prot_H-elongata_contig95628.16967.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig95628.16967.1
Unique Nameprot_H-elongata_contig95628.16967.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length46
Homology
BLAST of mRNA_H-elongata_contig95628.16967.1 vs. uniprot
Match: A0A6H5KUA0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUA0_9PHAE)

HSP 1 Score: 75.1 bits (183), Expect = 7.100e-17
Identity = 35/46 (76.09%), Postives = 38/46 (82.61%), Query Frame = 0
Query:    1 IRHLTLQVDNCVSENKNHIVIGYLGSLVSRGFTGTVSVQFMPVRHT 46
            I   T+QVDNCVSENKNHIVIGYLGSLV++G  G V VQFMPV HT
Sbjct:   11 IYRFTIQVDNCVSENKNHIVIGYLGSLVAQGIIGEVEVQFMPVGHT 56          
BLAST of mRNA_H-elongata_contig95628.16967.1 vs. uniprot
Match: A0A6H5KN27_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KN27_9PHAE)

HSP 1 Score: 53.9 bits (128), Expect = 2.890e-7
Identity = 24/46 (52.17%), Postives = 33/46 (71.74%), Query Frame = 0
Query:    1 IRHLTLQVDNCVSENKNHIVIGYLGSLVSRGFTGTVSVQFMPVRHT 46
            I+ L LQ+DNCV ENKN+IV+ ++G LV+ G  G+  V F+ V HT
Sbjct:   38 IKRLHLQLDNCVGENKNNIVLAFIGGLVAAGVIGSAEVCFLIVGHT 83          
BLAST of mRNA_H-elongata_contig95628.16967.1 vs. uniprot
Match: A0A6H5KAY2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAY2_9PHAE)

HSP 1 Score: 53.9 bits (128), Expect = 3.730e-7
Identity = 24/46 (52.17%), Postives = 33/46 (71.74%), Query Frame = 0
Query:    1 IRHLTLQVDNCVSENKNHIVIGYLGSLVSRGFTGTVSVQFMPVRHT 46
            I+ L LQ+DNCV ENKN+IV+ ++G LV+ G  G+  V F+ V HT
Sbjct:   38 IKRLHLQLDNCVGENKNNIVLAFIGGLVAAGVIGSAEVCFLIVGHT 83          
BLAST of mRNA_H-elongata_contig95628.16967.1 vs. uniprot
Match: A0A6H5KA02_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KA02_9PHAE)

HSP 1 Score: 53.9 bits (128), Expect = 3.730e-7
Identity = 24/46 (52.17%), Postives = 33/46 (71.74%), Query Frame = 0
Query:    1 IRHLTLQVDNCVSENKNHIVIGYLGSLVSRGFTGTVSVQFMPVRHT 46
            I+ L LQ+DNCV ENKN+IV+ ++G LV+ G  G+  V F+ V HT
Sbjct:  150 IKRLHLQLDNCVGENKNNIVLAFIGGLVAAGVIGSAEVCFLIVGHT 195          
BLAST of mRNA_H-elongata_contig95628.16967.1 vs. uniprot
Match: A0A6H5KK38_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KK38_9PHAE)

HSP 1 Score: 53.5 bits (127), Expect = 5.100e-7
Identity = 24/46 (52.17%), Postives = 33/46 (71.74%), Query Frame = 0
Query:    1 IRHLTLQVDNCVSENKNHIVIGYLGSLVSRGFTGTVSVQFMPVRHT 46
            I+ L LQ+DNCV ENKN+IV+ ++G LV+ G  G+  V F+ V HT
Sbjct:  265 IKRLHLQLDNCVGENKNNIVMAFIGGLVAAGVIGSAEVCFLIVGHT 310          
BLAST of mRNA_H-elongata_contig95628.16967.1 vs. uniprot
Match: A0A6H5JAR9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAR9_9PHAE)

HSP 1 Score: 48.9 bits (115), Expect = 2.190e-5
Identity = 22/46 (47.83%), Postives = 31/46 (67.39%), Query Frame = 0
Query:    1 IRHLTLQVDNCVSENKNHIVIGYLGSLVSRGFTGTVSVQFMPVRHT 46
            I+   LQ+DNCV ENKN+IV+ ++G LV+ G  G   V F+ + HT
Sbjct:   38 IKRRHLQLDNCVGENKNNIVMAFIGGLVAAGVIGFAEVCFLILGHT 83          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig95628.16967.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A6H5KUA0_9PHAE7.100e-1776.09Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KN27_9PHAE2.890e-752.17Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KAY2_9PHAE3.730e-752.17Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KA02_9PHAE3.730e-752.17Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KK38_9PHAE5.100e-752.17Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JAR9_9PHAE2.190e-547.83Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig95628contigH-elongata_contig95628:2350..2487 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig95628.16967.1mRNA_H-elongata_contig95628.16967.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig95628 2350..2487 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig95628.16967.1 ID=prot_H-elongata_contig95628.16967.1|Name=mRNA_H-elongata_contig95628.16967.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=46bp
IRHLTLQVDNCVSENKNHIVIGYLGSLVSRGFTGTVSVQFMPVRHT
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