prot_H-elongata_contig95328.16938.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig95328.16938.1
Unique Nameprot_H-elongata_contig95328.16938.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length102
Homology
[Close]
BLAST of mRNA_H-elongata_contig95328.16938.1 vs. uniprot
Match: A0A6H5LBS4_9PHAE (UBC core domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LBS4_9PHAE)

HSP 1 Score: 199 bits (507), Expect = 1.240e-61
Identity = 87/102 (85.29%), Postives = 95/102 (93.14%), Query Frame = 0 
Query:    1 MPVNIKNPAIKRIHADVRELLKDPSDQYYAAPLEDNLFEWHFTVRGPSDTDFAGGVYHGRILLPHEYPFRPPDIVFVTPNGRFKVGVKICLTISSYHPEHWQ 102
            MPVNIKNPAIKRIHADVREL+KDPSDQY+AAPLE NLFEWHFT+RGP DT+F GGVYHGRI+LP EYPFRPPDI+F TPNGRF  G+KICLTISSYHPE+WQ
Sbjct:    1 MPVNIKNPAIKRIHADVRELMKDPSDQYHAAPLESNLFEWHFTIRGPPDTEFQGGVYHGRIILPPEYPFRPPDIMFNTPNGRFSTGMKICLTISSYHPEYWQ 102
[Close]
BLAST of mRNA_H-elongata_contig95328.16938.1 vs. uniprot
Match: A0A6A4Z4I4_9STRA (UBC core domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4Z4I4_9STRA)

HSP 1 Score: 176 bits (447), Expect = 1.840e-55
Identity = 74/99 (74.75%), Postives = 90/99 (90.91%), Query Frame = 0 
Query:    4 NIKNPAIKRIHADVRELLKDPSDQYYAAPLEDNLFEWHFTVRGPSDTDFAGGVYHGRILLPHEYPFRPPDIVFVTPNGRFKVGVKICLTISSYHPEHWQ 102
            +I N AIKRI ADVRE++ DPSDQY+AAPLEDN+F+WHFT+RGP DT+FAGGVYHGRILLP +YPF+PP+I+ +TPNGRF+V  KICL+IS+YHPEHWQ
Sbjct:    5 SIGNTAIKRIRADVREMMTDPSDQYFAAPLEDNMFDWHFTIRGPRDTEFAGGVYHGRILLPSDYPFKPPNIILLTPNGRFEVKKKICLSISAYHPEHWQ 103
[Close]
BLAST of mRNA_H-elongata_contig95328.16938.1 vs. uniprot
Match: W4GQ34_9STRA (UBC core domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GQ34_9STRA)

HSP 1 Score: 176 bits (447), Expect = 4.790e-53
Identity = 74/99 (74.75%), Postives = 90/99 (90.91%), Query Frame = 0 
Query:    4 NIKNPAIKRIHADVRELLKDPSDQYYAAPLEDNLFEWHFTVRGPSDTDFAGGVYHGRILLPHEYPFRPPDIVFVTPNGRFKVGVKICLTISSYHPEHWQ 102
            +I N AIKRI ADVRE++ DPSDQY+AAPLEDN+F+WHFT+RGP DT+FAGGVYHGRILLP +YPF+PP+I+ +TPNGRF+V  KICL+IS+YHPEHWQ
Sbjct:    5 SIGNTAIKRIRADVREMMTDPSDQYFAAPLEDNMFDWHFTIRGPRDTEFAGGVYHGRILLPSDYPFKPPNIILLTPNGRFEVKKKICLSISAYHPEHWQ 103
[Close]
BLAST of mRNA_H-elongata_contig95328.16938.1 vs. uniprot
Match: I2CR53_NANGC (Ubiquitin-conjugating enzyme E2 J1 n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=I2CR53_NANGC)

HSP 1 Score: 177 bits (450), Expect = 6.930e-53
Identity = 74/99 (74.75%), Postives = 91/99 (91.92%), Query Frame = 0 
Query:    4 NIKNPAIKRIHADVRELLKDPSDQYYAAPLEDNLFEWHFTVRGPSDTDFAGGVYHGRILLPHEYPFRPPDIVFVTPNGRFKVGVKICLTISSYHPEHWQ 102
            N+KNPAI+RIHAD+REL KDPSDQY+AAPLE+NLFEWHFT+RGP  TD+  GVYHGRILLP EYPF+PP+I+ +TP+GRF++G KICL+IS++HPEHWQ
Sbjct:    9 NVKNPAIRRIHADIRELQKDPSDQYHAAPLEENLFEWHFTLRGPPATDYDAGVYHGRILLPAEYPFKPPNIMLLTPSGRFEIGKKICLSISAHHPEHWQ 107
[Close]
BLAST of mRNA_H-elongata_contig95328.16938.1 vs. uniprot
Match: A0A024TQK0_9STRA (UBC core domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TQK0_9STRA)

HSP 1 Score: 176 bits (446), Expect = 8.630e-53
Identity = 75/102 (73.53%), Postives = 90/102 (88.24%), Query Frame = 0 
Query:    1 MPVNIKNPAIKRIHADVRELLKDPSDQYYAAPLEDNLFEWHFTVRGPSDTDFAGGVYHGRILLPHEYPFRPPDIVFVTPNGRFKVGVKICLTISSYHPEHWQ 102
            M  +I N AIKRI ADVRE++ DPSDQY AAPLEDN+F+WHFT+RGP DT+FAGGVYHGRILLP +YPF+PP+I+ +TPNGRF+V  KICL+IS+YHPEHWQ
Sbjct:    1 MSTSIGNTAIKRIRADVREMMTDPSDQYSAAPLEDNMFDWHFTIRGPRDTEFAGGVYHGRILLPSDYPFKPPNIILLTPNGRFEVKKKICLSISAYHPEHWQ 102
[Close]
BLAST of mRNA_H-elongata_contig95328.16938.1 vs. uniprot
Match: A0A1V9ZYQ8_9STRA (Ubiquitin-conjugating enzyme E2 n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZYQ8_9STRA)

HSP 1 Score: 175 bits (443), Expect = 2.030e-52
Identity = 73/102 (71.57%), Postives = 90/102 (88.24%), Query Frame = 0 
Query:    1 MPVNIKNPAIKRIHADVRELLKDPSDQYYAAPLEDNLFEWHFTVRGPSDTDFAGGVYHGRILLPHEYPFRPPDIVFVTPNGRFKVGVKICLTISSYHPEHWQ 102
            M  +I N AIKRI ADVRE++ DPSDQYYAAPLE+N+F+WHFT+RGP DT+F GG++HGRILLP EYPF+PP+I+ +TPNGRF+V  KICL+IS+YHPEHWQ
Sbjct:    1 MAASIGNTAIKRIRADVREMMTDPSDQYYAAPLENNMFDWHFTIRGPRDTEFEGGIFHGRILLPSEYPFKPPNIILLTPNGRFEVKKKICLSISAYHPEHWQ 102
[Close]
BLAST of mRNA_H-elongata_contig95328.16938.1 vs. uniprot
Match: A0A1V9YYG8_9STRA (Ubiquitin-conjugating enzyme E2 n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YYG8_9STRA)

HSP 1 Score: 174 bits (440), Expect = 3.920e-52
Identity = 73/102 (71.57%), Postives = 89/102 (87.25%), Query Frame = 0 
Query:    1 MPVNIKNPAIKRIHADVRELLKDPSDQYYAAPLEDNLFEWHFTVRGPSDTDFAGGVYHGRILLPHEYPFRPPDIVFVTPNGRFKVGVKICLTISSYHPEHWQ 102
            M  +I N AIKRI ADVRE++ DPSDQYYAAPLE N+F+WHFT+RGP DT+F GG++HGRILLP EYPF+PP+I+ +TPNGRF+V  KICL+IS+YHPEHWQ
Sbjct:    1 MASSIGNTAIKRIRADVREMMTDPSDQYYAAPLESNMFDWHFTIRGPRDTEFEGGIFHGRILLPSEYPFKPPNIILLTPNGRFEVKKKICLSISAYHPEHWQ 102
[Close]
BLAST of mRNA_H-elongata_contig95328.16938.1 vs. uniprot
Match: A0A7R9ZD33_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9ZD33_9STRA)

HSP 1 Score: 166 bits (419), Expect = 3.520e-51
Identity = 67/97 (69.07%), Postives = 86/97 (88.66%), Query Frame = 0 
Query:    6 KNPAIKRIHADVRELLKDPSDQYYAAPLEDNLFEWHFTVRGPSDTDFAGGVYHGRILLPHEYPFRPPDIVFVTPNGRFKVGVKICLTISSYHPEHWQ 102
            K+P+++RI AD+REL  DPSD+Y+AAPLED++FEWHFT+RGP DT+F GG+YHGRILLP EYPF+PP IVF+TP+GRF+ G K+CL+ S+YHPE WQ
Sbjct:    3 KSPSLRRIKADIRELSLDPSDRYHAAPLEDDMFEWHFTIRGPDDTEFEGGIYHGRILLPAEYPFKPPHIVFLTPSGRFETGTKVCLSFSAYHPELWQ 99
[Close]
BLAST of mRNA_H-elongata_contig95328.16938.1 vs. uniprot
Match: A0A6G0XT22_9STRA (UBC core domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XT22_9STRA)

HSP 1 Score: 172 bits (435), Expect = 3.520e-51
Identity = 73/102 (71.57%), Postives = 88/102 (86.27%), Query Frame = 0 
Query:    1 MPVNIKNPAIKRIHADVRELLKDPSDQYYAAPLEDNLFEWHFTVRGPSDTDFAGGVYHGRILLPHEYPFRPPDIVFVTPNGRFKVGVKICLTISSYHPEHWQ 102
            M  +I N AIKRI ADVRE++ DPSDQY+A PLEDN+F+WHFT+RGP DT F GGVYHGRILLP +YPF+PP+I+ +TPNGRF+V  KICL+IS+YHPEHWQ
Sbjct:    1 MSGSIGNTAIKRIRADVREMMTDPSDQYFATPLEDNMFDWHFTIRGPRDTPFEGGVYHGRILLPADYPFKPPNIILLTPNGRFEVKKKICLSISAYHPEHWQ 102
[Close]
BLAST of mRNA_H-elongata_contig95328.16938.1 vs. uniprot
Match: A0A6U5J510_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A6U5J510_9STRA)

HSP 1 Score: 172 bits (436), Expect = 3.790e-51
Identity = 71/97 (73.20%), Postives = 86/97 (88.66%), Query Frame = 0 
Query:    6 KNPAIKRIHADVRELLKDPSDQYYAAPLEDNLFEWHFTVRGPSDTDFAGGVYHGRILLPHEYPFRPPDIVFVTPNGRFKVGVKICLTISSYHPEHWQ 102
            K+P++KRI AD+REL  DPSDQY AAPLEDN+FEWHFT+RGP DT+F GG YHGRILLP +YPF+PPDI+F+TPNGRF+V  K+CL+IS+YHPE WQ
Sbjct:    3 KSPSLKRIQADMRELASDPSDQYCAAPLEDNMFEWHFTIRGPPDTEFEGGCYHGRILLPADYPFKPPDIIFLTPNGRFQVNTKVCLSISAYHPEFWQ 99
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig95328.16938.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5LBS4_9PHAE1.240e-6185.29UBC core domain-containing protein n=2 Tax=Ectocar... [more]
A0A6A4Z4I4_9STRA1.840e-5574.75UBC core domain-containing protein n=1 Tax=Aphanom... [more]
W4GQ34_9STRA4.790e-5374.75UBC core domain-containing protein n=1 Tax=Aphanom... [more]
I2CR53_NANGC6.930e-5374.75Ubiquitin-conjugating enzyme E2 J1 n=2 Tax=Nannoch... [more]
A0A024TQK0_9STRA8.630e-5373.53UBC core domain-containing protein n=1 Tax=Aphanom... [more]
A0A1V9ZYQ8_9STRA2.030e-5271.57Ubiquitin-conjugating enzyme E2 n=1 Tax=Thraustoth... [more]
A0A1V9YYG8_9STRA3.920e-5271.57Ubiquitin-conjugating enzyme E2 n=1 Tax=Achlya hyp... [more]
A0A7R9ZD33_9STRA3.520e-5169.07Hypothetical protein (Fragment) n=1 Tax=Pseudictyo... [more]
A0A6G0XT22_9STRA3.520e-5171.57UBC core domain-containing protein n=1 Tax=Aphanom... [more]
A0A6U5J510_9STRA3.790e-5173.20Hypothetical protein n=2 Tax=Corethron hystrix Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSMARTSM00212ubc_7coord: 11..102
e-value: 0.0026
score: 10.7
NoneNo IPR availablePANTHERPTHR24068FAMILY NOT NAMEDcoord: 6..102
NoneNo IPR availablePANTHERPTHR24068:SF168UBIQUITIN-CONJUGATING ENZYME E2 J1coord: 6..102
IPR016135Ubiquitin-conjugating enzyme/RWD-likeGENE3D3.10.110.10coord: 3..102
e-value: 5.0E-44
score: 151.9
IPR016135Ubiquitin-conjugating enzyme/RWD-likeSUPERFAMILY54495UBC-likecoord: 9..102
IPR000608Ubiquitin-conjugating enzyme E2PFAMPF00179UQ_concoord: 12..98
e-value: 1.1E-15
score: 57.5
IPR000608Ubiquitin-conjugating enzyme E2PROSITEPS50127UBIQUITIN_CONJUGAT_2coord: 11..102
score: 21.281

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig95328contigH-elongata_contig95328:1823..2128 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig95328.16938.1mRNA_H-elongata_contig95328.16938.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig95328 1823..2128 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig95328.16938.1 ID=prot_H-elongata_contig95328.16938.1|Name=mRNA_H-elongata_contig95328.16938.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=102bp
MPVNIKNPAIKRIHADVRELLKDPSDQYYAAPLEDNLFEWHFTVRGPSDT
DFAGGVYHGRILLPHEYPFRPPDIVFVTPNGRFKVGVKICLTISSYHPEH
WQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016135UBQ-conjugating_enzyme/RWD
IPR000608UBQ-conjugat_E2