prot_H-elongata_contig9610.17007.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig9610.17007.1
Unique Name	prot_H-elongata_contig9610.17007.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	266

Homology

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BLAST of mRNA_H-elongata_contig9610.17007.1 vs. uniprot
Match: A0A6H5KCC9_9PHAE (PSII_BNR domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KCC9_9PHAE)

HSP 1 Score: 427 bits (1098), Expect = 3.400e-147
Identity = 208/260 (80.00%), Postives = 236/260 (90.77%), Query Frame = 0

Query:    6 QVSLYDDEIFVVGKPPILLHSKDGGNSWERVSLNPKLPGEPSNIVAMGSGKAEMTTSTGAIYYTKNAGLNFYAQVKETVDATLNRISSSGVSGASYFSGSIIGTTRAEDDGSYLAVSSRGNFYLTWSPGQDFWTPHNRGASRRIQNMGFIRGRAADGLWMTLNGGVMQRTTEKPDANTDAKFTDVPIKSGGYGIIDVAWKDDSEAWAVGGGGSLWYSIDGGKSFKFSSGATDVVATNLYNVKFFGGDKGFALGAEGVLLK 265
            +VS+Y+DEIF++GKPPILLHSKD G +WERV L+PKLPGEPSNIVA+G  KAEMTTS+GAIYYTKNAG+N+ AQVKETVDATLNRISSSGVSGASYF+GSIIGTTRAED GSYLAVSSRGNFYLTWSPGQDFW PHNRG SRRIQNMGF+RGRAA+GLWMTLNGG MQ +   P+   D  F++  IKSGGYGIIDVAWK+D+EAWAVGGGGSLWYS DGG++FKFSSGAT++ A NLY+VKFFGGDKGFA+G++GVLLK
Sbjct:  160 KVSMYNDEIFIIGKPPILLHSKDAGKTWERVPLSPKLPGEPSNIVALGGAKAEMTTSSGAIYYTKNAGMNWSAQVKETVDATLNRISSSGVSGASYFTGSIIGTTRAED-GSYLAVSSRGNFYLTWSPGQDFWIPHNRGTSRRIQNMGFVRGRAAEGLWMTLNGGAMQMSKTLPEGTNDPVFSETAIKSGGYGIIDVAWKNDNEAWAVGGGGSLWYSTDGGETFKFSSGATNIGA-NLYDVKFFGGDKGFAIGSDGVLLK 417

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BLAST of mRNA_H-elongata_contig9610.17007.1 vs. uniprot
Match: A0A836CNS8_9STRA (Photosynthesis system II assembly factor YCF48-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNS8_9STRA)

HSP 1 Score: 369 bits (946), Expect = 3.580e-124
Identity = 183/262 (69.85%), Postives = 212/262 (80.92%), Query Frame = 0

Query:    6 QVSLYDDEIFVVGKPPILLHSKDGGNSWERVSLNPKLPGEPSNIVAMGSGKAEMTTSTGAIYYTKNAGLNFYAQVKETVDATLNRISSSGVSGASYFSGSIIGTTRAEDDGSYLAVSSRGNFYLTWSPGQDFWTPHNRGASRRIQNMGFIRGRAADGLWMTLNGGVMQ--RTTEKPDANTDAKFTDVPIKSGGYGIIDVAWKDDSEAWAVGGGGSLWYSIDGGKSFKFSSGATDVVATNLYNVKFFGGDKGFALGAEGVLLK 265
            +VS  D E F++GKPPILLH+KD G SWERV L+PKLPGEPSNIVA+GSGKAEMTTSTGA+YYT NAGLN+ AQVKET+DATLNRISSSGVSGASYF+GSIIGT R +  G+YLAVSSRGNFYLTW PGQDFW PHNRG SRRIQNMGF+ G    G+WMTLNGGVMQ  ++ +     TD  F  V IK+GGYGIID AWKD  EAWAVGGGG+LW S+DGGK++K+   A D +  NLY +KFF  + GF LG++GVLL+
Sbjct:  154 KVSFVDGEAFIIGKPPILLHTKDKGESWERVPLSPKLPGEPSNIVALGSGKAEMTTSTGAVYYTNNAGLNWKAQVKETIDATLNRISSSGVSGASYFTGSIIGTLR-DKSGAYLAVSSRGNFYLTWQPGQDFWIPHNRGTSRRIQNMGFVEGDINKGVWMTLNGGVMQISKSGDSLSVATDPTFEPVDIKTGGYGIIDAAWKDAKEAWAVGGGGNLWVSMDGGKTYKYDKVA-DKIPGNLYTIKFFSPESGFVLGSDGVLLR 413

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BLAST of mRNA_H-elongata_contig9610.17007.1 vs. uniprot
Match: A0A7S2XVG6_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XVG6_9STRA)

HSP 1 Score: 347 bits (889), Expect = 1.460e-115
Identity = 173/266 (65.04%), Postives = 209/266 (78.57%), Query Frame = 0

Query:    1 TFACVQVSLYDDEIFVVGKPPILLHSKDGGNSWERVSLNPKLPGEPSNIVAMGSGKAEMTTSTGAIYYTKNAGLNFYAQVKETVDATLNRISSSGVSGASYFSGSIIGTTRAEDDGSYLAVSSRGNFYLTWSPGQDFWTPHNRGASRRIQNMGFIRGRAADGLWMTLNGGVMQRTTEKPD-ANTDAKFTDVPIKSGGYGIIDVAWKDDSEAWAVGGGGSLWYSIDGGKSFKFSSGATDVVATNLYNVKFFGGDKGFALGAEGVLLK 265
            T+   +VS  D E +++GKP ILLHSKD G +WER+ L+PKLPGEP +IVA G+  AEMTTS GAIYYT NA  NF AQVKET+DATLNRISSSGVSGASYF+GSIIGT R +  G+YLAVSSRGNFYLTW PG DFW PHNRG SRRIQ MGF++   + GLWMTLNGGV+Q +    D +N+D +F    IK+GGYGI DVAWKD++E WAVGGGG+++ S+DGGK+F F++ A D+   NLYNVKFF   KGF LG++G+LLK
Sbjct:  148 TYRFEKVSFLDGEAWIIGKPSILLHSKDEGRNWERIPLSPKLPGEPCDIVATGAETAEMTTSAGAIYYTSNAARNFKAQVKETIDATLNRISSSGVSGASYFTGSIIGTIR-DSTGAYLAVSSRGNFYLTWQPGDDFWIPHNRGTSRRIQQMGFVQDDLSKGLWMTLNGGVLQISKTGQDVSNSDVEFKAANIKTGGYGITDVAWKDENEVWAVGGGGTMFVSVDGGKNFVFNNAADDIPG-NLYNVKFFKNGKGFVLGSDGILLK 411

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BLAST of mRNA_H-elongata_contig9610.17007.1 vs. uniprot
Match: A0A7R9U3Z4_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U3Z4_9STRA)

HSP 1 Score: 344 bits (883), Expect = 7.290e-115
Identity = 179/267 (67.04%), Postives = 207/267 (77.53%), Query Frame = 0

Query:    1 TFACVQVSLYDDEIFVVGKPPILLHSKDGGNSWERVSLNPKLPGEPSNIVAMGSGKAEMTTSTGAIYYTKNAGLNFYAQVKETVDATLNRISSSGVSGASYFSGSIIGTTRAEDDGSYLAVSSRGNFYLTWSPGQDFWTPHNRGASRRIQNMGFIRGRAADGLWMTLNGGVMQRTTEKPD-ANTDA-KFTDVPIKSGGYGIIDVAWKDDSEAWAVGGGGSLWYSIDGGKSFKFSSGATDVVATNLYNVKFFGGDKGFALGAEGVLLK 265
            T+   QVSL   E +++GKP ILLH+KD G SWERV L+PKLPGEPS I+ +GSG AEMTTSTGAIYYT N GLN+ AQVKET+DATLNRISSSGV GASYFSGSI  T R +D G YLAVSSRGNFYLTW PGQDFW PHNRG SRRIQNMGFI+G   +G+WM+LNGG +Q T   PD A+TD   F  V + SGGYGIID+AWK+D E WAVGG GS++ S DGG SF F   A D +  NLY+V FFG D+GF LG++GVLL+
Sbjct:  134 TYRFEQVSLNGGEAYIIGKPAILLHTKDSGKSWERVPLSPKLPGEPSTIIGLGSGNAEMTTSTGAIYYTTNGGLNWKAQVKETIDATLNRISSSGVKGASYFSGSIALTHR-DDQGKYLAVSSRGNFYLTWEPGQDFWIPHNRGTSRRIQNMGFIKGIQDNGVWMSLNGGEVQLTATAPDMASTDLIDFKKVNLNSGGYGIIDLAWKNDREVWAVGGSGSIFVSRDGGGSFSFDKSA-DKIPGNLYSVSFFG-DQGFVLGSDGVLLR 397

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BLAST of mRNA_H-elongata_contig9610.17007.1 vs. uniprot
Match: A0A7S3XNC3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XNC3_HETAK)

HSP 1 Score: 337 bits (865), Expect = 1.340e-111
Identity = 167/262 (63.74%), Postives = 204/262 (77.86%), Query Frame = 0

Query:    6 QVSLYDDEIFVVGKPPILLHSKDGGNSWERVSLNPKLPGEPSNIVAMGSGKAEMTTSTGAIYYTKNAGLNFYAQVKETVDATLNRISSSGVSGASYFSGSIIGTTRAEDDGSYLAVSSRGNFYLTWSPGQDFWTPHNRGASRRIQNMGFIRGRAADGLWMTLNGGVMQRTTEKPDAN--TDAKFTDVPIKSGGYGIIDVAWKDDSEAWAVGGGGSLWYSIDGGKSFKFSSGATDVVATNLYNVKFFGGDKGFALGAEGVLLK 265
            +VS  D E +++GKPPILLH++D G SWER+ L+PKLPGEPS I+A G+ +AEMTTSTGAIYYT N   N+ AQ+KET+DATLNR+SSSGVSGAS+FSG+I    R + +G+YLAVSSRGNFYLTW PGQDFW PHNRG  RRIQNMGFI+    +G+WM+LNGG++Q T    + N   DAKF D  IKSGGYGI+D  WKD+ E WAVGGGG+++YS DGG  FKF S A D +  NLY  KFFG +KGF LG++GVLL+
Sbjct:  177 KVSFLDGEAWIIGKPPILLHTRDDGKSWERIPLSPKLPGEPSGIIATGNEQAEMTTSTGAIYYTGNQARNWKAQLKETIDATLNRVSSSGVSGASFFSGTINDCKR-DVNGNYLAVSSRGNFYLTWVPGQDFWIPHNRGTPRRIQNMGFIQDDIKNGVWMSLNGGLLQLTEPGQEINGINDAKFKDAKIKSGGYGILDCTWKDEKEVWAVGGGGTMYYSRDGGNEFKFDSSA-DKIPGNLYTCKFFGPNKGFVLGSDGVLLR 436

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BLAST of mRNA_H-elongata_contig9610.17007.1 vs. uniprot
Match: A0A7S2S971_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S971_9STRA)

HSP 1 Score: 327 bits (839), Expect = 1.870e-107
Identity = 165/260 (63.46%), Postives = 207/260 (79.62%), Query Frame = 0

Query:    7 VSLYDDEIFVVGKPPILLHSKDGGNSWERVSLNPKLPGEPSNIVAMGSGKAEMTTSTGAIYYTKNAGLNFYAQVKETVDATLNRISSSGVSGASYFSGSIIGTTRAEDDGSYLAVSSRGNFYLTWSPGQDFWTPHNRGASRRIQNMGFIRGRAADGLWMTLNGGVMQRTTEKPDANT-DAKFTDVPIKSGGYGIIDVAWKDDSEAWAVGGGGSLWYSIDGGKSFKFSSGATDVVATNLYNVKFFGGDKGFALGAEGVLLK 265
            VS  ++E +++GKP ILLHSKD G +WERV L+PKLPGEP+ IVA+G GKAEMTTSTGAIYYT+NAG N+ AQVKET+DATLNR+SSSGVSGASYF+GSI    R +  GSYLAVSSRGNFYLT+ PG +FW PHNRG SRRIQ+MGF   +  +GLWM+LNGG+++ + +  D N+ + +F    IK+GGYGIIDVAW++ +E WAVGGGG++  S DGGK+FKF + A D+   NLY+VKFF  D GF LG++GVLL+
Sbjct:  197 VSFENNEAWIIGKPAILLHSKDAGKNWERVPLSPKLPGEPNGIVALGPGKAEMTTSTGAIYYTENAGRNWKAQVKETIDATLNRVSSSGVSGASYFTGSISSIER-DSSGSYLAVSSRGNFYLTYRPGDEFWIPHNRGTSRRIQSMGFANEKLEEGLWMSLNGGLLEVSNKNTDLNSQEPEFDPSSIKTGGYGIIDVAWRNKNEVWAVGGGGTMHVSKDGGKTFKFDNSADDIPG-NLYSVKFFK-DTGFVLGSDGVLLR 453

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BLAST of mRNA_H-elongata_contig9610.17007.1 vs. uniprot
Match: A0A7S2SCF7_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2SCF7_9STRA)

HSP 1 Score: 324 bits (831), Expect = 5.290e-107
Identity = 164/268 (61.19%), Postives = 207/268 (77.24%), Query Frame = 0

Query:    1 TFACVQVSLYDDEIFVVGKPPILLHSKDGGNSWERVSLNPKLPGEPSNIVAMGSGKAEMTTSTGAIYYTKNAGLNFYAQVKETVDATLNRISSSGVSGASYFSGSIIGTTRAEDDGSYLAVSSRGNFYLTWSPGQDFWTPHNRGASRRIQNMGFIRGRAADGLWMTLNGGVMQRTTEKPDANTDA-KFTDVPIKSGGYGIIDVAWKDDSEAWAVGGGGSLWYSIDGGKSFKFSSGATDVVATNLYNVKFFG--GDKGFALGAEGVLLK 265
            T+    VS  D E +V+GKP +LLH+KD G SWER+ L+PKLPGEPS+I+A+G  KAEMTTS+GA+Y T NAG N+ AQVKET+DATLNRISSSGVSGASYF+GSII   R +DDG+YLAVSSRGNF+LTW PGQDFW PHNRG SRRIQNMGF+ G    GLWMTLNGG +  + + PD + DA +F +  IK+GGYG+ DVAW++++EAWAVGG  +++ S+DGGK F F   A +    NLY+V+FF    + G+ALG+ G+LL+
Sbjct:  134 TYRFQVVSFKDGEGWVLGKPALLLHTKDSGKSWERIPLSPKLPGEPSSILALGPSKAEMTTSSGAVYVTDNAGRNWKAQVKETIDATLNRISSSGVSGASYFTGSIINQVR-DDDGAYLAVSSRGNFFLTWEPGQDFWIPHNRGTSRRIQNMGFVEGDIHKGLWMTLNGGKVFVSPKDPDLSQDAFEFFEADIKTGGYGVTDVAWRNENEAWAVGGSNTMYVSMDGGKKFNFDKSANNFPG-NLYSVRFFKEYNNMGWALGSNGMLLR 399

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BLAST of mRNA_H-elongata_contig9610.17007.1 vs. uniprot
Match: A0A7S2UBA7_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UBA7_9STRA)

HSP 1 Score: 320 bits (820), Expect = 2.860e-105
Identity = 163/268 (60.82%), Postives = 202/268 (75.37%), Query Frame = 0

Query:    1 TFACVQVSLYDDEIFVVGKPPILLHSKDGGNSWERVSLNPKLPGEPSNIVAMGSGKAEMTTSTGAIYYTKNAGLNFYAQVKETVDATLNRISSSGVSGASYFSGSIIGTTRAEDDGSYLAVSSRGNFYLTWSPGQDFWTPHNRGASRRIQNMGFIRGRAADGLWMTLNGGVMQRTTEKPDANTDA-KFTDVPIKSGGYGIIDVAWKDDSEAWAVGGGGSLWYSIDGGKSFKFSSGATDVVATNLYNVKFFG--GDKGFALGAEGVLLK 265
            T+    VS  D E +V+GKP ++LH+KD G +WER+ L+PKLPGEP++I+A G GKAEMTTS+GA+Y T+NAG N+ AQVKET+DATLNRISSSGVSGASYFSGSII   R +D+G+YLAVSSRGNF+LTW PGQDFW PHNRG SRRIQ+MGF+ G    GLWMTLNGG +    +  D   D   F +  IK+GGYGI DVAW++  E WAVGG  +++ S DGGKSFKF   A ++   NLYNVKFF    + G+A+G+ G+LLK
Sbjct:  139 TYRFQVVSFQDGEGWVLGKPTLMLHTKDSGKTWERIPLSPKLPGEPTSILAKGPGKAEMTTSSGAVYVTENAGRNWKAQVKETIDATLNRISSSGVSGASYFSGSIINQVR-DDEGAYLAVSSRGNFFLTWEPGQDFWIPHNRGQSRRIQSMGFVEGDIHKGLWMTLNGGKLLVANKDIDLKKDDFPFVEADIKTGGYGITDVAWRNTDEVWAVGGSNTMYVSFDGGKSFKFDKSANNIPG-NLYNVKFFKQFSNAGWAVGSNGLLLK 404

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BLAST of mRNA_H-elongata_contig9610.17007.1 vs. uniprot
Match: K0SVN6_THAOC (PSII_BNR domain-containing protein (Fragment) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SVN6_THAOC)

HSP 1 Score: 321 bits (822), Expect = 1.740e-104
Identity = 162/261 (62.07%), Postives = 204/261 (78.16%), Query Frame = 0

Query:    7 VSLYDDEIFVVGKPPILLHSKDGGNSWERVSLNPKLPGEPSNIVAMGSGKAEMTTSTGAIYYTKNAGLNFYAQVKETVDATLNRISSSGVSGASYFSGSIIGTTRAEDDGSYLAVSSRGNFYLTWSPGQDFWTPHNRGASRRIQNMGFIRGRAADGLWMTLNGGVMQRTTEKPDANTDA-KFTDVPIKSGGYGIIDVAWKDDSEAWAVGGGGSLWYSIDGGKSFKFSSGATDVVATNLYNVKFFG--GDKGFALGAEGVLL 264
            VS  D E +V+GKP +LLH+KDGG SWER+ L+PKLPGEP+ I+A+G  +AEM TS+GA+Y T+NAG N+ AQVKET+DATLNRISSSGVSGASYF+GSI+   R + DGSYLAVSSRGNF+LTW PGQ+FW PHNRG  RRIQNMGF+RG   +G+WMTLNGG +   +EK D +++   F +  IK+GGYGI DVAW++D+E WAVGG  +++YS D GK+F F   A D+   NLYNVKFF   G+ G+ALG+ G+LL
Sbjct:   30 VSFKDGEGWVLGKPTLLLHTKDGGKSWERIPLSPKLPGEPTGILALGPNQAEMITSSGAVYTTENAGRNWKAQVKETIDATLNRISSSGVSGASYFTGSIVNEQR-DSDGSYLAVSSRGNFFLTWQPGQEFWIPHNRGTPRRIQNMGFVRGDIKNGVWMTLNGGKLL-VSEKADLSSEEFPFNEAAIKTGGYGITDVAWRNDNEVWAVGGSNTMFYSTDNGKNFSFDKSANDIPG-NLYNVKFFPEFGNAGWALGSGGLLL 287

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BLAST of mRNA_H-elongata_contig9610.17007.1 vs. uniprot
Match: A0A7S3PV43_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PV43_9STRA)

HSP 1 Score: 314 bits (805), Expect = 5.150e-103
Identity = 159/268 (59.33%), Postives = 201/268 (75.00%), Query Frame = 0

Query:    1 TFACVQVSLYDDEIFVVGKPPILLHSKDGGNSWERVSLNPKLPGEPSNIVAMGSGKAEMTTSTGAIYYTKNAGLNFYAQVKETVDATLNRISSSGVSGASYFSGSIIGTTRAEDDGSYLAVSSRGNFYLTWSPGQDFWTPHNRGASRRIQNMGFIRGRAADGLWMTLNGGVMQRTTEKPDANTDA-KFTDVPIKSGGYGIIDVAWKDDSEAWAVGGGGSLWYSIDGGKSFKFSSGATDVVATNLYNVKFFG--GDKGFALGAEGVLLK 265
            T+    VS    E +V+GKP +LLH+KD G SWER+ L+PKLPGEP++++A+G  KAEMTTS+GA+Y T+NAG N+ AQV+ET+DATLNRISSSGVSGASYFSGSII   R + DG+Y+AVSSRGNF+LTW PGQDFW PHNRG  RRIQNMGF+ G    GLWMTLNGG +   ++  D + DA  F +  IK+GGYG+ DV ++ D+E WAVGG  +++ S DGGK F F   A D+   NLYNVKFF   G+ G+ALG+ G+LL+
Sbjct:  136 TYRFQVVSFEGGEGWVLGKPTLLLHTKDAGKSWERIPLSPKLPGEPTSVLALGPSKAEMTTSSGAVYITENAGRNWKAQVQETIDATLNRISSSGVSGASYFSGSIINQHR-DADGAYIAVSSRGNFFLTWEPGQDFWIPHNRGTPRRIQNMGFVNGDIHKGLWMTLNGGKLLINSQDVDLSKDAFDFAEADIKTGGYGLTDVGYRTDNEVWAVGGSNTMYVSFDGGKKFSFDKSANDIPG-NLYNVKFFKDYGNMGWALGSNGLLLR 401

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig9610.17007.1 vs. uniprot

BLAST of mRNA_H-elongata_contig9610.17007.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5KCC9_9PHAE	3.400e-147	80.00	PSII_BNR domain-containing protein n=2 Tax=Ectocar...	[more]
A0A836CNS8_9STRA	3.580e-124	69.85	Photosynthesis system II assembly factor YCF48-dom...	[more]
A0A7S2XVG6_9STRA	1.460e-115	65.04	Hypothetical protein n=1 Tax=Fibrocapsa japonica T...	[more]
A0A7R9U3Z4_9STRA	7.290e-115	67.04	Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi...	[more]
A0A7S3XNC3_HETAK	1.340e-111	63.74	Hypothetical protein n=1 Tax=Heterosigma akashiwo ...	[more]
A0A7S2S971_9STRA	1.870e-107	63.46	Hypothetical protein n=1 Tax=Rhizochromulina marin...	[more]
A0A7S2SCF7_9STRA	5.290e-107	61.19	Hypothetical protein n=1 Tax=Eucampia antarctica T...	[more]
A0A7S2UBA7_9STRA	2.860e-105	60.82	Hypothetical protein n=1 Tax=Attheya septentrional...	[more]
K0SVN6_THAOC	1.740e-104	62.07	PSII_BNR domain-containing protein (Fragment) n=1 ...	[more]
A0A7S3PV43_9STRA	5.150e-103	59.33	Hypothetical protein n=1 Tax=Chaetoceros debilis T...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR028203	Photosynthesis system II assembly factor Ycf48/Hcf136-like domain	PFAM	PF14870	PSII_BNR	coord: 5..265 e-value: 2.6E-91 score: 306.0
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	2.130.10.10		coord: 10..254 e-value: 8.3E-6 score: 26.7
None	No IPR available	PANTHER	PTHR47199:SF2	PHOTOSYSTEM II STABILITY/ASSEMBLY FACTOR HCF136, CHLOROPLASTIC	coord: 6..265
None	No IPR available	PANTHER	PTHR47199	FAMILY NOT NAMED	coord: 6..265
None	No IPR available	SUPERFAMILY	110296	Oligoxyloglucan reducing end-specific cellobiohydrolase	coord: 12..258

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig9610	contig	H-elongata_contig9610:4766..6865 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig9610.17007.1	mRNA_H-elongata_contig9610.17007.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig9610 4766..6865 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig9610.17007.1 ID=prot_H-elongata_contig9610.17007.1|Name=mRNA_H-elongata_contig9610.17007.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=266bp
TFACVQVSLYDDEIFVVGKPPILLHSKDGGNSWERVSLNPKLPGEPSNIV
AMGSGKAEMTTSTGAIYYTKNAGLNFYAQVKETVDATLNRISSSGVSGAS
YFSGSIIGTTRAEDDGSYLAVSSRGNFYLTWSPGQDFWTPHNRGASRRIQ
NMGFIRGRAADGLWMTLNGGVMQRTTEKPDANTDAKFTDVPIKSGGYGII
DVAWKDDSEAWAVGGGGSLWYSIDGGKSFKFSSGATDVVATNLYNVKFFG
GDKGFALGAEGVLLK*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR028203	PSII_CF48-like_dom
IPR015943	WD40/YVTN_repeat-like_dom_sf