (CUL-1) isoform 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUY8_ECTSI)

HSP 1 Score: 202 bits (514), Expect = 1.900e-58
Identity = 94/123 (76.42%), Postives = 113/123 (91.87%), Query Frame = 0
Query:    1 MYASGVLKGLLSFENTTAHSDTDLIERYRTSFHNYSVGMKYGSDLFKYLDRHWITTNHCETGRSPKDGVYFVEEMSLIVWKEQVFDSLKERLRRNTIRIINASRERNLADLDDNDAVKSLLET 123
            +Y +GVLKGLL+F+N TAHS T+L+ RYRTSFHNYSVGM YGSD FKYLDRHWI TNHCETG SPK+GVYFV EMSL+VWKE+VF++LKERLR NT+++INA+RERNL++LDDNDAV+SLL+T
Sbjct:   70 LYVAGVLKGLLAFDNATAHSYTELLVRYRTSFHNYSVGMHYGSDWFKYLDRHWINTNHCETGVSPKEGVYFVREMSLMVWKERVFEALKERLRHNTMKVINAARERNLSNLDDNDAVRSLLKT 192          
BLAST of mRNA_H-elongata_contig96477.17033.1 vs. uniprot
Match: A0A835YSZ1_9STRA (Cullin n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSZ1_9STRA)

HSP 1 Score: 154 bits (389), Expect = 4.430e-41
Identity = 70/122 (57.38%), Postives = 92/122 (75.41%), Query Frame = 0
Query:    2 YASGVLKGLLSFENTTAHSDTDLIERYRTSFHNYSVGMKYGSDLFKYLDRHWITTNHCETGRSPKDGVYFVEEMSLIVWKEQVFDSLKERLRRNTIRIINASRERNLADLDDNDAVKSLLET 123
            Y  GVL+GLL++E  TAH   DL+ RYR +F NY+ GM Y +D+F YLDRHW+ TNHCETGRSP+DGVY V EM+L+VWKE  F+SLK +LR + + ++NA+RER+   LDD  AV+ +L T
Sbjct:   72 YVDGVLQGLLAYEACTAHCSLDLLARYRGAFDNYATGMGYAADIFSYLDRHWVATNHCETGRSPQDGVYTVYEMALVVWKELAFESLKVKLRNHIMAVLNAARERDAPSLDDGGAVRGVLAT 193          
BLAST of mRNA_H-elongata_contig96477.17033.1 vs. uniprot
Match: W2PVV8_PHYPN (CULLIN_2 domain-containing protein n=34 Tax=Phytophthora TaxID=4783 RepID=W2PVV8_PHYPN)

HSP 1 Score: 89.4 bits (220), Expect = 2.920e-18
Identity = 41/103 (39.81%), Postives = 66/103 (64.08%), Query Frame = 0
Query:   21 DTDLIERYRTSFHNYSVGMKYGSDLFKYLDRHWITTNHCETGRSPKDGVYFVEEMSLIVWKEQVFDSLKERLRRNTIRIINASRERNLADLDDNDAVKSLLET 123
            + + +  Y TSF  ++ G  Y S+LF+YL+R+WI+ +HCETG++P  GVY V E+SL +W +  F  LK+RL +  I I +A+R +     +D D + S ++T
Sbjct:  135 EPEFLSHYCTSFEAFTTGTSYISELFRYLNRYWISYSHCETGQAPVPGVYPVTELSLHIWHDIAFSKLKKRLVKAIIHIFHAARRKRSECFEDGDCIASTVQT 237          
BLAST of mRNA_H-elongata_contig96477.17033.1 vs. uniprot
Match: A0A8K1CEG8_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CEG8_PYTOL)

HSP 1 Score: 89.0 bits (219), Expect = 3.980e-18
Identity = 39/103 (37.86%), Postives = 69/103 (66.99%), Query Frame = 0
Query:   21 DTDLIERYRTSFHNYSVGMKYGSDLFKYLDRHWITTNHCETGRSPKDGVYFVEEMSLIVWKEQVFDSLKERLRRNTIRIINASRERNLADLDDNDAVKSLLET 123
            + + ++RY TSF ++S G+ Y S+LF+YL+R+WIT +HCETG++P  GVY V E++L +W +  F  LK++L  + +    A+R+      +D + + +++ET
Sbjct:  122 EIEFLKRYYTSFQSFSTGVTYISELFRYLNRYWITYSHCETGQAPVPGVYPVTELALHIWHDIAFSRLKKKLVSSVMYAFRAARDERSEFFEDGEHISNIVET 224          
BLAST of mRNA_H-elongata_contig96477.17033.1 vs. uniprot
Match: A0A225WZJ1_9STRA (Cullin family protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WZJ1_9STRA)

HSP 1 Score: 87.8 bits (216), Expect = 1.000e-17
Identity = 41/105 (39.05%), Postives = 65/105 (61.90%), Query Frame = 0
Query:   19 HSDTDLIERYRTSFHNYSVGMKYGSDLFKYLDRHWITTNHCETGRSPKDGVYFVEEMSLIVWKEQVFDSLKERLRRNTIRIINASRERNLADLDDNDAVKSLLET 123
            H + + +  Y  SF  ++ G  Y S+LF+YL+R+WI+ +HCETG++P  GVY V E++L +W +  F  LK+RL +  I I +A+R       +D D V S ++T
Sbjct:   78 HGEPEFLTHYCASFEAFATGTSYISELFRYLNRYWISYSHCETGQAPVPGVYPVTELALHIWHDIAFSKLKKRLVKAIIHIFHAARRDRSECFEDGDCVGSTIQT 182          
BLAST of mRNA_H-elongata_contig96477.17033.1 vs. uniprot
Match: A0A3M6V6L0_9STRA (CULLIN_2 domain-containing protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6V6L0_9STRA)

HSP 1 Score: 82.4 bits (202), Expect = 7.820e-16
Identity = 38/96 (39.58%), Postives = 61/96 (63.54%), Query Frame = 0
Query:   28 YRTSFHNYSVGMKYGSDLFKYLDRHWITTNHCETGRSPKDGVYFVEEMSLIVWKEQVFDSLKERLRRNTIRIINASRERNLADLDDNDAVKSLLET 123
            Y +SF +++ G  Y S+LF+YL+R+WI+ +HCETG +P  GVY V E+SL +W +  F  LK+RL +  I I +++R       +D D +   ++T
Sbjct:  129 YCSSFESFATGTNYISELFRYLNRYWISYSHCETGHAPVPGVYPVTELSLHIWHDIAFSKLKKRLVKAIIHIFHSARRSKSECFEDGDCIARTVQT 224          
BLAST of mRNA_H-elongata_contig96477.17033.1 vs. uniprot
Match: A0A0P1AM02_PLAHL (Cullin family n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AM02_PLAHL)

HSP 1 Score: 77.4 bits (189), Expect = 4.390e-14
Identity = 38/107 (35.51%), Postives = 64/107 (59.81%), Query Frame = 0
Query:   17 TAHSDTDLIERYRTSFHNYSVGMKYGSDLFKYLDRHWITTNHCETGRSPKDGVYFVEEMSLIVWKEQVFDSLKERLRRNTIRIINASRERNLADLDDNDAVKSLLET 123
            T   D + +  Y TSF  ++ G  Y S+LF+YL+R+WI+ +HC+TG++P  GVY V E+SL +W +  F  L++RL    + I +++R       +  D + S ++T
Sbjct:   81 TIDGDPEFLALYCTSFEAFTTGTSYISELFRYLNRYWISYSHCKTGQAPVPGVYPVTELSLHIWHDVAFVKLRKRLITAILHIYHSARLDKSDCFEYGDCIASTVQT 187          
BLAST of mRNA_H-elongata_contig96477.17033.1 vs. uniprot
Match: A0A2D4BTB1_PYTIN (CULLIN_2 domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BTB1_PYTIN)

HSP 1 Score: 66.6 bits (161), Expect = 2.620e-10
Identity = 33/112 (29.46%), Postives = 62/112 (55.36%), Query Frame = 0
Query:   23 DLIERYRTSFHNYSVGMKYGSDLFKYLDRHWITTNHCETGRSPKDGVYFVEE-----------MSLIVWKEQVFDSLKERLRRNTIRIINASRERNLADLDDNDAVKSLLET 123
            + ++ Y   F +++ G  + S+LF+YL+R+WI+ +HCE+G++P  GVY V E           ++L +W +  F  L++++  + + +    R       DD D + SL+ET
Sbjct:   87 EFLQAYCCRFRSFTTGTSFISELFRYLNRYWISYSHCESGQAPVPGVYPVTEYVTNHYYDLCQLALHIWHDIAFLKLRKKVIASVMHVFRIVRNGRSEVFDDGDLIASLVET 198          
BLAST of mRNA_H-elongata_contig96477.17033.1 vs. uniprot
Match: A0A2P6NSZ7_9EUKA (Cullin A n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6NSZ7_9EUKA)

HSP 1 Score: 62.8 bits (151), Expect = 5.810e-9
Identity = 40/115 (34.78%), Postives = 59/115 (51.30%), Query Frame = 0
Query:    2 YASGVLKGLLSFENTTAHSDTDLIERYRTSFHNYSVGMKYGSDLFKYLDRHWITTNHCETGRSPKDG--VYFVEEMSLIVWKEQVFDSLKERLRRNTIRIINASRERNLADLDDN 114
            + S  +K LL    T    D  L+  Y   +  Y   MKY S++F+YL+RHWI        R   DG  V+ V  +SL++W+E +F  LK RL +  + +I   +ERN   +D N
Sbjct:   89 FLSNYMKALLKVAETKV--DEGLLHYYHVEWTRYVTAMKYVSNIFQYLNRHWIK-------RESDDGKAVFDVRTLSLVIWRENLFSHLKTRLTQALLVLI--EKERNGEQIDTN 192          
BLAST of mRNA_H-elongata_contig96477.17033.1 vs. uniprot
Match: A0A6B2KYM3_9EUKA (CULLIN_2 domain-containing protein n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2KYM3_9EUKA)

HSP 1 Score: 51.6 bits (122), Expect = 4.640e-5
Identity = 30/102 (29.41%), Postives = 58/102 (56.86%), Query Frame = 0
Query:   21 DTDLIERYRTSFHNYSVGMKYGSDLFKYLDRHWITTNHCETGRSPKDGVYFVEEMSLIVWKEQVFDSLKERLRRNTIRIINASRERNLADLDDNDAVKSLLE 122
            D  L+  Y+  +  Y+  ++  + +F+YL+RHWI     ET ++ K  VY V  ++L++W++ +F  LK R+    + +I   +ERN   +D +  VK +++
Sbjct:   89 DDSLLNYYKKEWDRYTTALRVLNKIFEYLNRHWIK-REIETEQNKKQ-VYEVYTLALVIWRDDLFAPLKNRITPALLSLI--EKERNGEQIDTS-LVKGVMD 185          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig96477.17033.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
D7FUY8_ECTSI1.900e-5876.42Similar to Cullin-1 (CUL-1) isoform 1 n=1 Tax=Ecto... [more]
A0A835YSZ1_9STRA4.430e-4157.38Cullin n=1 Tax=Tribonema minus TaxID=303371 RepID=... [more]
W2PVV8_PHYPN2.920e-1839.81CULLIN_2 domain-containing protein n=34 Tax=Phytop... [more]
A0A8K1CEG8_PYTOL3.980e-1837.86Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A225WZJ1_9STRA1.000e-1739.05Cullin family protein n=1 Tax=Phytophthora megakar... [more]
A0A3M6V6L0_9STRA7.820e-1639.58CULLIN_2 domain-containing protein n=1 Tax=Peronos... [more]
A0A0P1AM02_PLAHL4.390e-1435.51Cullin family n=1 Tax=Plasmopara halstedii TaxID=4... [more]
A0A2D4BTB1_PYTIN2.620e-1029.46CULLIN_2 domain-containing protein n=1 Tax=Pythium... [more]
A0A2P6NSZ7_9EUKA5.810e-934.78Cullin A n=1 Tax=Planoprotostelium fungivorum TaxI... [more]
A0A6B2KYM3_9EUKA4.640e-529.41CULLIN_2 domain-containing protein n=1 Tax=Arcella... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.20.1310.10coord: 2..95
e-value: 1.7E-16
score: 62.8
NoneNo IPR availablePANTHERPTHR11932:SF81CULLIN-1coord: 14..108
NoneNo IPR availablePANTHERPTHR11932CULLINcoord: 14..108
IPR001373Cullin, N-terminalPFAMPF00888Cullincoord: 17..122
e-value: 1.2E-14
score: 53.8
IPR016159Cullin repeat-like-containing domain superfamilySUPERFAMILY74788Cullin repeat-likecoord: 15..112

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig96477contigH-elongata_contig96477:100..980 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig96477.17033.1mRNA_H-elongata_contig96477.17033.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig96477 100..980 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig96477.17033.1 ID=prot_H-elongata_contig96477.17033.1|Name=mRNA_H-elongata_contig96477.17033.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=124bp
MYASGVLKGLLSFENTTAHSDTDLIERYRTSFHNYSVGMKYGSDLFKYLD
RHWITTNHCETGRSPKDGVYFVEEMSLIVWKEQVFDSLKERLRRNTIRII
NASRERNLADLDDNDAVKSLLET*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001373Cullin_N
IPR016159Cullin_repeat-like_dom_sf