prot_H-elongata_contig96370.17027.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig96370.17027.1
Unique Nameprot_H-elongata_contig96370.17027.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length51
Homology
BLAST of mRNA_H-elongata_contig96370.17027.1 vs. uniprot
Match: D7G6Q7_ECTSI (PYlqF, plastid YlqF/RbgA-like GTPase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6Q7_ECTSI)

HSP 1 Score: 92.4 bits (228), Expect = 1.220e-20
Identity = 41/46 (89.13%), Postives = 43/46 (93.48%), Query Frame = 0
Query:    5 YPGHIAKAERELQDYLKMVDVVIEVRDCRIPAATTHQLVPKWVGNR 50
            YPGHIAKAER+LQDYL MVDVV+EVRDCRIPAATTHQLVP WVG R
Sbjct:  174 YPGHIAKAERQLQDYLNMVDVVVEVRDCRIPAATTHQLVPSWVGKR 219          
BLAST of mRNA_H-elongata_contig96370.17027.1 vs. uniprot
Match: A0A835ZND5_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZND5_9STRA)

HSP 1 Score: 81.3 bits (199), Expect = 9.780e-17
Identity = 35/46 (76.09%), Postives = 41/46 (89.13%), Query Frame = 0
Query:    5 YPGHIAKAERELQDYLKMVDVVIEVRDCRIPAATTHQLVPKWVGNR 50
            YPGHIAKAER L++YLK+VDVV+EVRD RIP +TTH LVP+WVG R
Sbjct:   89 YPGHIAKAERTLEEYLKLVDVVVEVRDARIPISTTHPLVPRWVGGR 134          
BLAST of mRNA_H-elongata_contig96370.17027.1 vs. uniprot
Match: A0A4D9DA39_9STRA (G domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DA39_9STRA)

HSP 1 Score: 80.9 bits (198), Expect = 1.420e-16
Identity = 36/46 (78.26%), Postives = 40/46 (86.96%), Query Frame = 0
Query:    5 YPGHIAKAERELQDYLKMVDVVIEVRDCRIPAATTHQLVPKWVGNR 50
            YPGHIAKAERELQD+LK+VDVV+E RD RIP ATTH LV +WVG R
Sbjct:  102 YPGHIAKAERELQDFLKLVDVVVEARDARIPTATTHPLVRQWVGRR 147          
BLAST of mRNA_H-elongata_contig96370.17027.1 vs. uniprot
Match: A0A067FN08_CITSI (G domain-containing protein n=1 Tax=Citrus sinensis TaxID=2711 RepID=A0A067FN08_CITSI)

HSP 1 Score: 78.2 bits (191), Expect = 4.340e-16
Identity = 33/51 (64.71%), Postives = 43/51 (84.31%), Query Frame = 0
Query:    1 PTERYPGHIAKAERELQDYLKMVDVVIEVRDCRIPAATTHQLVPKWVGNRR 51
            P + YPGHIAK E+EL+D LK++DVVIEVRD RIP +TTH L+ +W+GNR+
Sbjct:   99 PVQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRK 149          
BLAST of mRNA_H-elongata_contig96370.17027.1 vs. uniprot
Match: A0A2H5NLA3_CITUN (G domain-containing protein n=1 Tax=Citrus unshiu TaxID=55188 RepID=A0A2H5NLA3_CITUN)

HSP 1 Score: 78.2 bits (191), Expect = 9.450e-16
Identity = 33/51 (64.71%), Postives = 43/51 (84.31%), Query Frame = 0
Query:    1 PTERYPGHIAKAERELQDYLKMVDVVIEVRDCRIPAATTHQLVPKWVGNRR 51
            P + YPGHIAK E+EL+D LK++DVVIEVRD RIP +TTH L+ +W+GNR+
Sbjct:   88 PVQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRK 138          
BLAST of mRNA_H-elongata_contig96370.17027.1 vs. uniprot
Match: V4TZW1_CITCL (G domain-containing protein n=9 Tax=Citrus TaxID=2706 RepID=V4TZW1_CITCL)

HSP 1 Score: 78.2 bits (191), Expect = 9.840e-16
Identity = 33/51 (64.71%), Postives = 43/51 (84.31%), Query Frame = 0
Query:    1 PTERYPGHIAKAERELQDYLKMVDVVIEVRDCRIPAATTHQLVPKWVGNRR 51
            P + YPGHIAK E+EL+D LK++DVVIEVRD RIP +TTH L+ +W+GNR+
Sbjct:   95 PVQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRK 145          
BLAST of mRNA_H-elongata_contig96370.17027.1 vs. uniprot
Match: A0A482SIN3_9ARCH (Ribosome biogenesis GTPase YlqF n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SIN3_9ARCH)

HSP 1 Score: 77.4 bits (189), Expect = 1.830e-15
Identity = 35/46 (76.09%), Postives = 40/46 (86.96%), Query Frame = 0
Query:    5 YPGHIAKAERELQDYLKMVDVVIEVRDCRIPAATTHQLVPKWVGNR 50
            YPGHIAKAEREL +YLK VDVVIEV D RIP ATTH +VP+WVG++
Sbjct:   17 YPGHIAKAERELAEYLKKVDVVIEVIDARIPFATTHPIVPQWVGSK 62          
BLAST of mRNA_H-elongata_contig96370.17027.1 vs. uniprot
Match: A0A5A7REN9_STRAF (GTP-binding family protein (Fragment) n=1 Tax=Striga asiatica TaxID=4170 RepID=A0A5A7REN9_STRAF)

HSP 1 Score: 77.0 bits (188), Expect = 1.910e-15
Identity = 33/51 (64.71%), Postives = 42/51 (82.35%), Query Frame = 0
Query:    1 PTERYPGHIAKAERELQDYLKMVDVVIEVRDCRIPAATTHQLVPKWVGNRR 51
            P + YPGHIAK E+EL+D LK++DVVIEVRD RIP +TTH L+  W+GNR+
Sbjct:   68 PVQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPMSTTHPLMDLWLGNRK 118          
BLAST of mRNA_H-elongata_contig96370.17027.1 vs. uniprot
Match: A0A3S3N7K6_9MAGN (DAR GTPase 3, chloroplastic isoform X1 n=1 Tax=Cinnamomum micranthum f. kanehirae TaxID=337451 RepID=A0A3S3N7K6_9MAGN)

HSP 1 Score: 77.4 bits (189), Expect = 1.970e-15
Identity = 33/51 (64.71%), Postives = 42/51 (82.35%), Query Frame = 0
Query:    1 PTERYPGHIAKAERELQDYLKMVDVVIEVRDCRIPAATTHQLVPKWVGNRR 51
            P + YPGHIAK E+EL+D LK++DVVIEVRD RIP AT+H L+  W+GNR+
Sbjct:  105 PVQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLATSHPLMDSWLGNRK 155          
BLAST of mRNA_H-elongata_contig96370.17027.1 vs. uniprot
Match: UPI00047D0DB9 (ribosome biogenesis GTPase YlqF n=1 Tax=Fischerella sp. PCC 9605 TaxID=1173024 RepID=UPI00047D0DB9)

HSP 1 Score: 76.6 bits (187), Expect = 2.010e-15
Identity = 33/47 (70.21%), Postives = 40/47 (85.11%), Query Frame = 0
Query:    5 YPGHIAKAERELQDYLKMVDVVIEVRDCRIPAATTHQLVPKWVGNRR 51
            YPGHIAKAE+ LQ+ LK+VDVV+EVRD RIP AT H  +PKWVGN++
Sbjct:   15 YPGHIAKAEKALQEQLKLVDVVLEVRDARIPLATYHPQIPKWVGNKK 61          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig96370.17027.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G6Q7_ECTSI1.220e-2089.13PYlqF, plastid YlqF/RbgA-like GTPase n=2 Tax=Ectoc... [more]
A0A835ZND5_9STRA9.780e-1776.09P-loop containing nucleoside triphosphate hydrolas... [more]
A0A4D9DA39_9STRA1.420e-1678.26G domain-containing protein n=2 Tax=Monodopsidacea... [more]
A0A067FN08_CITSI4.340e-1664.71G domain-containing protein n=1 Tax=Citrus sinensi... [more]
A0A2H5NLA3_CITUN9.450e-1664.71G domain-containing protein n=1 Tax=Citrus unshiu ... [more]
V4TZW1_CITCL9.840e-1664.71G domain-containing protein n=9 Tax=Citrus TaxID=2... [more]
A0A482SIN3_9ARCH1.830e-1576.09Ribosome biogenesis GTPase YlqF n=1 Tax=archaeon T... [more]
A0A5A7REN9_STRAF1.910e-1564.71GTP-binding family protein (Fragment) n=1 Tax=Stri... [more]
A0A3S3N7K6_9MAGN1.970e-1564.71DAR GTPase 3, chloroplastic isoform X1 n=1 Tax=Cin... [more]
UPI00047D0DB92.010e-1570.21ribosome biogenesis GTPase YlqF n=1 Tax=Fischerell... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.300coord: 3..51
e-value: 1.0E-5
score: 27.5
NoneNo IPR availablePANTHERPTHR45782:SF5DAR GTPASE 3, CHLOROPLASTICcoord: 4..51
NoneNo IPR availablePANTHERPTHR45782FAMILY NOT NAMEDcoord: 4..51

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig96370contigH-elongata_contig96370:163..315 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig96370.17027.1mRNA_H-elongata_contig96370.17027.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig96370 163..315 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig96370.17027.1 ID=prot_H-elongata_contig96370.17027.1|Name=mRNA_H-elongata_contig96370.17027.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=51bp
PTERYPGHIAKAERELQDYLKMVDVVIEVRDCRIPAATTHQLVPKWVGNR
R
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