prot_H-elongata_contig9636.17026.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig9636.17026.1
Unique Nameprot_H-elongata_contig9636.17026.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length98
Homology
BLAST of mRNA_H-elongata_contig9636.17026.1 vs. uniprot
Match: D8LFW5_ECTSI (Putative ubiquitin fusion-degradation protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFW5_ECTSI)

HSP 1 Score: 122 bits (307), Expect = 1.980e-30
Identity = 64/98 (65.31%), Postives = 78/98 (79.59%), Query Frame = 0
Query:    1 MMQNLIVAEGERVELRNIHPPPPGAFVRFRPHDEAFLSLATRQGPKALMEDALRRYTVLSEGVSILIFLLLLPPSIQHEGCNFYLDVMEIRTLDDSAP 98
            +MQNL+++EG RVELR+I  PP G+FVRF+PHDEAFL +A +QGPKALME ALRRY+VLSEG +IL+         QHEG NF+LDVME+RT D SAP
Sbjct:  107 LMQNLLLSEGGRVELRSILRPPAGSFVRFKPHDEAFLGVAAKQGPKALMEFALRRYSVLSEGATILV---------QHEGDNFFLDVMELRTFD-SAP 194          
BLAST of mRNA_H-elongata_contig9636.17026.1 vs. uniprot
Match: A0A6H5JNY9_9PHAE (RanBP2-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNY9_9PHAE)

HSP 1 Score: 73.9 bits (180), Expect = 2.840e-13
Identity = 40/96 (41.67%), Postives = 53/96 (55.21%), Query Frame = 0
Query:    1 MMQNLIVAEGERVELRNIHPPPPGAFVRFRPHDEAFLSLATRQGPKALMEDALRRYTVLSEGVSILIFLLLLPPSIQHEGCNFYLDVMEIRTLDDS 96
            +MQNL+++EG RVELR+I  PP G+FVRF+PHDE+FL +A +Q                                  HEG NF+LDV+E+RT D S
Sbjct:  108 LMQNLLLSEGGRVELRSILRPPAGSFVRFKPHDESFLGVAAKQ----------------------------------HEGDNFFLDVVELRTFDSS 169          
BLAST of mRNA_H-elongata_contig9636.17026.1 vs. uniprot
Match: A0A067D5J6_SAPPC (Uncharacterized protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067D5J6_SAPPC)

HSP 1 Score: 70.5 bits (171), Expect = 4.540e-12
Identity = 38/94 (40.43%), Postives = 58/94 (61.70%), Query Frame = 0
Query:    1 MMQNLIVAEGERVELRNIHPPPPGAFVRFRPHDEAFLSLATRQGPKALMEDALRRYTVLSEGVSILIFLLLLPPSIQHEGCNFYLDVMEIRTLD 94
            MMQNL+V EG R++L +    P G + RF+PH  AFL LA   GPK L+E A+R+Y+VLS G +I+I         ++    +++DV+ ++  D
Sbjct:   97 MMQNLLVDEGGRLQLESATNIPRGVYCRFQPHVGAFLDLAATLGPKILLESAMRKYSVLSVGETIVI---------EYGADKYFVDVVHVKPGD 181          
BLAST of mRNA_H-elongata_contig9636.17026.1 vs. uniprot
Match: A0A812TUZ3_9DINO (Ufd1 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812TUZ3_9DINO)

HSP 1 Score: 67.8 bits (164), Expect = 3.820e-11
Identity = 36/91 (39.56%), Postives = 52/91 (57.14%), Query Frame = 0
Query:    1 MMQNLIVAEGERVELRNIHPPPPGAFVRFRPHDEAFLSLATRQGPKALMEDALRRYTVLSEGVSILIFLLLLPPSIQHEGCNFYLDVMEIR 91
            MMQNL + +G R    ++   P G FVRF+PH   F+ LA   GP+ LME A++ Y+ LS G ++++         Q  G  F LDV+E+R
Sbjct:  106 MMQNLKIRDGGRAVFTSVRGMPKGTFVRFQPHTTEFIDLAAALGPRELMEHAMKTYSALSLGETLVV---------QCSGSMFKLDVLEVR 187          
BLAST of mRNA_H-elongata_contig9636.17026.1 vs. uniprot
Match: A0A329SVD9_9STRA (TRAF-type domain-containing protein n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329SVD9_9STRA)

HSP 1 Score: 67.8 bits (164), Expect = 4.070e-11
Identity = 40/91 (43.96%), Postives = 55/91 (60.44%), Query Frame = 0
Query:    1 MMQNLIVAEGERVELRNIHPPPPGAFVRFRPHDEAFLSLATRQGPKALMEDALRRYTVLSEGVSILIFLLLLPPSIQHEGCNFYLDVMEIR 91
            +MQNL VAEG  VE+ ++   P G + R +P   +FL LA   GPK LME ALRRY+VLS G +ILI         ++    +YL V+E++
Sbjct:  114 LMQNLGVAEGGTVEVTSVVNLPRGVYCRLQPEAMSFLDLAAEIGPKLLMETALRRYSVLSVGSTILI---------EYGSVQYYLRVVELK 195          
BLAST of mRNA_H-elongata_contig9636.17026.1 vs. uniprot
Match: T0RW44_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0RW44_SAPDV)

HSP 1 Score: 67.0 bits (162), Expect = 7.470e-11
Identity = 36/94 (38.30%), Postives = 56/94 (59.57%), Query Frame = 0
Query:    1 MMQNLIVAEGERVELRNIHPPPPGAFVRFRPHDEAFLSLATRQGPKALMEDALRRYTVLSEGVSILIFLLLLPPSIQHEGCNFYLDVMEIRTLD 94
            MMQNL+  EG R++L +    P G + R +PH  AFL LA   GPK L+E A+R+Y+VLS G +I+I         ++    +++DV+ ++  D
Sbjct:   63 MMQNLLCDEGGRLQLESATNIPRGVYCRLQPHVSAFLDLAATLGPKILLESAMRKYSVLSVGETIVI---------EYGADKYFVDVVHVKPGD 147          
BLAST of mRNA_H-elongata_contig9636.17026.1 vs. uniprot
Match: K3WD15_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WD15_GLOUD)

HSP 1 Score: 59.7 bits (143), Expect = 2.590e-9
Identity = 35/91 (38.46%), Postives = 53/91 (58.24%), Query Frame = 0
Query:    1 MMQNLIVAEGERVELRNIHPPPPGAFVRFRPHDEAFLSLATRQGPKALMEDALRRYTVLSEGVSILIFLLLLPPSIQHEGCNFYLDVMEIR 91
            MMQNL V EG  V + N H    G + R +P +  FL+LA   GPK LME+A+RRY+VLS   +I+I         ++    +++ V+E++
Sbjct:   21 MMQNLHVDEGGFVLITNAHDISRGIYCRLQPEETHFLTLAADVGPKLLMENAMRRYSVLSVNETIVI---------EYGATRYFVRVVELK 102          
BLAST of mRNA_H-elongata_contig9636.17026.1 vs. uniprot
Match: D0NPR1_PHYIT (Ubiquitin fusion degradation protein, putative n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0NPR1_PHYIT)

HSP 1 Score: 62.4 bits (150), Expect = 2.810e-9
Identity = 34/67 (50.75%), Postives = 45/67 (67.16%), Query Frame = 0
Query:    1 MMQNLIVAEGERVELRNIHPPPPGAFVRFRPHDEAFLSLATRQGPKALMEDALRRYTVLSEGVSILI 67
            +MQNL V EG+ V + ++   P G + RF+P   +FL LA   GPK LME ALRRY+VLS G +I+I
Sbjct:   72 LMQNLRVPEGDWVVVTSVVNLPRGIYCRFQPESTSFLDLAAEIGPKLLMETALRRYSVLSMGSTIVI 138          
BLAST of mRNA_H-elongata_contig9636.17026.1 vs. uniprot
Match: A0A833W5R3_PHYIN (Ubiquitin fusion degradation protein UFD1 n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833W5R3_PHYIN)

HSP 1 Score: 62.4 bits (150), Expect = 3.170e-9
Identity = 34/67 (50.75%), Postives = 45/67 (67.16%), Query Frame = 0
Query:    1 MMQNLIVAEGERVELRNIHPPPPGAFVRFRPHDEAFLSLATRQGPKALMEDALRRYTVLSEGVSILI 67
            +MQNL V EG+ V + ++   P G + RF+P   +FL LA   GPK LME ALRRY+VLS G +I+I
Sbjct:   41 LMQNLRVPEGDWVVVTSVVNLPRGIYCRFQPESTSFLDLAAEIGPKLLMETALRRYSVLSMGSTIVI 107          
BLAST of mRNA_H-elongata_contig9636.17026.1 vs. uniprot
Match: W2VYC0_PHYPR (TRAF-type domain-containing protein n=1 Tax=Phytophthora parasitica CJ01A1 TaxID=1317063 RepID=W2VYC0_PHYPR)

HSP 1 Score: 61.2 bits (147), Expect = 8.100e-9
Identity = 34/67 (50.75%), Postives = 44/67 (65.67%), Query Frame = 0
Query:    1 MMQNLIVAEGERVELRNIHPPPPGAFVRFRPHDEAFLSLATRQGPKALMEDALRRYTVLSEGVSILI 67
            +MQNL V EG  V + ++   P GA+ R +P   +FL LA   GPK LME ALRRY+VLS G +I+I
Sbjct:   71 LMQNLGVREGGSVVVTSVVSLPRGAYCRLQPETTSFLDLAAEIGPKLLMETALRRYSVLSTGSTIVI 137          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig9636.17026.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LFW5_ECTSI1.980e-3065.31Putative ubiquitin fusion-degradation protein n=1 ... [more]
A0A6H5JNY9_9PHAE2.840e-1341.67RanBP2-type domain-containing protein n=1 Tax=Ecto... [more]
A0A067D5J6_SAPPC4.540e-1240.43Uncharacterized protein n=1 Tax=Saprolegnia parasi... [more]
A0A812TUZ3_9DINO3.820e-1139.56Ufd1 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=23... [more]
A0A329SVD9_9STRA4.070e-1143.96TRAF-type domain-containing protein n=1 Tax=Phytop... [more]
T0RW44_SAPDV7.470e-1138.30Uncharacterized protein n=1 Tax=Saprolegnia diclin... [more]
K3WD15_GLOUD2.590e-938.46Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
D0NPR1_PHYIT2.810e-950.75Ubiquitin fusion degradation protein, putative n=1... [more]
A0A833W5R3_PHYIN3.170e-950.75Ubiquitin fusion degradation protein UFD1 n=1 Tax=... [more]
W2VYC0_PHYPR8.100e-950.75TRAF-type domain-containing protein n=1 Tax=Phytop... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.10.330.10coord: 24..97
e-value: 1.6E-8
score: 36.4
NoneNo IPR availablePANTHERPTHR12555:SF13UBIQUITIN RECOGNITION FACTOR IN ER-ASSOCIATED DEGRADATION PROTEIN 1coord: 1..91
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..55
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 77..98
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 56..76
IPR004854Ubiquitin fusion degradation protein Ufd1-likePFAMPF03152UFD1coord: 1..91
e-value: 1.7E-10
score: 40.6
IPR004854Ubiquitin fusion degradation protein Ufd1-likePANTHERPTHR12555UBIQUITIN FUSION DEGRADATON PROTEIN 1coord: 1..91

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig9636contigH-elongata_contig9636:189..933 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig9636.17026.1mRNA_H-elongata_contig9636.17026.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig9636 168..933 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig9636.17026.1 ID=prot_H-elongata_contig9636.17026.1|Name=mRNA_H-elongata_contig9636.17026.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=98bp
MMQNLIVAEGERVELRNIHPPPPGAFVRFRPHDEAFLSLATRQGPKALME
DALRRYTVLSEGVSILIFLLLLPPSIQHEGCNFYLDVMEIRTLDDSAP
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004854Ufd1-like