prot_H-elongata_contig96179.17013.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig96179.17013.1
Unique Nameprot_H-elongata_contig96179.17013.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length137
Homology
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BLAST of mRNA_H-elongata_contig96179.17013.1 vs. uniprot
Match: D8LJV7_ECTSI (Kinesin-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJV7_ECTSI)

HSP 1 Score: 194 bits (492), Expect = 1.010e-54
Identity = 96/134 (71.64%), Postives = 111/134 (82.84%), Query Frame = 0 
Query:    1 QVVTDYTNVNTENSSVRVFVRARPPDPNLIFEEDDANVEDNKFQNPLQATLAGLSPKSNSGALSPSPNTTTSAFISNFPDNPKKICIKDPTAQGHSKHHGETYFSFDRVFWTDCSQDNVFQ------VNRLIGG 128
            QVVTDYT+VNTENSSV V+VRARPPDP+   ++DDA+VED KFQNPLQATLAGLSPKSNSG  S +P  T+SAFI+NFPDNPKKICIKDP  QG +KHHGE YFSFDRVFWT+CSQ+ +FQ      V  ++GG
Sbjct:    4 QVVTDYTDVNTENSSVCVYVRARPPDPSWSPQDDDASVED-KFQNPLQATLAGLSPKSNSGGQSATPQATSSAFITNFPDNPKKICIKDPAVQGSAKHHGEIYFSFDRVFWTECSQEEIFQAVAKPQVENILGG 136
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BLAST of mRNA_H-elongata_contig96179.17013.1 vs. uniprot
Match: A0A6H5K5P9_9PHAE (Kinesin motor domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5P9_9PHAE)

HSP 1 Score: 116 bits (290), Expect = 1.780e-27
Identity = 51/69 (73.91%), Postives = 58/69 (84.06%), Query Frame = 0 
Query:   53 GLSPKSNSGALSPSPNTTTSAFISNFPDNPKKICIKDPTAQGHSKHHGETYFSFDRVFWTDCSQDNVFQ 121
            GLSPK NSG  S +P  T+SAFI+NFPDNPKKICIKDP  QG +KHHGE YFSFDRVFWT+CSQ+ +FQ
Sbjct:   20 GLSPKGNSGGQSATPQATSSAFITNFPDNPKKICIKDPAVQGSAKHHGEIYFSFDRVFWTECSQEEIFQ 88
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig96179.17013.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LJV7_ECTSI1.010e-5471.64Kinesin-like protein n=1 Tax=Ectocarpus siliculosu... [more]
A0A6H5K5P9_9PHAE1.780e-2773.91Kinesin motor domain-containing protein n=1 Tax=Ec... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001752Kinesin motor domainPROSITEPS50067KINESIN_MOTOR_2coord: 15..136
score: 9.134
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 7..122

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig96179contigH-elongata_contig96179:611..1157 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig96179.17013.1mRNA_H-elongata_contig96179.17013.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig96179 611..1367 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig96179.17013.1 ID=prot_H-elongata_contig96179.17013.1|Name=mRNA_H-elongata_contig96179.17013.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=137bp
QVVTDYTNVNTENSSVRVFVRARPPDPNLIFEEDDANVEDNKFQNPLQAT
LAGLSPKSNSGALSPSPNTTTSAFISNFPDNPKKICIKDPTAQGHSKHHG
ETYFSFDRVFWTDCSQDNVFQVNRLIGGDSNVNLIV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001752Kinesin_motor_dom
IPR027417P-loop_NTPase