prot_H-elongata_contig95136.16922.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig95136.16922.1
Unique Nameprot_H-elongata_contig95136.16922.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length187
Homology
BLAST of mRNA_H-elongata_contig95136.16922.1 vs. uniprot
Match: A0A6H5KYX0_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYX0_9PHAE)

HSP 1 Score: 141 bits (356), Expect = 1.530e-35
Identity = 102/199 (51.26%), Postives = 120/199 (60.30%), Query Frame = 0
Query:    9 TPSPPLARRTRWKSPTYGQNELLD--GSSSPR---AAPIKRTSEAVSPAKPSHANMPRPQPESSRGRLKSCLSSKKRTRGPQPGLPAADA--SVTGSSGTPD-------QNFLRAFGSPP-------AAMGT---------VKTPGPVRGPGALSGASETSDMIMETPRRVMFGAPMAAEFNHLSPSNRLTPMPSRDAK 177
            TPSPP+ARRTR KSP   +   +   G  SPR   +A  KR+S ++S +  S A+ PRP PES+RGRLKSCLSS+KR RG   G+ ++ +  S + S GTPD          L   GS P       AA G          VKTPG   G     G    SDM++ETPRRVMFGAPMAAEFNHLSPSNRLTPMPSRDAK
Sbjct:  932 TPSPPVARRTRSKSPASMKQVNVGELGLVSPRPALSAKNKRSSMSISASPASKASAPRPAPESARGRLKSCLSSRKRARGGPAGVASSSSGRSPSASLGTPDATNSAGTDGSLAMAGSSPSPSRGGGAAAGGGVAEGAPPGVKTPGSSWGVSCGGGRGPASDMVLETPRRVMFGAPMAAEFNHLSPSNRLTPMPSRDAK 1130          
BLAST of mRNA_H-elongata_contig95136.16922.1 vs. uniprot
Match: D7FTI0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTI0_ECTSI)

HSP 1 Score: 136 bits (343), Expect = 8.100e-34
Identity = 101/201 (50.25%), Postives = 119/201 (59.20%), Query Frame = 0
Query:    9 TPSPPLARRTRWKSPTYGQNELLD--GSSSPRAAPI---KRTSEAVSPAKPSHANMPRPQPESSRGRLKSCLSSKKRTRGPQPGLPAADA-SVTGSSGTPD-------QNFLRAFGSPP-------AAMGT---------VKTPGP---VRGPGALSGASETSDMIMETPRRVMFGAPMAAEFNHLSPSNRLTPMPSRDAK 177
            TPSPP+ARRTR KSP   +   +   G +SPR A     KR+S ++S +  S  + P+P PES+RGRLKSCLSS+KR RG   G+ ++   S + S GTPD          L   GS P       AA G+         VKTPGP   V G          SDM +ETPRRVMFGAPMAAEFNHLSPSNRLTPMPSRDAK
Sbjct:  895 TPSPPVARRTRSKSPASMKRANVGEVGLASPRPAASARNKRSSMSISASPASKVSAPQPAPESARGRLKSCLSSRKRARGGPAGVASSSGRSPSASLGTPDLTNSAGTDGSLAMAGSSPSPSRGGGAAAGSGVIAGAPHGVKTPGPSSGVSGXXXXXXRGPASDMGLETPRRVMFGAPMAAEFNHLSPSNRLTPMPSRDAK 1095          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig95136.16922.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KYX0_9PHAE1.530e-3551.26Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
D7FTI0_ECTSI8.100e-3450.25Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig95136contigH-elongata_contig95136:1505..2397 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig95136.16922.1mRNA_H-elongata_contig95136.16922.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig95136 1496..2397 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig95136.16922.1 ID=prot_H-elongata_contig95136.16922.1|Name=mRNA_H-elongata_contig95136.16922.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=187bp
MTTSSEVKTPSPPLARRTRWKSPTYGQNELLDGSSSPRAAPIKRTSEAVS
PAKPSHANMPRPQPESSRGRLKSCLSSKKRTRGPQPGLPAADASVTGSSG
TPDQNFLRAFGSPPAAMGTVKTPGPVRGPGALSGASETSDMIMETPRRVM
FGAPMAAEFNHLSPSNRLTPMPSRDAKVDWSRNRLG*
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