prot_H-elongata_contig95412.16949.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig95412.16949.1
Unique Nameprot_H-elongata_contig95412.16949.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length194
Homology
BLAST of mRNA_H-elongata_contig95412.16949.1 vs. uniprot
Match: A0A409X491_9AGAR (Uncharacterized protein (Fragment) n=1 Tax=Panaeolus cyanescens TaxID=181874 RepID=A0A409X491_9AGAR)

HSP 1 Score: 57.0 bits (136), Expect = 3.720e-6
Identity = 31/75 (41.33%), Postives = 46/75 (61.33%), Query Frame = 0
Query:   86 IDTGASGNMSPDSNKMTNFQPCNKFLRVANGVSLPIEGKENLVVDFQSG-LGSLRMKLYDVAYVPKLSYHLLSLS 159
            +D GAS + +P  + +TNF P NK  RVA+G  +   GK NL +    G LG+ ++ L DV YVP  S+ L+S++
Sbjct:  433 LDCGASDHFTPCRDALTNFTPVNKTTRVADGRIVNALGKGNLTITVPCGNLGTTKVTLTDVYYVPSFSFTLVSIA 507          
BLAST of mRNA_H-elongata_contig95412.16949.1 vs. uniprot
Match: A0A5A7UPS0_CUCME (Cysteine-rich RLK (RECEPTOR-like protein kinase) 8 n=1 Tax=Cucumis melo var. makuwa TaxID=1194695 RepID=A0A5A7UPS0_CUCME)

HSP 1 Score: 56.2 bits (134), Expect = 7.380e-6
Identity = 34/90 (37.78%), Postives = 50/90 (55.56%), Query Frame = 0
Query:   73 LALRVGQGMEMWYIDTGASGNMSPDSNKMTNFQPC--NKFLRVANGVSLPIEGKENLVVDFQSGLGSLRMKLYDVAYVPKLSYHLLSLSE 160
            L L    G   W +D GA+ +++  S    ++ PC  N+ +R+ANG   PI GK  +V+ F          L +V +VPKLSYHLLS+S+
Sbjct:  216 LGLISVDGTNPWILDLGATDHLTGFSEYFVSYTPCAGNEKIRIANGSLAPIAGKGQIVL-FDG------FSLQNVLHVPKLSYHLLSISK 298          
BLAST of mRNA_H-elongata_contig95412.16949.1 vs. uniprot
Match: A0A409X3N3_9AGAR (Uncharacterized protein (Fragment) n=1 Tax=Panaeolus cyanescens TaxID=181874 RepID=A0A409X3N3_9AGAR)

HSP 1 Score: 54.3 bits (129), Expect = 3.090e-5
Identity = 29/75 (38.67%), Postives = 46/75 (61.33%), Query Frame = 0
Query:   86 IDTGASGNMSPDSNKMTNFQPCNKFLRVANGVSLPIEGKENLVVDFQSG-LGSLRMKLYDVAYVPKLSYHLLSLS 159
            +D GAS + +P  N +TNF+   +  RVA+G  +   GK +L +D   G LG+ ++ L DV YVP  S+ L+S++
Sbjct:  440 LDCGASDHFTPCRNSLTNFKSIKETTRVADGRIVDALGKGDLTIDVPCGSLGTTKVTLSDVLYVPTFSFTLVSIA 514          
BLAST of mRNA_H-elongata_contig95412.16949.1 vs. uniprot
Match: A0A409YXH8_9AGAR (CCHC-type domain-containing protein n=1 Tax=Panaeolus cyanescens TaxID=181874 RepID=A0A409YXH8_9AGAR)

HSP 1 Score: 53.1 bits (126), Expect = 8.430e-5
Identity = 30/83 (36.14%), Postives = 47/83 (56.63%), Query Frame = 0
Query:   86 IDTGASGNMSPDSNKMTNFQPCNKFLRVANGVSLPIEGKENLVVDFQSG-LGSLRMKLYDVAYVPKLSYHLLSLSEAVEQGYS 167
            +D GAS + +P  + +TNF P  +  RVA+G  +   GK +L +    G LGS ++ L DV YVP  S+ L+S++  +    S
Sbjct:  435 LDCGASDHYTPCRDSLTNFTPVKEATRVADGRIVHALGKGDLTITVPCGKLGSTKVTLSDVYYVPSFSFTLVSIAHILHNSNS 517          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig95412.16949.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A409X491_9AGAR3.720e-641.33Uncharacterized protein (Fragment) n=1 Tax=Panaeol... [more]
A0A5A7UPS0_CUCME7.380e-637.78Cysteine-rich RLK (RECEPTOR-like protein kinase) 8... [more]
A0A409X3N3_9AGAR3.090e-538.67Uncharacterized protein (Fragment) n=1 Tax=Panaeol... [more]
A0A409YXH8_9AGAR8.430e-536.14CCHC-type domain-containing protein n=1 Tax=Panaeo... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001878Zinc finger, CCHC-typePROSITEPS50158ZF_CCHCcoord: 1..16
score: 8.911

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig95412contigH-elongata_contig95412:1664..2245 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig95412.16949.1mRNA_H-elongata_contig95412.16949.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig95412 1664..2245 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig95412.16949.1 ID=prot_H-elongata_contig95412.16949.1|Name=mRNA_H-elongata_contig95412.16949.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=194bp
CKRCGGRGHKESKCPSAEDLQTVLAVELPGSDEASATSSMDATGFVAEEV
ERQAFVASDECNGGAPTGGLTQLALRVGQGMEMWYIDTGASGNMSPDSNK
MTNFQPCNKFLRVANGVSLPIEGKENLVVDFQSGLGSLRMKLYDVAYVPK
LSYHLLSLSEAVEQGYSYKGNGEGLTVKLKSGEKFLVPSMGKMY
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001878Znf_CCHC