prot_H-elongata_contig95491.16952.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig95491.16952.1
Unique Nameprot_H-elongata_contig95491.16952.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length135
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig95491.16952.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 49..78
e-value: 0.039
score: 23.1
coord: 82..111
e-value: 0.0042
score: 26.3
coord: 16..45
e-value: 1.8E-4
score: 30.8
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 49..81
score: 10.74
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 115..135
score: 9.351
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 82..114
score: 11.461
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 16..48
score: 12.529
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 1..68
e-value: 2.0E-23
score: 84.9
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 69..135
e-value: 8.2E-19
score: 69.7
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 2..134
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 84..134
e-value: 1.1E-8
score: 35.6
coord: 2..80
e-value: 2.1E-14
score: 53.8
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 1..135
score: 45.201
NoneNo IPR availablePANTHERPTHR24178FAMILY NOT NAMEDcoord: 1..135

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig95491contigH-elongata_contig95491:143..2416 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig95491.16952.1mRNA_H-elongata_contig95491.16952.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig95491 143..2416 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig95491.16952.1 ID=prot_H-elongata_contig95491.16952.1|Name=mRNA_H-elongata_contig95491.16952.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=135bp
RLLLERGAPVDDSDSQDWTPLHVACHAGRTDTVRFLLSAGAAVSARTEKR
LTALHIACESGFTDTARVLLEAGLSVGATDDEAYSPLHLASAGGHTDTVR
LLLQCGGAPNSSTERNHRPLHLAAQYGHSSVVKVI
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR036770Ankyrin_rpt-contain_sf
IPR020683Ankyrin_rpt-contain_dom