prot_H-elongata_contig96250.17020.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig96250.17020.1
Unique Nameprot_H-elongata_contig96250.17020.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length63
Homology
BLAST of mRNA_H-elongata_contig96250.17020.1 vs. uniprot
Match: A0A6H5KA14_9PHAE (Dimer_Tnp_hAT domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KA14_9PHAE)

HSP 1 Score: 80.5 bits (197), Expect = 3.370e-16
Identity = 42/61 (68.85%), Postives = 49/61 (80.33%), Query Frame = 0
Query:    3 SWWDEHQATLRQFLLRELVTRVLCVPASSASSERLFSKAGFTLTKKRSKFKGPRVTQLVTV 63
            +WWD+H+AT    LLREL  R+LCVPASSA+SERLFSKAG TLTK+RS   G RV QLVT+
Sbjct:  504 TWWDQHKATFP--LLRELSHRILCVPASSAASERLFSKAGLTLTKQRSLLAGNRVAQLVTL 562          
BLAST of mRNA_H-elongata_contig96250.17020.1 vs. uniprot
Match: D8LDT4_ECTSI (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDT4_ECTSI)

HSP 1 Score: 60.8 bits (146), Expect = 2.810e-9
Identity = 30/60 (50.00%), Postives = 39/60 (65.00%), Query Frame = 0
Query:    4 WWDEHQATLRQFLLRELVTRVLCVPASSASSERLFSKAGFTLTKKRSKFKGPRVTQLVTV 63
            WW++ Q       LRELV RVLCVPA SASS+R+FSK G     KR++ +G RV   +T+
Sbjct:  843 WWEQEQQRWSFPFLRELVMRVLCVPACSASSKRVFSKTGLVDNSKRARLRGSRVAPRLTI 902          
BLAST of mRNA_H-elongata_contig96250.17020.1 vs. uniprot
Match: A0A6H5KHJ9_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHJ9_9PHAE)

HSP 1 Score: 57.8 bits (138), Expect = 3.380e-8
Identity = 30/60 (50.00%), Postives = 38/60 (63.33%), Query Frame = 0
Query:    4 WWDEHQATLRQFLLRELVTRVLCVPASSASSERLFSKAGFTLTKKRSKFKGPRVTQLVTV 63
            WW++ Q       LR+L  RVLCVPA SASS+RLF K G     KR++ +G RV Q +TV
Sbjct:  409 WWEQGQQRWSFPSLRQLAMRVLCVPACSASSKRLFFKTGVVGNSKRARLRGSRVAQRLTV 468          
BLAST of mRNA_H-elongata_contig96250.17020.1 vs. uniprot
Match: A0A1A8SIR0_9TELE (Dimer_Tnp_hAT domain-containing protein (Fragment) n=1 Tax=Nothobranchius rachovii TaxID=451742 RepID=A0A1A8SIR0_9TELE)

HSP 1 Score: 51.6 bits (122), Expect = 5.520e-7
Identity = 28/58 (48.28%), Postives = 36/58 (62.07%), Query Frame = 0
Query:    4 WWDEHQATLRQFLLRELVTRVLCVPASSASSERLFSKAGFTLTKKRSKFKGPRVTQLV 61
            WW EH+ T     L +L  R L V ASS  +ER+FSKAG  L+K+RS+ KG  V  L+
Sbjct:   34 WWQEHEQTFPA--LSKLAVRYLGVVASSVPAERIFSKAGEVLSKRRSRLKGKTVNMLL 89          
BLAST of mRNA_H-elongata_contig96250.17020.1 vs. uniprot
Match: UPI001894F835 (E3 SUMO-protein ligase ZBED1-like n=2 Tax=Rhipicephalus sanguineus TaxID=34632 RepID=UPI001894F835)

HSP 1 Score: 53.1 bits (126), Expect = 1.430e-6
Identity = 27/58 (46.55%), Postives = 37/58 (63.79%), Query Frame = 0
Query:    4 WWDEHQATLRQFLLRELVTRVLCVPASSASSERLFSKAGFTLTKKRSKFKGPRVTQLV 61
            WW +H++   +  L EL  + +C+PASSASSER+FS AG  +T KRS      V+ LV
Sbjct:  332 WWKDHESKFPR--LAELAKKYMCIPASSASSERVFSSAGNIITAKRSSLLPENVSSLV 387          
BLAST of mRNA_H-elongata_contig96250.17020.1 vs. uniprot
Match: UPI0018935EA0 (E3 SUMO-protein ligase ZBED1-like n=1 Tax=Rhipicephalus sanguineus TaxID=34632 RepID=UPI0018935EA0)

HSP 1 Score: 53.1 bits (126), Expect = 1.450e-6
Identity = 27/58 (46.55%), Postives = 37/58 (63.79%), Query Frame = 0
Query:    4 WWDEHQATLRQFLLRELVTRVLCVPASSASSERLFSKAGFTLTKKRSKFKGPRVTQLV 61
            WW +H++   +  L EL  + +C+PASSASSER+FS AG  +T KRS      V+ LV
Sbjct:  431 WWKDHESKFPR--LAELAKKYMCIPASSASSERVFSSAGNIITAKRSSLLPENVSSLV 486          
BLAST of mRNA_H-elongata_contig96250.17020.1 vs. uniprot
Match: A0A3P8NTG9_ASTCA (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Astatotilapia calliptera TaxID=8154 RepID=A0A3P8NTG9_ASTCA)

HSP 1 Score: 51.6 bits (122), Expect = 5.010e-6
Identity = 27/58 (46.55%), Postives = 36/58 (62.07%), Query Frame = 0
Query:    4 WWDEHQATLRQFLLRELVTRVLCVPASSASSERLFSKAGFTLTKKRSKFKGPRVTQLV 61
            WW EH+ T     L  LV R L + ASS  +ER+FSKAG  ++KKRS+ +G  V  L+
Sbjct:  299 WWQEHEQTFPS--LSRLVVRYLGIVASSVPAERIFSKAGEVVSKKRSRLRGKTVNMLL 354          
BLAST of mRNA_H-elongata_contig96250.17020.1 vs. uniprot
Match: A0A1E1XF33_9ACAR (Putative hoana1 (Fragment) n=1 Tax=Amblyomma aureolatum TaxID=187763 RepID=A0A1E1XF33_9ACAR)

HSP 1 Score: 51.6 bits (122), Expect = 5.090e-6
Identity = 25/46 (54.35%), Postives = 32/46 (69.57%), Query Frame = 0
Query:    4 WWDEHQATLRQFLLRELVTRVLCVPASSASSERLFSKAGFTLTKKR 49
            WW  HQ T  Q  L  LV +VLC+PA+SASSER FS AG+ + ++R
Sbjct:  531 WWRSHQNTFPQ--LAALVRKVLCIPATSASSERNFSAAGYVMNERR 574          
BLAST of mRNA_H-elongata_contig96250.17020.1 vs. uniprot
Match: A0A2S2PKJ7_SCHGA (Zinc finger BED domain-containing protein 1 (Fragment) n=1 Tax=Schizaphis graminum TaxID=13262 RepID=A0A2S2PKJ7_SCHGA)

HSP 1 Score: 50.4 bits (119), Expect = 5.760e-6
Identity = 25/58 (43.10%), Postives = 36/58 (62.07%), Query Frame = 0
Query:    4 WWDEHQATLRQFLLRELVTRVLCVPASSASSERLFSKAGFTLTKKRSKFKGPRVTQLV 61
            WW EH+       + ++   +LC+PASSASSER+FS AG  +T KR++     V+ LV
Sbjct:  107 WWKEHETIYPT--IAKVAKNMLCIPASSASSERVFSTAGNIVTSKRNRLNAKNVSTLV 162          
BLAST of mRNA_H-elongata_contig96250.17020.1 vs. uniprot
Match: A0A8J9UI59_BRAAE (Hypothetical protein n=1 Tax=Brassicogethes aeneus TaxID=1431903 RepID=A0A8J9UI59_BRAAE)

HSP 1 Score: 50.8 bits (120), Expect = 9.480e-6
Identity = 26/58 (44.83%), Postives = 38/58 (65.52%), Query Frame = 0
Query:    4 WWDEHQATLRQFLLRELVTRVLCVPASSASSERLFSKAGFTLTKKRSKFKGPRVTQLV 61
            WW E ++   +  L +L  + LCV A+S  SER+FSKAG T+T +R++  G +V QLV
Sbjct:  446 WWQERKSIYPR--LYQLAVKKLCVVATSVPSERIFSKAGQTVTDRRNRLSGEKVRQLV 501          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig96250.17020.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KA14_9PHAE3.370e-1668.85Dimer_Tnp_hAT domain-containing protein n=2 Tax=Ec... [more]
D8LDT4_ECTSI2.810e-950.00Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
A0A6H5KHJ9_9PHAE3.380e-850.00Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
A0A1A8SIR0_9TELE5.520e-748.28Dimer_Tnp_hAT domain-containing protein (Fragment)... [more]
UPI001894F8351.430e-646.55E3 SUMO-protein ligase ZBED1-like n=2 Tax=Rhipicep... [more]
UPI0018935EA01.450e-646.55E3 SUMO-protein ligase ZBED1-like n=1 Tax=Rhipicep... [more]
A0A3P8NTG9_ASTCA5.010e-646.55Dimer_Tnp_hAT domain-containing protein n=1 Tax=As... [more]
A0A1E1XF33_9ACAR5.090e-654.35Putative hoana1 (Fragment) n=1 Tax=Amblyomma aureo... [more]
A0A2S2PKJ7_SCHGA5.760e-643.10Zinc finger BED domain-containing protein 1 (Fragm... [more]
A0A8J9UI59_BRAAE9.480e-644.83Hypothetical protein n=1 Tax=Brassicogethes aeneus... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008906HAT, C-terminal dimerisation domainPFAMPF05699Dimer_Tnp_hATcoord: 3..61
e-value: 1.0E-9
score: 38.0
NoneNo IPR availablePANTHERPTHR47611FAMILY NOT NAMEDcoord: 4..61
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 3..61

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig96250contigH-elongata_contig96250:1910..2098 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig96250.17020.1mRNA_H-elongata_contig96250.17020.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig96250 1910..2113 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig96250.17020.1 ID=prot_H-elongata_contig96250.17020.1|Name=mRNA_H-elongata_contig96250.17020.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=63bp
MGSWWDEHQATLRQFLLRELVTRVLCVPASSASSERLFSKAGFTLTKKRS
KFKGPRVTQLVTV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008906HATC_C_dom
IPR012337RNaseH-like_sf