prot_H-elongata_contig95240.16932.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig95240.16932.1
Unique Nameprot_H-elongata_contig95240.16932.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length124
Homology
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BLAST of mRNA_H-elongata_contig95240.16932.1 vs. uniprot
Match: D7FVG8_ECTSI (Similar to fetal globin inducing factor n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVG8_ECTSI)

HSP 1 Score: 122 bits (305), Expect = 2.770e-33
Identity = 95/125 (76.00%), Postives = 108/125 (86.40%), Query Frame = 0 
Query:    1 MRMYVESGGSVSRRDFFNNTALHRAASMGFTNLTRYLLKAGAEVDAVANDGWTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPGELLKVEMAERDRREMMKLLGYTPNRTFRKD--EIGDE 123
            MR+YVE+GGSV +RDFFNNTALHR+ASMGFT +T YLL++GAEVDAVANDGWTP XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX P ELLK+EM+ RDR E +KLLG +P+    K   E+GDE
Sbjct:    8 MRLYVEAGGSVKKRDFFNNTALHRSASMGFTAITGYLLESGAEVDAVANDGWTPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIPAELLKIEMSPRDRNETLKLLGSSPSMAGFKHAGEVGDE 132
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig95240.16932.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FVG8_ECTSI2.770e-3376.00Similar to fetal globin inducing factor n=2 Tax=Ec... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 17..46
e-value: 0.0051
score: 26.0
coord: 50..79
e-value: 2.5E-6
score: 37.0
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 17..49
score: 11.247
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 50..82
score: 12.876
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 15..79
e-value: 2.8E-14
score: 53.4
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 1..87
score: 27.292
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 1..118
e-value: 2.5E-27
score: 97.4
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 2..107
NoneNo IPR availablePANTHERPTHR24141FAMILY NOT NAMEDcoord: 37..87
coord: 1..84

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig95240contigH-elongata_contig95240:354..1374 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig95240.16932.1mRNA_H-elongata_contig95240.16932.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig95240 333..2480 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig95240.16932.1 ID=prot_H-elongata_contig95240.16932.1|Name=mRNA_H-elongata_contig95240.16932.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=124bp
MRMYVESGGSVSRRDFFNNTALHRAASMGFTNLTRYLLKAGAEVDAVAND
GWTPLHLACRWGRIGAIKALVEAGANVERVTNDGRSPGELLKVEMAERDR
REMMKLLGYTPNRTFRKDEIGDE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR020683Ankyrin_rpt-contain_dom
IPR036770Ankyrin_rpt-contain_sf