prot_H-elongata_contig95341.16940.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig95341.16940.1
Unique Nameprot_H-elongata_contig95341.16940.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length45
Homology
BLAST of mRNA_H-elongata_contig95341.16940.1 vs. uniprot
Match: A0A6H5KMF3_9PHAE (Hist_deacetyl domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KMF3_9PHAE)

HSP 1 Score: 69.3 bits (168), Expect = 1.320e-12
Identity = 30/38 (78.95%), Postives = 36/38 (94.74%), Query Frame = 0
Query:    1 SGVLRADEFASLDWDSNPSRAQLTDVLRVHDYSYVQKL 38
            SGVLRADEF+ L+WDSNPSRA+L DVLRVHD++YV+KL
Sbjct:  592 SGVLRADEFSGLEWDSNPSRAELADVLRVHDFNYVEKL 629          
BLAST of mRNA_H-elongata_contig95341.16940.1 vs. uniprot
Match: A0A8J9S9S2_9CHLO (Probable type-2 histone deacetylase 2 at C-terminar half n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9S9S2_9CHLO)

HSP 1 Score: 52.4 bits (124), Expect = 1.250e-6
Identity = 20/42 (47.62%), Postives = 32/42 (76.19%), Query Frame = 0
Query:    2 GVLRADEFASLDWDSNPSRAQLTDVLRVHDYSYVQKLGEGIA 43
            G+LR+ EFA L W++ P  A+++D+LRVH++SYV++L    A
Sbjct:  326 GILRSTEFADLQWETQPPHARISDILRVHEWSYVRELQNACA 367          
BLAST of mRNA_H-elongata_contig95341.16940.1 vs. uniprot
Match: A0A835YM84_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YM84_9STRA)

HSP 1 Score: 52.0 bits (123), Expect = 1.710e-6
Identity = 22/34 (64.71%), Postives = 27/34 (79.41%), Query Frame = 0
Query:    2 GVLRADEFASLDWDSNPSRAQLTDVLRVHDYSYV 35
            GVL A EFA ++WD++P RA L DVLRVH+Y YV
Sbjct:  409 GVLSAAEFAGVEWDADPPRAALADVLRVHEYGYV 442          
BLAST of mRNA_H-elongata_contig95341.16940.1 vs. uniprot
Match: I0Z5S1_COCSC (Arginase/deacetylase n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0Z5S1_COCSC)

HSP 1 Score: 51.2 bits (121), Expect = 3.190e-6
Identity = 20/37 (54.05%), Postives = 31/37 (83.78%), Query Frame = 0
Query:    2 GVLRADEFASLDWDSNPSRAQLTDVLRVHDYSYVQKL 38
            G+LR+ EFA L+W++ P  A++TD+LRVH++SYV+ L
Sbjct:  325 GILRSAEFADLEWETWPPHARITDILRVHEWSYVRTL 361          
BLAST of mRNA_H-elongata_contig95341.16940.1 vs. uniprot
Match: A0A2D4C493_PYTIN (Histone deacetylase, putative n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C493_PYTIN)

HSP 1 Score: 50.4 bits (119), Expect = 5.980e-6
Identity = 22/42 (52.38%), Postives = 29/42 (69.05%), Query Frame = 0
Query:    2 GVLRADEFASLDWDSNPSRAQLTDVLRVHDYSYVQKLGEGIA 43
            GVLRA EF ++ WD +  RA + D+LRVH+Y YVQ+L    A
Sbjct:  406 GVLRAREFRNIAWDYDIPRADIADILRVHEYHYVQRLRRACA 447          
BLAST of mRNA_H-elongata_contig95341.16940.1 vs. uniprot
Match: A0A7S1B8G6_9STRA (Hypothetical protein n=4 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1B8G6_9STRA)

HSP 1 Score: 49.3 bits (116), Expect = 1.530e-5
Identity = 19/37 (51.35%), Postives = 28/37 (75.68%), Query Frame = 0
Query:    2 GVLRADEFASLDWDSNPSRAQLTDVLRVHDYSYVQKL 38
            G+L + EF S  W++N  RA + DVL+VH+YSYV+K+
Sbjct:  360 GILNSKEFCSCVWETNARRASMADVLKVHEYSYVEKI 396          
BLAST of mRNA_H-elongata_contig95341.16940.1 vs. uniprot
Match: A0A7S2UJ04_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UJ04_9STRA)

HSP 1 Score: 49.3 bits (116), Expect = 1.530e-5
Identity = 19/42 (45.24%), Postives = 28/42 (66.67%), Query Frame = 0
Query:    2 GVLRADEFASLDWDSNPSRAQLTDVLRVHDYSYVQKLGEGIA 43
            G+LR  EF    W++   RA ++DVLRVH+YSYV+++    A
Sbjct:  619 GILRCSEFDGCSWETEARRAAISDVLRVHEYSYVERISHACA 660          
BLAST of mRNA_H-elongata_contig95341.16940.1 vs. uniprot
Match: A0A7S4F186_CHRCT (Hypothetical protein (Fragment) n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4F186_CHRCT)

HSP 1 Score: 46.6 bits (109), Expect = 6.530e-5
Identity = 21/37 (56.76%), Postives = 27/37 (72.97%), Query Frame = 0
Query:    2 GVLRADEFASLDWDSNPSRAQLTDVLRVHDYSYVQKL 38
            G LR   F  L+W ++P  A+LTDVLRVHDY YV++L
Sbjct:   82 GTLRGSPFVQLEWRTSPI-AELTDVLRVHDYEYVRRL 117          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig95341.16940.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
A0A6H5KMF3_9PHAE1.320e-1278.95Hist_deacetyl domain-containing protein n=2 Tax=Ec... [more]
A0A8J9S9S2_9CHLO1.250e-647.62Probable type-2 histone deacetylase 2 at C-termina... [more]
A0A835YM84_9STRA1.710e-664.71Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
I0Z5S1_COCSC3.190e-654.05Arginase/deacetylase n=1 Tax=Coccomyxa subellipsoi... [more]
A0A2D4C493_PYTIN5.980e-652.38Histone deacetylase, putative n=1 Tax=Pythium insi... [more]
A0A7S1B8G6_9STRA1.530e-551.35Hypothetical protein n=4 Tax=Corethron hystrix Tax... [more]
A0A7S2UJ04_9STRA1.530e-545.24Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A7S4F186_CHRCT6.530e-556.76Hypothetical protein (Fragment) n=1 Tax=Chrysotila... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig95341contigH-elongata_contig95341:433..567 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig95341.16940.1mRNA_H-elongata_contig95341.16940.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig95341 433..567 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig95341.16940.1 ID=prot_H-elongata_contig95341.16940.1|Name=mRNA_H-elongata_contig95341.16940.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=45bp
SGVLRADEFASLDWDSNPSRAQLTDVLRVHDYSYVQKLGEGIAL*
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