prot_H-elongata_contig95235.16931.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig95235.16931.1
Unique Nameprot_H-elongata_contig95235.16931.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length178
Homology
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BLAST of mRNA_H-elongata_contig95235.16931.1 vs. uniprot
Match: D7G7X8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7X8_ECTSI)

HSP 1 Score: 113 bits (283), Expect = 1.820e-28
Identity = 63/113 (55.75%), Postives = 79/113 (69.91%), Query Frame = 0 
Query:   66 MYEAAKASLVAQLKGAYEDLKKMGYHGPFCCLQLDSTSIGTDDFCTASVSVTLPGNKTSVNLSLATKVFRGHHTQATIMIWIQELTTAIFESFIPTVAPEDVYVAACVNQGLN 178
            MY+ AK SLVAQLK AYE+LKK+GYH P   L L +  +  D       S+ + G+   V+LSLATKVFRG HTQATI  W+++LTT +F+S +P V P DVYVAA V+QGLN
Sbjct:    1 MYQTAKTSLVAQLKEAYEELKKIGYHLPRPVL-LSTAGLDIDWHRRVLHSLGV-GDSLPVHLSLATKVFRGQHTQATIKTWLEQLTTGVFQSIVPAVVPSDVYVAATVDQGLN 111
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BLAST of mRNA_H-elongata_contig95235.16931.1 vs. uniprot
Match: A0A6H5JJU7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJU7_9PHAE)

HSP 1 Score: 96.7 bits (239), Expect = 2.090e-23
Identity = 44/57 (77.19%), Postives = 50/57 (87.72%), Query Frame = 0 
Query:   41 LVAEFVPEYAVTDTSHATLDKILSEMYEAAKASLVAQLKGAYEDLKKMGYHGPFCCL 97
            ++AEFVPEYA TDTSH  L KIL EMY+ AKA LVAQLKGAYE+L+K+GYHGPFCCL
Sbjct:    1 MLAEFVPEYAATDTSHQVLKKILLEMYQTAKAYLVAQLKGAYEELQKIGYHGPFCCL 57
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig95235.16931.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G7X8_ECTSI1.820e-2855.75Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JJU7_9PHAE2.090e-2377.19Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig95235contigH-elongata_contig95235:47..1196 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig95235.16931.1mRNA_H-elongata_contig95235.16931.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig95235 47..1198 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig95235.16931.1 ID=prot_H-elongata_contig95235.16931.1|Name=mRNA_H-elongata_contig95235.16931.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=178bp
GPKKKKLTPQLKDRLDRLSVIWCVRGGRPWRALKDTGHKLLVAEFVPEYA
VTDTSHATLDKILSEMYEAAKASLVAQLKGAYEDLKKMGYHGPFCCLQLD
STSIGTDDFCTASVSVTLPGNKTSVNLSLATKVFRGHHTQATIMIWIQEL
TTAIFESFIPTVAPEDVYVAACVNQGLN
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