prot_H-elongata_contig95531.16958.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig95531.16958.1
Unique Nameprot_H-elongata_contig95531.16958.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length85
Homology
BLAST of mRNA_H-elongata_contig95531.16958.1 vs. uniprot
Match: D8LFM5_ECTSI (Sodium/hydrogen exchanger n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LFM5_ECTSI)

HSP 1 Score: 157 bits (396), Expect = 2.930e-43
Identity = 81/86 (94.19%), Postives = 83/86 (96.51%), Query Frame = 0
Query:    2 AHEFSALNTLLLVVVLGLCILSAYLIKRNRFYYLPESAAAILVGVVVGGMAKIFYPTKDELDFLSFNS--ELFYFLLLPPIIFEAG 85
            AHEFSALNTLLLVVVLGLCILSAYLI+R+RFYYLPESAAAILVGVVVGGMAKIFYPTKDELDFLSFNS  ELFYFL LPPIIFEAG
Sbjct:   15 AHEFSALNTLLLVVVLGLCILSAYLIRRHRFYYLPESAAAILVGVVVGGMAKIFYPTKDELDFLSFNSAQELFYFLFLPPIIFEAG 100          
BLAST of mRNA_H-elongata_contig95531.16958.1 vs. uniprot
Match: W7TAN1_9STRA (Cation/H+ exchanger, CPA1 family (Fragment) n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TAN1_9STRA)

HSP 1 Score: 138 bits (348), Expect = 1.880e-40
Identity = 67/84 (79.76%), Postives = 76/84 (90.48%), Query Frame = 0
Query:    2 AHEFSALNTLLLVVVLGLCILSAYLIKRNRFYYLPESAAAILVGVVVGGMAKIFYPTKDELDFLSFNSELFYFLLLPPIIFEAG 85
            +HEF ALNTLLLV+VLGLCILSAYL+K  +FYYLPESAAAILVG++VGG+A+ F PTKDELDFLSF  ELF+FL LPPIIFEAG
Sbjct:   45 SHEFGALNTLLLVLVLGLCILSAYLVKAYKFYYLPESAAAILVGLLVGGLARAFSPTKDELDFLSFRPELFFFLFLPPIIFEAG 128          
BLAST of mRNA_H-elongata_contig95531.16958.1 vs. uniprot
Match: A0A835YNF3_9STRA (Sodium/hydrogen exchanger n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNF3_9STRA)

HSP 1 Score: 147 bits (370), Expect = 8.080e-40
Identity = 69/84 (82.14%), Postives = 80/84 (95.24%), Query Frame = 0
Query:    2 AHEFSALNTLLLVVVLGLCILSAYLIKRNRFYYLPESAAAILVGVVVGGMAKIFYPTKDELDFLSFNSELFYFLLLPPIIFEAG 85
            AHEF ALNTLLLVVVLGLCILSAYLI++N+ Y LPES AAILVG++VGGMA+++YP+KDELDFLSFN+E+FYFLLLPPIIFEAG
Sbjct:    9 AHEFGALNTLLLVVVLGLCILSAYLIRQNKIYILPESTAAILVGIIVGGMARLYYPSKDELDFLSFNTEMFYFLLLPPIIFEAG 92          
BLAST of mRNA_H-elongata_contig95531.16958.1 vs. uniprot
Match: A0A7S2GI50_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GI50_9STRA)

HSP 1 Score: 135 bits (339), Expect = 2.790e-38
Identity = 65/84 (77.38%), Postives = 75/84 (89.29%), Query Frame = 0
Query:    2 AHEFSALNTLLLVVVLGLCILSAYLIKRNRFYYLPESAAAILVGVVVGGMAKIFYPTKDELDFLSFNSELFYFLLLPPIIFEAG 85
            AHEF ALNTLLLVVVLG+CIL AYLIK++ FYYLPESAA ILVG++VG +A+ F+ TK+ELDFL+F  ELFYFLLLPPIIFEAG
Sbjct:    1 AHEFGALNTLLLVVVLGVCILCAYLIKKHHFYYLPESAAVILVGLLVGALARAFFSTKEELDFLTFRPELFYFLLLPPIIFEAG 84          
BLAST of mRNA_H-elongata_contig95531.16958.1 vs. uniprot
Match: A0A482RUC7_9ARCH (Sodium/hydrogen exchanger 3 n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RUC7_9ARCH)

HSP 1 Score: 138 bits (348), Expect = 1.790e-37
Identity = 67/84 (79.76%), Postives = 76/84 (90.48%), Query Frame = 0
Query:    2 AHEFSALNTLLLVVVLGLCILSAYLIKRNRFYYLPESAAAILVGVVVGGMAKIFYPTKDELDFLSFNSELFYFLLLPPIIFEAG 85
            AHEF ALNTLLLVV+LGLCILSAYLIK+N  YYLPESA AI+VG+VVGGMAK+ YP+ +EL+FLSF  ELF+FLLLPPIIFEAG
Sbjct:    8 AHEFGALNTLLLVVILGLCILSAYLIKKNSLYYLPESAVAIIVGMVVGGMAKLVYPSVEELNFLSFEPELFFFLLLPPIIFEAG 91          
BLAST of mRNA_H-elongata_contig95531.16958.1 vs. uniprot
Match: A0A835YPM8_9STRA (Sodium/hydrogen exchanger n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPM8_9STRA)

HSP 1 Score: 138 bits (348), Expect = 1.380e-36
Identity = 66/84 (78.57%), Postives = 78/84 (92.86%), Query Frame = 0
Query:    2 AHEFSALNTLLLVVVLGLCILSAYLIKRNRFYYLPESAAAILVGVVVGGMAKIFYPTKDELDFLSFNSELFYFLLLPPIIFEAG 85
            AH+F ALNTLLLVV+LGLCILSAYLIKRN+ Y+LPESAAAILVG++VGG A++ YPTKDELDFLS N+E+F+F+LLP IIFEAG
Sbjct:    5 AHQFGALNTLLLVVLLGLCILSAYLIKRNKLYFLPESAAAILVGMLVGGTARLLYPTKDELDFLSLNTEMFFFVLLPVIIFEAG 88          
BLAST of mRNA_H-elongata_contig95531.16958.1 vs. uniprot
Match: A0A2D4BK83_PYTIN (Sodium/hydrogen exchanger 3, variant 8 n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BK83_PYTIN)

HSP 1 Score: 130 bits (327), Expect = 5.760e-36
Identity = 61/83 (73.49%), Postives = 72/83 (86.75%), Query Frame = 0
Query:    3 HEFSALNTLLLVVVLGLCILSAYLIKRNRFYYLPESAAAILVGVVVGGMAKIFYPTKDELDFLSFNSELFYFLLLPPIIFEAG 85
            HEF ALNTLLLV++LGLCI+ AYLIK  RFYYLPES AAIL+G++VG  A+IFYP++ E++FL FN  LFYFLLLPPIIFEAG
Sbjct:   16 HEFGALNTLLLVIILGLCIVCAYLIKEYRFYYLPESGAAILLGLIVGACARIFYPSRKEMEFLRFNKLLFYFLLLPPIIFEAG 98          
BLAST of mRNA_H-elongata_contig95531.16958.1 vs. uniprot
Match: H3GEB1_PHYRM (Na_H_Exchanger domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GEB1_PHYRM)

HSP 1 Score: 127 bits (319), Expect = 6.120e-35
Identity = 59/83 (71.08%), Postives = 71/83 (85.54%), Query Frame = 0
Query:    3 HEFSALNTLLLVVVLGLCILSAYLIKRNRFYYLPESAAAILVGVVVGGMAKIFYPTKDELDFLSFNSELFYFLLLPPIIFEAG 85
            HEF ALNTLL VV+LG+CI+ AYLIK  RFYYLPES AA+LVG++VG  A++FYP++ E++FL FN  LFYFLLLPPIIFEAG
Sbjct:   16 HEFGALNTLLFVVILGVCIVCAYLIKEYRFYYLPESGAAMLVGMIVGACARLFYPSRKEMEFLRFNKILFYFLLLPPIIFEAG 98          
BLAST of mRNA_H-elongata_contig95531.16958.1 vs. uniprot
Match: A0A6S8SET2_9STRA (Sodium/hydrogen exchanger n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A6S8SET2_9STRA)

HSP 1 Score: 127 bits (319), Expect = 2.070e-33
Identity = 61/83 (73.49%), Postives = 75/83 (90.36%), Query Frame = 0
Query:    3 HEFSALNTLLLVVVLGLCILSAYLIKRNRFYYLPESAAAILVGVVVGGMAKIFYPTKDELDFLSFNSELFYFLLLPPIIFEAG 85
            HEF ALNTLLLVVVLGLC+LSAYLIK+ RFY++PES+AA+ VG+VVGG+A++   + +ELDFLSF+ ELF+FLLLPPIIFEAG
Sbjct:   15 HEFHALNTLLLVVVLGLCLLSAYLIKKYRFYFMPESSAALCVGLVVGGIARLITHSDEELDFLSFSPELFFFLLLPPIIFEAG 97          
BLAST of mRNA_H-elongata_contig95531.16958.1 vs. uniprot
Match: A0A7S3ZNU3_9STRA (Sodium/hydrogen exchanger n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZNU3_9STRA)

HSP 1 Score: 127 bits (319), Expect = 1.000e-32
Identity = 61/83 (73.49%), Postives = 75/83 (90.36%), Query Frame = 0
Query:    3 HEFSALNTLLLVVVLGLCILSAYLIKRNRFYYLPESAAAILVGVVVGGMAKIFYPTKDELDFLSFNSELFYFLLLPPIIFEAG 85
            HEF ALNTLLLVVVLGLC+LSAYLIK+ RFY++PES+AA+ VG+VVGG+A++   + +ELDFLSF+ ELF+FLLLPPIIFEAG
Sbjct:   15 HEFHALNTLLLVVVLGLCLLSAYLIKKYRFYFMPESSAALCVGLVVGGIARLITHSDEELDFLSFSPELFFFLLLPPIIFEAG 97          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig95531.16958.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LFM5_ECTSI2.930e-4394.19Sodium/hydrogen exchanger n=2 Tax=Ectocarpus TaxID... [more]
W7TAN1_9STRA1.880e-4079.76Cation/H+ exchanger, CPA1 family (Fragment) n=1 Ta... [more]
A0A835YNF3_9STRA8.080e-4082.14Sodium/hydrogen exchanger n=1 Tax=Tribonema minus ... [more]
A0A7S2GI50_9STRA2.790e-3877.38Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
A0A482RUC7_9ARCH1.790e-3779.76Sodium/hydrogen exchanger 3 n=1 Tax=archaeon TaxID... [more]
A0A835YPM8_9STRA1.380e-3678.57Sodium/hydrogen exchanger n=1 Tax=Tribonema minus ... [more]
A0A2D4BK83_PYTIN5.760e-3673.49Sodium/hydrogen exchanger 3, variant 8 n=1 Tax=Pyt... [more]
H3GEB1_PHYRM6.120e-3571.08Na_H_Exchanger domain-containing protein n=1 Tax=P... [more]
A0A6S8SET2_9STRA2.070e-3373.49Sodium/hydrogen exchanger n=1 Tax=Pelagomonas calc... [more]
A0A7S3ZNU3_9STRA1.000e-3273.49Sodium/hydrogen exchanger n=2 Tax=Pelagomonas calc... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006153Cation/H+ exchangerPFAMPF00999Na_H_Exchangercoord: 15..85
e-value: 5.0E-7
score: 28.8
NoneNo IPR availablePANTHERPTHR10110:SF127SODIUM/HYDROGEN EXCHANGERcoord: 7..85
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 64..82
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 39..58
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 28..38
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..27
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 83..85
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 59..63
NoneNo IPR availableTMHMMTMhelixcoord: 34..56
NoneNo IPR availableTMHMMTMhelixcoord: 5..27
IPR018422Cation/H+ exchanger, CPA1 familyPANTHERPTHR10110SODIUM/HYDROGEN EXCHANGERcoord: 7..85

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig95531contigH-elongata_contig95531:421..1997 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig95531.16958.1mRNA_H-elongata_contig95531.16958.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig95531 421..2009 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig95531.16958.1 ID=prot_H-elongata_contig95531.16958.1|Name=mRNA_H-elongata_contig95531.16958.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=85bp
MAHEFSALNTLLLVVVLGLCILSAYLIKRNRFYYLPESAAAILVGVVVGG
MAKIFYPTKDELDFLSFNSELFYFLLLPPIIFEAG
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006153Cation/H_exchanger
IPR018422Cation/H_exchanger_CPA1