prot_H-elongata_contig9598.16993.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig9598.16993.1
Unique Nameprot_H-elongata_contig9598.16993.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length475
Homology
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BLAST of mRNA_H-elongata_contig9598.16993.1 vs. uniprot
Match: D7FJE3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJE3_ECTSI)

HSP 1 Score: 179 bits (454), Expect = 1.130e-45
Identity = 135/340 (39.71%), Postives = 174/340 (51.18%), Query Frame = 0 
Query:  161 ANKKMRKWRHRCVYAAVMHHWTPVEVASWVSGLVAQADSSCKLPLAHSGDENEGIASM------------KAVGKKKQDSQES-KETNIFPVEAFPPVSKDDDKAEFIALGKTFAEDDERSNGKEGGTNYAAVA-VDENTGEKDLIRESCSTKKCAGKCTN-NDLDNALV-ETSASDELDGREDNDSSGSAEGTA------------GDAGWTTLRAFKRMGYTGVAIESLVVSSRMDGSCVIEAMEGALQETGDALTRFVKSSIHVPRSIEVEEKRIELMVGGLLRVRPSSTCSQLKMRTFIEAIVRSAEAPRNLTDGQAIVLLPSLGRVLTAGYLQQA 472
            AN++ R+WR R V AA MHHWTPVEVASW+S L+ +A++S KLPL  SGD   G  SM            + +   ++D+QES    N  P E    V   D         KT           EG ++ AA    D      D +      KKC+G   +  D   A V +    D  D   D+   G                   + GW  + A +R GY+G A+E   V   ++G C++EAME AL  T DALTRF+KSS  + R  EVE+KR+ELMV  LL +RP ST SQLK+R     IVRSAEAPR+ T+ +    LPSL RVLTAGY +QA
Sbjct:   66 ANREAREWRGRRVRAAKMHHWTPVEVASWISHLLRKAETSGKLPLLFSGDAKGGTTSMGGDDTGPGAVENRVINPTEEDAQESGTAANPTPEEGGGVVDSSD-----TTPVKT-----------EGSSSPAAAPPCDPAPSLADEV------KKCSGVLADAQDSSIAGVGQAQGDDNFDKNTDDGGHGDVNNXXXXXXXXXXXXENSNNGWAEVEAGERTGYSGAAVEPFAVKEGINGCCIMEAMEDALGHTEDALTRFIKSSTRLARPAEVEQKRVELMVRELLTIRPYSTASQLKLRALGVVIVRSAEAPRDPTNDEINAQLPSLARVLTAGYRRQA 383
[Close]
BLAST of mRNA_H-elongata_contig9598.16993.1 vs. uniprot
Match: A0A6H5LN38_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LN38_9PHAE)

HSP 1 Score: 139 bits (351), Expect = 8.320e-32
Identity = 72/130 (55.38%), Postives = 90/130 (69.23%), Query Frame = 0 
Query:  343 GWTTLRAFKRMGYTGVAIESLVVSSRMDGSCVIEAMEGALQETGDALTRFVKSSIHVPRSIEVEEKRIELMVGGLLRVRPSSTCSQLKMRTFIEAIVRSAEAPRNLTDGQAIVLLPSLGRVLTAGYLQQA 472
            GW  + A +R GY+G A+E   V   ++G C++EAME AL  T DALTRF+KSS  + R  EVE+KR+ELMV  LL +RP ST SQLK+R     IVRSAEAPR+LT+ +    LP L RVLTAGY +QA
Sbjct:  265 GWAEVEAGERTGYSGAAVEPFAVKEGINGCCIMEAMEDALGHTEDALTRFIKSSTRLARPAEVEQKRVELMVRELLTIRPYSTASQLKLRALGVVIVRSAEAPRDLTNDEINAQLPLLARVLTAGYRRQA 394
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig9598.16993.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FJE3_ECTSI1.130e-4539.71Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5LN38_9PHAE8.320e-3255.38Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig9598contigH-elongata_contig9598:4394..8122 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig9598.16993.1mRNA_H-elongata_contig9598.16993.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig9598 4364..8122 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig9598.16993.1 ID=prot_H-elongata_contig9598.16993.1|Name=mRNA_H-elongata_contig9598.16993.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=475bp
MRPLRDLLRDVPIGPRLVYGDVARNVMRLTLRKKPKERARAIDVAAAAAT
RHLQLQRNRILRRPHTVSDRQLCLLRERCVNVGRLGVDGDGNIDIGQDAK
GGNAEASGDGGYDGALLRWRVQEAVDRAGGRARTFLRKLWFKSLSEDDKR
RIRHRQRQRKANKKMRKWRHRCVYAAVMHHWTPVEVASWVSGLVAQADSS
CKLPLAHSGDENEGIASMKAVGKKKQDSQESKETNIFPVEAFPPVSKDDD
KAEFIALGKTFAEDDERSNGKEGGTNYAAVAVDENTGEKDLIRESCSTKK
CAGKCTNNDLDNALVETSASDELDGREDNDSSGSAEGTAGDAGWTTLRAF
KRMGYTGVAIESLVVSSRMDGSCVIEAMEGALQETGDALTRFVKSSIHVP
RSIEVEEKRIELMVGGLLRVRPSSTCSQLKMRTFIEAIVRSAEAPRNLTD
GQAIVLLPSLGRVLTAGYLQQACN*
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