prot_H-elongata_contig95073.16918.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig95073.16918.1
Unique Nameprot_H-elongata_contig95073.16918.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length168
Homology
BLAST of mRNA_H-elongata_contig95073.16918.1 vs. uniprot
Match: A0A6H5JEI5_9PHAE (tRNA(Ile)-lysidine synthetase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEI5_9PHAE)

HSP 1 Score: 196 bits (498), Expect = 9.200e-58
Identity = 98/157 (62.42%), Postives = 123/157 (78.34%), Query Frame = 0
Query:    4 KILVLVSGGSDSVALLLALNEAAKAFQPHLYLEAAHFNHALRGEESDADQDFVVCLAERLKIRLHLRQWKGADDGGTGGHGAGVQDRARKWRQSEARAILEKMTVEANAGEGSGNDTREAWGDGEGFIATAHHWDDQVETVLMKSLRGAHITNMQVK 160
            ++LVLVSGGSDSVALLLAL  AAK FQP L +EAAHFNH LRG++SDADQD VV +A+ L++ LH+R+W+G ++GGTGG G+G+Q+RAR+WR++EA+ IL K   EA AG G        W    G IATAHH DDQ ETVL+K+LRGAHITN+QV+
Sbjct:  312 QVLVLVSGGSDSVALLLALERAAKTFQPPLRVEAAHFNHGLRGKDSDADQDLVVKMADSLRVPLHVRRWRGPEEGGTGGPGSGMQERARRWRRAEAKDILAKSMAEAGAGRG--------W---RGVIATAHHKDDQAETVLLKALRGAHITNIQVR 457          
BLAST of mRNA_H-elongata_contig95073.16918.1 vs. uniprot
Match: D7FGW8_ECTSI (tRNA(Ile)-lysidine synthetase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGW8_ECTSI)

HSP 1 Score: 197 bits (501), Expect = 1.490e-57
Identity = 100/164 (60.98%), Postives = 123/164 (75.00%), Query Frame = 0
Query:    4 KILVLVSGGSDSVALLLALNEAAKAFQPHLYLEAAHFNHALRGEESDADQDFVVCLAERLKIRLHLRQWKGADDGGTGGHGAGVQDRARKWRQSEARAILEKMTVEANAGEGSGNDTREAWGDGEGFIATAHHWDDQVETVLMKSLRGAHITNMQVKTGKSHRF 167
            ++LVLVSGGSDSVALLLAL  AAK FQP L +EAAHFNH LRG++SDADQD VV +A+ L++ LH+R+WKG ++GGTGG G+G+Q+RAR+WR++EA+ IL K   EA AG G           G G IATAHH DDQ ETVL+K+LRGAHITN+Q     S  F
Sbjct:   34 EVLVLVSGGSDSVALLLALERAAKTFQPPLRVEAAHFNHGLRGKDSDADQDLVVKMADSLRVPLHVRRWKGPEEGGTGGPGSGMQERARRWRRAEAKDILAKSMTEAGAGRG-----------GRGVIATAHHKDDQTETVLLKALRGAHITNIQGMAWHSDPF 186          
BLAST of mRNA_H-elongata_contig95073.16918.1 vs. uniprot
Match: A0A4D9DAX5_9STRA (tRNA(Ile)-lysidine synthetase n=4 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DAX5_9STRA)

HSP 1 Score: 110 bits (275), Expect = 5.060e-25
Identity = 65/165 (39.39%), Postives = 96/165 (58.18%), Query Frame = 0
Query:    5 ILVLVSGGSDSVALLLALNEAAKAFQPHLYLEAAHFNHALRGEESDADQDFVVCLAERLKIRLHLRQWKGADDGGTGGHGAGVQDRARKWRQSEARAILEKMTVEANAGEGSGND-----TREAWGDG------EGFIATAHHWDDQVETVLMKSLRGAHITNMQ 158
            +++ VSGG+DS+ALL  L    K ++P L L  AHFNH LR E +  ++ FV+  A RL + +H   W+  +   +    AGVQ RAR+WR+ E   +L++  +      G G +      RE  GDG      +G IATAHH DD +ET ++K LRGAHI++++
Sbjct:  115 VVIAVSGGADSMALLHLLTRIRKRWEPPLKLTVAHFNHGLRPEAAQ-EEAFVLDAASRLGVPVHTASWQEEERSKS----AGVQARARQWRRQECERLLQEERISGRWQTGKGKEGGAVGEREERGDGSEKEGAQGVIATAHHADDSLETWVLKLLRGAHISHLR 274          
BLAST of mRNA_H-elongata_contig95073.16918.1 vs. uniprot
Match: A0A3D3X974_9DELT (tRNA(Ile)-lysidine synthetase (Fragment) n=2 Tax=root TaxID=1 RepID=A0A3D3X974_9DELT)

HSP 1 Score: 99.0 bits (245), Expect = 3.220e-23
Identity = 59/156 (37.82%), Postives = 89/156 (57.05%), Query Frame = 0
Query:    3 TKILVLVSGGSDSVALLLALNEAAKAFQPHLYLEAAHFNHALRGEESDADQDFVVCLAERLKIRLHLRQWKGADDGGTGGHGAGVQDRARKWRQSEARAILEKMTVEANAGEGSGNDTREAWGDGEGFIATAHHWDDQVETVLMKSLRGAHITNMQ 158
            +++++ VSGG DS+ALL   ++ ++ +  H  L+  HF+H +R  ESD + DFV  LA RL +  HLR+ K    G +       Q++AR WR++EA  + E++                    G  FIATAHH DDQ+ET L+K LRGAH++ +Q
Sbjct:   22 SRLILCVSGGLDSIALLHLFHQLSRRY--HWQLDVLHFHHGIR-IESDEEADFVRELAHRLVLEFHLRETKAFQVGTSS-----FQEKARDWRRTEALKLREEI--------------------GADFIATAHHADDQLETWLLKWLRGAHLSGLQ 149          
BLAST of mRNA_H-elongata_contig95073.16918.1 vs. uniprot
Match: A0A7S3SRF0_EMIHU (tRNA(Ile)-lysidine synthetase n=4 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3SRF0_EMIHU)

HSP 1 Score: 102 bits (255), Expect = 2.200e-22
Identity = 67/173 (38.73%), Postives = 100/173 (57.80%), Query Frame = 0
Query:    4 KILVLVSGGSDSVALLLALNEAAKAFQPH--LYLEAAHFNHALRGEESDADQDFVVCLAERLKIRLHLRQ----WKGADDGGTGGHGAGVQDRARKWRQSEARAILEKMTVEANAGEGSGNDTREAWGDGEG---FIATAHHWDDQVETVLMKSLRGAHITNMQVKTGKSHRF 167
            +++V VSGG DSVALL  L     A QP   L L   HFNH LR E  D ++ FV  LAER  + +H+R+    W+ +  GG       +Q+R+R+WR++E+ A+L+++     AG    +     + D  G    +A AHH DDQ ETVL+K+LRG H++N++    ++ RF
Sbjct:   68 RLVVSVSGGCDSVALLHLL----LALQPRWRLRLHVLHFNHGLRPESGD-EEAFVHALAERHSLPVHVRRLPAGWRESQPGG-------IQERSREWRRAESLALLDELDA---AGPPQFSSADADFADEPGAASLVALAHHADDQAETVLLKALRGCHLSNLRGMEWRAGRF 225          
BLAST of mRNA_H-elongata_contig95073.16918.1 vs. uniprot
Match: A0A7Z9FLV6_9PROT (tRNA(Ile)-lysidine synthase n=3 Tax=Proteobacteria TaxID=1224 RepID=A0A7Z9FLV6_9PROT)

HSP 1 Score: 99.0 bits (245), Expect = 1.140e-21
Identity = 63/155 (40.65%), Postives = 85/155 (54.84%), Query Frame = 0
Query:    4 KILVLVSGGSDSVALLLALNEAAKAFQPHLYLEAAHFNHALRGEESDADQDFVVCLAERLKIRLHLRQWKGADDGGTGGHGAGVQDRARKWRQSEARAILEKMTVEANAGEGSGNDTREAWGDGEGFIATAHHWDDQVETVLMKSLRGAHITNMQ 158
            +++V VSGGSDSVAL   L+  +   Q  L++   HFNH LR E +D +Q+FV  LA++ KI  H    K    G  G     +Q+ AR+WR  E+R +LE +                    G G IAT HH DDQ ET+L+K LRG HI+N+Q
Sbjct:   35 QVVVCVSGGSDSVALFYLLHRLSSLLQLDLHI--LHFNHQLRPEAND-EQNFVKSLADQNKIPFHYVTAKHLKTGQPG-----LQESAREWRIEESRKLLETI--------------------GGGRIATGHHADDQTETLLLKLLRGTHISNLQ 161          
BLAST of mRNA_H-elongata_contig95073.16918.1 vs. uniprot
Match: A0A2D5TXW7_9PROT (tRNA(Ile)-lysidine synthase n=6 Tax=root TaxID=1 RepID=A0A2D5TXW7_9PROT)

HSP 1 Score: 99.0 bits (245), Expect = 1.170e-21
Identity = 59/156 (37.82%), Postives = 89/156 (57.05%), Query Frame = 0
Query:    3 TKILVLVSGGSDSVALLLALNEAAKAFQPHLYLEAAHFNHALRGEESDADQDFVVCLAERLKIRLHLRQWKGADDGGTGGHGAGVQDRARKWRQSEARAILEKMTVEANAGEGSGNDTREAWGDGEGFIATAHHWDDQVETVLMKSLRGAHITNMQ 158
            +++++ VSGG DS+ALL   ++ ++ +  H  L+  HF+H +R  ESD + DFV  LA RL +  HLR+ K    G +       Q++AR WR++EA  + E++                    G  FIATAHH DDQ+ET L+K LRGAH++ +Q
Sbjct:   41 SRLILCVSGGLDSIALLHLFHQLSRRY--HWQLDVLHFHHGIR-IESDEEADFVRELAHRLVLEFHLRETKAFQVGTSS-----FQEKARDWRRTEALKLREEI--------------------GADFIATAHHADDQLETWLLKWLRGAHLSGLQ 168          
BLAST of mRNA_H-elongata_contig95073.16918.1 vs. uniprot
Match: A0A1Q9CRH8_SYMMI (tRNA(Ile)-lysidine synthetase n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A1Q9CRH8_SYMMI)

HSP 1 Score: 100 bits (248), Expect = 2.550e-21
Identity = 63/167 (37.72%), Postives = 90/167 (53.89%), Query Frame = 0
Query:    1 GTTKILVLVSGGSDSVALLLALNEAAKAFQPHLYLEAAHFNHALRGEESDADQDFVVCLAERLKIRLHLRQWKGADDGGTGGHGAGVQDRARKWRQSEARAILEKMTVEANAGEGSGNDTREAWGDGEGFIATAHHWDDQVETVLMKSLRGAHITNMQVKTGKSHRF 167
            G   +++ VSGGSDSVALLL +++ A+ +  +L++   HFNH LR +ES +++ FV  LA     + HLR+   AD  G      G+Q  AR WR+ EA  +LE +   A +G G+              +  AHH DDQVET L+K LRG H+  +        RF
Sbjct:  324 GPRPLVLCVSGGSDSVALLLLVSQVAQTYGWNLHV--LHFNHGLR-QESASEESFVEGLALSADAKFHLRR---ADGAGLKAAAGGLQAAARAWRRQEALQLLESLEGSAASGSGA--------------VLLAHHADDQVETQLLKLLRGGHLARLSGMNLMEGRF 470          
BLAST of mRNA_H-elongata_contig95073.16918.1 vs. uniprot
Match: A0A7S0LJR9_9EUKA (tRNA(Ile)-lysidine synthetase (Fragment) n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LJR9_9EUKA)

HSP 1 Score: 97.1 bits (240), Expect = 3.610e-21
Identity = 62/157 (39.49%), Postives = 93/157 (59.24%), Query Frame = 0
Query:    5 ILVLVSGGSDSVALL--LALNEAAKAFQPHLYLEAAHFNHALRGEESDADQDFVVCLAERLKIRLHLRQW-KGADDGGTGGHGAGVQDRARKWRQSEARAILEKMTVEANAGEGSGNDTREAWGDGEGFIATAHHWDDQVETVLMKSLRGAHITNMQ 158
            ++V VSGG+DSVALL  LA      AF+ H+     HFNHALR E + ++++FV  LA+ L++  H+R+   G D  G GG    VQ+R+R WR++E+R +L ++     +   +           E  +A AHH DDQ ET+L+K LRG H++ +Q
Sbjct:   49 LVVSVSGGADSVALLRLLASLRDEWAFRLHVL----HFNHALRAE-APSEEEFVRSLADELEVPFHVRRLPSGWDRAGKGG----VQERSRSWRRAESRQLLSELQRSDMSSSSA-----------EPAVALAHHADDQAETILLKCLRGCHLSKIQ 185          
BLAST of mRNA_H-elongata_contig95073.16918.1 vs. uniprot
Match: A0A0G4FYP9_VITBC (tRNA(Ile)-lysidine synthetase n=3 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4FYP9_VITBC)

HSP 1 Score: 98.6 bits (244), Expect = 7.620e-21
Identity = 63/155 (40.65%), Postives = 89/155 (57.42%), Query Frame = 0
Query:    5 ILVLVSGGSDSVALLLALNEAAKAFQPHLYLEAAHFNHALRGEESDADQDFVVCLAERLKIRLHLRQWKGADDGGTGGHGAGVQDRARKWRQSEARAIL-EKMTVEANAGEGSGNDTREAWGDGEGFIATAHHWDDQVETVLMKSLRGAHITNMQ 158
            +LV  SGG DSVALL  L+     F P L LEA HF+H +R E ++ D  FV  LA+ L I   +     A+        +GVQ++AR+WR+  +R +L E+++V+ +AG           G   G +   H  DDQVETV+MK LRGAHI+N++
Sbjct:  109 LLVSCSGGVDSVALLHLLHRLRGRFDPPLRLEAIHFDHRIRNESAE-DAAFVCDLAKSLGINATVEVLSDAERSTLT---SGVQEKARRWRRERSREVLMERLSVDPDAG-----------GCRIGSVVLGHQADDQVETVIMKMLRGAHISNLR 248          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig95073.16918.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JEI5_9PHAE9.200e-5862.42tRNA(Ile)-lysidine synthetase n=1 Tax=Ectocarpus s... [more]
D7FGW8_ECTSI1.490e-5760.98tRNA(Ile)-lysidine synthetase n=1 Tax=Ectocarpus s... [more]
A0A4D9DAX5_9STRA5.060e-2539.39tRNA(Ile)-lysidine synthetase n=4 Tax=Monodopsidac... [more]
A0A3D3X974_9DELT3.220e-2337.82tRNA(Ile)-lysidine synthetase (Fragment) n=2 Tax=r... [more]
A0A7S3SRF0_EMIHU2.200e-2238.73tRNA(Ile)-lysidine synthetase n=4 Tax=Emiliania hu... [more]
A0A7Z9FLV6_9PROT1.140e-2140.65tRNA(Ile)-lysidine synthase n=3 Tax=Proteobacteria... [more]
A0A2D5TXW7_9PROT1.170e-2137.82tRNA(Ile)-lysidine synthase n=6 Tax=root TaxID=1 R... [more]
A0A1Q9CRH8_SYMMI2.550e-2137.72tRNA(Ile)-lysidine synthetase n=1 Tax=Symbiodinium... [more]
A0A7S0LJR9_9EUKA3.610e-2139.49tRNA(Ile)-lysidine synthetase (Fragment) n=1 Tax=C... [more]
A0A0G4FYP9_VITBC7.620e-2140.65tRNA(Ile)-lysidine synthetase n=3 Tax=Vitrella bra... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011063tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminalPFAMPF01171ATP_bind_3coord: 4..157
e-value: 2.1E-19
score: 70.0
IPR014729Rossmann-like alpha/beta/alpha sandwich foldGENE3D3.40.50.620coord: 1..166
e-value: 6.9E-30
score: 105.8
NoneNo IPR availablePANTHERPTHR43033FAMILY NOT NAMEDcoord: 4..157
NoneNo IPR availableSUPERFAMILY52402Adenine nucleotide alpha hydrolases-likecoord: 3..159

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig95073contigH-elongata_contig95073:214..717 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig95073.16918.1mRNA_H-elongata_contig95073.16918.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig95073 214..717 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig95073.16918.1 ID=prot_H-elongata_contig95073.16918.1|Name=mRNA_H-elongata_contig95073.16918.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=168bp
GTTKILVLVSGGSDSVALLLALNEAAKAFQPHLYLEAAHFNHALRGEESD
ADQDFVVCLAERLKIRLHLRQWKGADDGGTGGHGAGVQDRARKWRQSEAR
AILEKMTVEANAGEGSGNDTREAWGDGEGFIATAHHWDDQVETVLMKSLR
GAHITNMQVKTGKSHRF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011063TilS/TtcA_N
IPR014729Rossmann-like_a/b/a_fold