prot_H-elongata_contig95574.16961.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig95574.16961.1
Unique Nameprot_H-elongata_contig95574.16961.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length50
Homology
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BLAST of mRNA_H-elongata_contig95574.16961.1 vs. uniprot
Match: D8LLN7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLN7_ECTSI)

HSP 1 Score: 79.3 bits (194), Expect = 4.930e-16
Identity = 40/50 (80.00%), Postives = 45/50 (90.00%), Query Frame = 0 
Query:    1 RLLRARTEASSAVVVDGPYSTLQEYMNLPVSEYSLLDSSIIKRLSETTFR 50
            RLLRA T AS+AVVVDGP+S LQ YM LPVSEYSLLDSSII+R+SET+FR
Sbjct:   82 RLLRANTGASAAVVVDGPFSDLQAYMTLPVSEYSLLDSSIIRRVSETSFR 131
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BLAST of mRNA_H-elongata_contig95574.16961.1 vs. uniprot
Match: A0A6H5KPE1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPE1_9PHAE)

HSP 1 Score: 79.0 bits (193), Expect = 6.740e-16
Identity = 39/50 (78.00%), Postives = 46/50 (92.00%), Query Frame = 0 
Query:    1 RLLRARTEASSAVVVDGPYSTLQEYMNLPVSEYSLLDSSIIKRLSETTFR 50
            RLLRA+T AS+AVVVDGP+S LQ YM LPVSEYSLLDSSII+R+S+T+FR
Sbjct:  227 RLLRAKTGASAAVVVDGPFSDLQAYMTLPVSEYSLLDSSIIRRVSDTSFR 276
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig95574.16961.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LLN7_ECTSI4.930e-1680.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KPE1_9PHAE6.740e-1678.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig95574contigH-elongata_contig95574:225..374 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig95574.16961.1mRNA_H-elongata_contig95574.16961.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig95574 225..374 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig95574.16961.1 ID=prot_H-elongata_contig95574.16961.1|Name=mRNA_H-elongata_contig95574.16961.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=50bp
RLLRARTEASSAVVVDGPYSTLQEYMNLPVSEYSLLDSSIIKRLSETTFR
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