prot_H-elongata_contig95145.16924.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig95145.16924.1
Unique Nameprot_H-elongata_contig95145.16924.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length143
Homology
[Close]
BLAST of mRNA_H-elongata_contig95145.16924.1 vs. uniprot
Match: A0A6H5KCW0_9PHAE (PX domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCW0_9PHAE)

HSP 1 Score: 183 bits (465), Expect = 6.160e-51
Identity = 94/143 (65.73%), Postives = 106/143 (74.13%), Query Frame = 0 
Query:    1 QGRSLYFTPQETSVFGYLFDLADTDDDGLVGANDGGHALLGRAGLSPESLQRLWSEAGGGSPDECLARPQWFVLLALVALAQTGRPCTLRDLLVSCDVMQAARSRCYQQLPQGLQRQQVKNLTPRTHP---FLRPLPDFFLDG 140
            +GRSLYFTP+ET +FGYLFDLADTDDDGLVG NDGGHALLGR+ L   +LQRLW+EAGG SPDECLARPQWFVL+ALVALAQ GRPCTLRDLL +CDV+ +A +     LP                     LRP+PDFFLDG
Sbjct:   21 EGRSLYFTPRETVIFGYLFDLADTDDDGLVGGNDGGHALLGRSRLPQSTLQRLWAEAGGESPDECLARPQWFVLVALVALAQAGRPCTLRDLLNTCDVVSSASA----PLPXXXXXXXXXXXXXXXXXAGRLLRPIPDFFLDG 159
[Close]
BLAST of mRNA_H-elongata_contig95145.16924.1 vs. uniprot
Match: D7FWD5_ECTSI (PX domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWD5_ECTSI)

HSP 1 Score: 178 bits (452), Expect = 1.710e-49
Identity = 83/102 (81.37%), Postives = 92/102 (90.20%), Query Frame = 0 
Query:    1 QGRSLYFTPQETSVFGYLFDLADTDDDGLVGANDGGHALLGRAGLSPESLQRLWSEAGGGSPDECLARPQWFVLLALVALAQTGRPCTLRDLLVSCDVMQAA 102
            QGRSLYFTP+ET +FGYLFDLADTDDDGLVG NDGGHALLGR+ L   +LQRLW+EAGG SPDECLARPQWFVL+ALVALAQ GRPCTLRDLL +CDV+ +A
Sbjct:    6 QGRSLYFTPRETVIFGYLFDLADTDDDGLVGGNDGGHALLGRSRLPQSTLQRLWAEAGGESPDECLARPQWFVLVALVALAQAGRPCTLRDLLNTCDVVSSA 107
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig95145.16924.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KCW0_9PHAE6.160e-5165.73PX domain-containing protein n=1 Tax=Ectocarpus sp... [more]
D7FWD5_ECTSI1.710e-4981.37PX domain-containing protein n=1 Tax=Ectocarpus si... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.238.10coord: 5..100
e-value: 2.0E-9
score: 39.0
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 5..88

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig95145contigH-elongata_contig95145:1274..2505 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig95145.16924.1mRNA_H-elongata_contig95145.16924.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig95145 1274..2505 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig95145.16924.1 ID=prot_H-elongata_contig95145.16924.1|Name=mRNA_H-elongata_contig95145.16924.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=143bp
QGRSLYFTPQETSVFGYLFDLADTDDDGLVGANDGGHALLGRAGLSPESL
QRLWSEAGGGSPDECLARPQWFVLLALVALAQTGRPCTLRDLLVSCDVMQ
AARSRCYQQLPQGLQRQQVKNLTPRTHPFLRPLPDFFLDGGVP
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011992EF-hand-dom_pair