prot_H-elongata_contig95407.16948.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig95407.16948.1
Unique Nameprot_H-elongata_contig95407.16948.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length122
Homology
BLAST of mRNA_H-elongata_contig95407.16948.1 vs. uniprot
Match: D7G690_ECTSI (NOT2_3_5 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G690_ECTSI)

HSP 1 Score: 219 bits (558), Expect = 6.170e-67
Identity = 108/122 (88.52%), Postives = 117/122 (95.90%), Query Frame = 0
Query:    1 MGPGVAGGPTAAAVVAATEGKAKKYGLLGLLGVIRMTDPDLNMLALGSDLTTVGLNLDSAEVLYATYASPWAEKPAVPEPQFSLPACYYLQPPPLKPMHLKSFHVETLFYIFYSMPQDAYQA 122
            MGPG+AGGPTAAAVVAA+EGKAKKYGLLGLLGVIRMTDPDLN LALGSDLTTVGLNLDSAEVLYA++ASPWAE+PA PEPQF+LP+CYYLQPPPLKPMHLK+F +ETLFYIFYSMPQD  QA
Sbjct:  332 MGPGIAGGPTAAAVVAASEGKAKKYGLLGLLGVIRMTDPDLNTLALGSDLTTVGLNLDSAEVLYASFASPWAEEPATPEPQFTLPSCYYLQPPPLKPMHLKNFQLETLFYIFYSMPQDVLQA 453          
BLAST of mRNA_H-elongata_contig95407.16948.1 vs. uniprot
Match: A0A836CGQ9_9STRA (NOT2_3_5 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGQ9_9STRA)

HSP 1 Score: 144 bits (364), Expect = 2.070e-41
Identity = 71/96 (73.96%), Postives = 78/96 (81.25%), Query Frame = 0
Query:   27 LLGLLGVIRMTDPDLNMLALGSDLTTVGLNLDSAEVLYATYASPWAEKPAVPEPQFSLPACYYLQPPPLKPMHLKSFHVETLFYIFYSMPQDAYQA 122
            L GLL VIRMTDPDLNMLALGSDLTT+GLNLDS+EVLYAT+A PWAE P+  EPQF LP CYY+QPP LK  H   F +ETLFYIFY+MP D  QA
Sbjct:   25 LTGLLRVIRMTDPDLNMLALGSDLTTLGLNLDSSEVLYATFAGPWAEGPSSGEPQFQLPQCYYMQPPSLKTTHFSKFTLETLFYIFYAMPSDILQA 120          
BLAST of mRNA_H-elongata_contig95407.16948.1 vs. uniprot
Match: A0A7S2IE73_9EUKA (Hypothetical protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2IE73_9EUKA)

HSP 1 Score: 144 bits (363), Expect = 2.470e-41
Identity = 68/103 (66.02%), Postives = 83/103 (80.58%), Query Frame = 0
Query:   20 GKAKKYGLLGLLGVIRMTDPDLNMLALGSDLTTVGLNLDSAEVLYATYASPWAEKPAVPEPQFSLPACYYLQPPPLKPMHLKSFHVETLFYIFYSMPQDAYQA 122
            G   ++GL+GLL VIRMTD DLN LALG+DLTT+GLNL+S+E LYAT+ASPWA+ PA  +P+FSLP CYY+QPP LK  H   F +ETLFYIFY+MP+D  QA
Sbjct:   15 GSGDRFGLMGLLSVIRMTDQDLNTLALGTDLTTLGLNLNSSECLYATFASPWADSPAQRDPEFSLPQCYYMQPPALKTGHFSKFQLETLFYIFYNMPRDTLQA 117          
BLAST of mRNA_H-elongata_contig95407.16948.1 vs. uniprot
Match: A0A7S3JSH1_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JSH1_9STRA)

HSP 1 Score: 151 bits (382), Expect = 9.810e-41
Identity = 71/105 (67.62%), Postives = 88/105 (83.81%), Query Frame = 0
Query:   18 TEGKAKKYGLLGLLGVIRMTDPDLNMLALGSDLTTVGLNLDSAEVLYATYASPWAEKPAVPEPQFSLPACYYLQPPPLKPMHLKSFHVETLFYIFYSMPQDAYQA 122
            T+ +  KYGL+GLL VIRMT+ DLN LALGSDLTT+GLNL+S+E LY+T+ASPW+++P   EPQFSLPACYY+QPPPLK  HL  F +ETLFY+FY+MP+D  QA
Sbjct:  372 TQAQRTKYGLMGLLDVIRMTNADLNTLALGSDLTTLGLNLNSSECLYSTFASPWSQEPTRREPQFSLPACYYMQPPPLKTSHLAKFQLETLFYVFYAMPKDVLQA 476          
BLAST of mRNA_H-elongata_contig95407.16948.1 vs. uniprot
Match: R1DJ08_EMIHU (NOT2_3_5 domain-containing protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1DJ08_EMIHU)

HSP 1 Score: 143 bits (360), Expect = 3.140e-39
Identity = 70/116 (60.34%), Postives = 92/116 (79.31%), Query Frame = 0
Query:    7 GGPTAAAVVAATEGKAKKYGLLGLLGVIRMTDPDLNMLALGSDLTTVGLNLDSAEVLYATYASPWAEKPAVPEPQFSLPACYYLQPPPLKPMHLKSFHVETLFYIFYSMPQDAYQA 122
            GG  A++  +AT+    ++GL+G+L VIRMT+PDLN LALG+DLT++GLNL+SA+ LYAT+ASPWA+ PA  EP+F+LP CYY+QPP LK  H   F +ETLFYIFY+MP+D  QA
Sbjct:  125 GGEPASSAGSATD----RFGLMGILSVIRMTEPDLNTLALGTDLTSLGLNLNSADSLYATFASPWADAPAQREPEFTLPQCYYMQPPALKTGHFSKFQLETLFYIFYNMPRDTLQA 236          
BLAST of mRNA_H-elongata_contig95407.16948.1 vs. uniprot
Match: A0A813H207_POLGL (Hypothetical protein n=2 Tax=Polarella glacialis TaxID=89957 RepID=A0A813H207_POLGL)

HSP 1 Score: 142 bits (357), Expect = 3.310e-39
Identity = 68/100 (68.00%), Postives = 81/100 (81.00%), Query Frame = 0
Query:   23 KKYGLLGLLGVIRMTDPDLNMLALGSDLTTVGLNLDSAEVLYATYASPWAEKPAVPEPQFSLPACYYLQPPPLKPMHLKSFHVETLFYIFYSMPQDAYQA 122
            +KYGLLG+L VIRMTDPDLN LALG DLTT+GLNL+S E LYAT+ASPW++ PA  +P+F LP CYY+ PP LK  HL  F +ETLFYIFY+MP+D  QA
Sbjct:  123 EKYGLLGILKVIRMTDPDLNTLALGMDLTTLGLNLNSPECLYATFASPWSDTPARKDPEFYLPQCYYMNPPQLKTAHLGRFSLETLFYIFYNMPRDTLQA 222          
BLAST of mRNA_H-elongata_contig95407.16948.1 vs. uniprot
Match: A0A7S0L249_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0L249_9EUKA)

HSP 1 Score: 137 bits (346), Expect = 2.190e-38
Identity = 64/106 (60.38%), Postives = 84/106 (79.25%), Query Frame = 0
Query:   17 ATEGKAKKYGLLGLLGVIRMTDPDLNMLALGSDLTTVGLNLDSAEVLYATYASPWAEKPAVPEPQFSLPACYYLQPPPLKPMHLKSFHVETLFYIFYSMPQDAYQA 122
            A+  +A ++GL+G+L VIRMTD DLN LALG+DLTT+GLNL+S++ LYAT+ASPWA+ PA  +P+F+LP CYY+QP  LK  H     +ETLFYIFY+MP+D  QA
Sbjct:   34 ASVARADRFGLMGILSVIRMTDQDLNTLALGTDLTTLGLNLNSSDCLYATFASPWADSPAQRDPEFTLPQCYYMQPAALKTSHFSKLQLETLFYIFYNMPRDTLQA 139          
BLAST of mRNA_H-elongata_contig95407.16948.1 vs. uniprot
Match: A0A8J2SZ99_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SZ99_9STRA)

HSP 1 Score: 145 bits (365), Expect = 2.370e-38
Identity = 73/106 (68.87%), Postives = 83/106 (78.30%), Query Frame = 0
Query:   24 KYGLLGLLGVIRMTDPDLNMLALGSDLTTVGLNLDSAEVLYATYASPWAEKPAVPEPQFSLPACYYLQPPPLKPM-------HLKSFHVETLFYIFYSMPQDAYQA 122
            KYGLLGLL VIRMT+ DLN LALGSDLTT+GLNL+S+E LY+T+ASPWAE P   EPQFSLP CYY+QPPPLK         HL  F +ETLFYIFY+MP+D  QA
Sbjct:  402 KYGLLGLLDVIRMTNADLNTLALGSDLTTLGLNLNSSECLYSTFASPWAEAPITREPQFSLPLCYYMQPPPLKTQYLSQNKSHLSKFQLETLFYIFYAMPKDVLQA 507          
BLAST of mRNA_H-elongata_contig95407.16948.1 vs. uniprot
Match: A0A7S0FMD5_9DINO (Hypothetical protein n=2 Tax=Pyrodinium bahamense TaxID=73915 RepID=A0A7S0FMD5_9DINO)

HSP 1 Score: 141 bits (356), Expect = 6.800e-38
Identity = 67/100 (67.00%), Postives = 81/100 (81.00%), Query Frame = 0
Query:   23 KKYGLLGLLGVIRMTDPDLNMLALGSDLTTVGLNLDSAEVLYATYASPWAEKPAVPEPQFSLPACYYLQPPPLKPMHLKSFHVETLFYIFYSMPQDAYQA 122
            +KYGLLG+L VIRMTDPDLN LALG DLTT+GLNL+S E LY T+ASPW+++PA  +P+FSLP CYY  PP LK  HL+ F  ETLFYIF++MP+D  QA
Sbjct:  263 EKYGLLGILKVIRMTDPDLNTLALGMDLTTLGLNLNSPECLYTTFASPWSDEPAKKDPEFSLPTCYYQNPPQLKTAHLQKFSFETLFYIFFNMPRDMLQA 362          
BLAST of mRNA_H-elongata_contig95407.16948.1 vs. uniprot
Match: A0A7S4BBN1_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4BBN1_CHRCT)

HSP 1 Score: 141 bits (355), Expect = 7.660e-38
Identity = 65/103 (63.11%), Postives = 84/103 (81.55%), Query Frame = 0
Query:   20 GKAKKYGLLGLLGVIRMTDPDLNMLALGSDLTTVGLNLDSAEVLYATYASPWAEKPAVPEPQFSLPACYYLQPPPLKPMHLKSFHVETLFYIFYSMPQDAYQA 122
            G+A ++GL+G+L VIRMTD DLN LALG+DLTT+GLNL+S++ LYAT+ASPWA+ PA  +P+F+LP CYY+QPP LK  H     +ETLFYIFY+MP+D  QA
Sbjct:  239 GRADRFGLMGILSVIRMTDQDLNTLALGTDLTTLGLNLNSSDCLYATFASPWADAPAQCDPEFNLPQCYYMQPPALKTSHFSKLQLETLFYIFYNMPRDTLQA 341          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig95407.16948.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G690_ECTSI6.170e-6788.52NOT2_3_5 domain-containing protein n=2 Tax=Ectocar... [more]
A0A836CGQ9_9STRA2.070e-4173.96NOT2_3_5 domain-containing protein n=1 Tax=Tribone... [more]
A0A7S2IE73_9EUKA2.470e-4166.02Hypothetical protein n=1 Tax=Haptolina brevifila T... [more]
A0A7S3JSH1_9STRA9.810e-4167.62Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
R1DJ08_EMIHU3.140e-3960.34NOT2_3_5 domain-containing protein n=1 Tax=Emilian... [more]
A0A813H207_POLGL3.310e-3968.00Hypothetical protein n=2 Tax=Polarella glacialis T... [more]
A0A7S0L249_9EUKA2.190e-3860.38Hypothetical protein n=1 Tax=Coccolithus braarudii... [more]
A0A8J2SZ99_9STRA2.370e-3868.87Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S0FMD5_9DINO6.800e-3867.00Hypothetical protein n=2 Tax=Pyrodinium bahamense ... [more]
A0A7S4BBN1_CHRCT7.660e-3863.11Hypothetical protein n=1 Tax=Chrysotila carterae T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR038635CCR4-NOT complex subunit 2/3/5, N-terminal domain superfamilyGENE3D2.30.30.1020coord: 16..122
e-value: 1.5E-33
score: 117.7
IPR007282NOT2/NOT3/NOT5, C-terminalPFAMPF04153NOT2_3_5coord: 65..121
e-value: 3.1E-7
score: 30.6
NoneNo IPR availablePANTHERPTHR23326:SF3CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT 2coord: 20..121
IPR040168Not2/Not3/Not5PANTHERPTHR23326CCR4 NOT-RELATEDcoord: 20..121

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig95407contigH-elongata_contig95407:65..1888 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig95407.16948.1mRNA_H-elongata_contig95407.16948.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig95407 53..1888 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig95407.16948.1 ID=prot_H-elongata_contig95407.16948.1|Name=mRNA_H-elongata_contig95407.16948.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=122bp
MGPGVAGGPTAAAVVAATEGKAKKYGLLGLLGVIRMTDPDLNMLALGSDL
TTVGLNLDSAEVLYATYASPWAEKPAVPEPQFSLPACYYLQPPPLKPMHL
KSFHVETLFYIFYSMPQDAYQA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR038635CCR4-NOT_su2/3/5_N_sf
IPR007282NOT2/3/5_C
IPR040168Not2/3/5