prot_H-elongata_contig95137.16923.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig95137.16923.1
Unique Nameprot_H-elongata_contig95137.16923.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length109
Homology
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BLAST of mRNA_H-elongata_contig95137.16923.1 vs. uniprot
Match: D7G506_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G506_ECTSI)

HSP 1 Score: 57.4 bits (137), Expect = 3.950e-8
Identity = 23/34 (67.65%), Postives = 28/34 (82.35%), Query Frame = 0 
Query:   76 SMPKRFACSRCSRCKIQSKGALYCRVQMLHLLAP 109
            S+P+RF CSRC++CK QSKG  YCRV  LHL+AP
Sbjct:    4 SIPRRFKCSRCAKCKYQSKGTFYCRVNQLHLVAP 37
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig95137.16923.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G506_ECTSI3.950e-867.65Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig95137contigH-elongata_contig95137:343..669 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig95137.16923.1mRNA_H-elongata_contig95137.16923.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig95137 316..669 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig95137.16923.1 ID=prot_H-elongata_contig95137.16923.1|Name=mRNA_H-elongata_contig95137.16923.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=109bp
MFSLKINGYTEEGKAEEKFPARREEPGNSEVVRPSGRERSQPLSPNHGGG
DPEASKLDGPISLDPDGSDKSARSISMPKRFACSRCSRCKIQSKGALYCR
VQMLHLLAP
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