prot_H-elongata_contig94432.16866.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig94432.16866.1
Unique Nameprot_H-elongata_contig94432.16866.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length57
Homology
BLAST of mRNA_H-elongata_contig94432.16866.1 vs. uniprot
Match: A0A6H5JCQ1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCQ1_9PHAE)

HSP 1 Score: 67.8 bits (164), Expect = 4.360e-12
Identity = 29/56 (51.79%), Postives = 41/56 (73.21%), Query Frame = 0
Query:    1 MRRRQILFAGFVVRMEDSRLPKCLMFGEIMRGAGRVGGEEKEWRGCLLEDLKAFGI 56
            +R+R++ FAGFV+RMED+RLPK ++ G +  G G  GG+E +W  CL EDL AF +
Sbjct:  146 VRKRRLCFAGFVMRMEDNRLPKRMLLGAMGGGVGSRGGQESDWVSCLGEDLVAFNM 201          
BLAST of mRNA_H-elongata_contig94432.16866.1 vs. uniprot
Match: A0A6H5JHK9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHK9_9PHAE)

HSP 1 Score: 65.1 bits (157), Expect = 2.050e-11
Identity = 29/49 (59.18%), Postives = 36/49 (73.47%), Query Frame = 0
Query:    8 FAGFVVRMEDSRLPKCLMFGEIMRGAGRVGGEEKEWRGCLLEDLKAFGI 56
            FAGFV+RMEDSRLPK ++ GE+ RG G  GG+E +W   L EDL AF +
Sbjct:  114 FAGFVMRMEDSRLPKRMLLGEMARGVGYRGGQESDWVSRLGEDLVAFNM 162          
BLAST of mRNA_H-elongata_contig94432.16866.1 vs. uniprot
Match: A0A6H5JNV8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNV8_9PHAE)

HSP 1 Score: 64.7 bits (156), Expect = 3.510e-11
Identity = 29/56 (51.79%), Postives = 40/56 (71.43%), Query Frame = 0
Query:    1 MRRRQILFAGFVVRMEDSRLPKCLMFGEIMRGAGRVGGEEKEWRGCLLEDLKAFGI 56
            +R+R++ FAGFV+RMEDSRLPK ++ G +  G G  GG+E +W   L EDL AF +
Sbjct:   68 VRKRRLCFAGFVLRMEDSRLPKRMLLGAMAGGVGYRGGQESDWVSRLGEDLVAFNM 123          
BLAST of mRNA_H-elongata_contig94432.16866.1 vs. uniprot
Match: A0A6H5KGF6_9PHAE (Uncharacterized protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGF6_9PHAE)

HSP 1 Score: 64.7 bits (156), Expect = 4.240e-11
Identity = 29/56 (51.79%), Postives = 40/56 (71.43%), Query Frame = 0
Query:    1 MRRRQILFAGFVVRMEDSRLPKCLMFGEIMRGAGRVGGEEKEWRGCLLEDLKAFGI 56
            +R+R++ FAGFV+RMEDSRLPK ++ G +  G G  GG+E +W   L EDL AF +
Sbjct:   84 VRKRRLCFAGFVMRMEDSRLPKHMLLGAMAGGVGYRGGQESDWVSRLGEDLVAFNM 139          
BLAST of mRNA_H-elongata_contig94432.16866.1 vs. uniprot
Match: A0A6H5KDV9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDV9_9PHAE)

HSP 1 Score: 64.7 bits (156), Expect = 6.360e-11
Identity = 29/56 (51.79%), Postives = 40/56 (71.43%), Query Frame = 0
Query:    1 MRRRQILFAGFVVRMEDSRLPKCLMFGEIMRGAGRVGGEEKEWRGCLLEDLKAFGI 56
            +R+R++ FAGFV+RMEDSRLPK ++ G +  G G  GG+E +W   L EDL AF +
Sbjct:  135 VRKRRLCFAGFVMRMEDSRLPKRMLLGAMAGGVGYRGGQESDWVSRLGEDLVAFNM 190          
BLAST of mRNA_H-elongata_contig94432.16866.1 vs. uniprot
Match: A0A6H5JUA0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUA0_9PHAE)

HSP 1 Score: 64.7 bits (156), Expect = 6.850e-11
Identity = 29/56 (51.79%), Postives = 40/56 (71.43%), Query Frame = 0
Query:    1 MRRRQILFAGFVVRMEDSRLPKCLMFGEIMRGAGRVGGEEKEWRGCLLEDLKAFGI 56
            +R+R++ FAGFV+RMEDSRLPK ++ G +  G G  GG+E +W   L EDL AF +
Sbjct:  144 VRKRRLCFAGFVMRMEDSRLPKRMLLGAMAGGVGYRGGQESDWVSRLGEDLVAFNM 199          
BLAST of mRNA_H-elongata_contig94432.16866.1 vs. uniprot
Match: A0A6H5KZJ1_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZJ1_9PHAE)

HSP 1 Score: 65.1 bits (157), Expect = 6.860e-11
Identity = 28/56 (50.00%), Postives = 40/56 (71.43%), Query Frame = 0
Query:    1 MRRRQILFAGFVVRMEDSRLPKCLMFGEIMRGAGRVGGEEKEWRGCLLEDLKAFGI 56
            +R+R++ FAGFV+RMED+RLPKC++   +  G G  GG+E +W   L EDL AF +
Sbjct:  297 VRKRRLCFAGFVMRMEDNRLPKCMLLRAMAGGVGYRGGQESDWVSRLGEDLVAFNM 352          
BLAST of mRNA_H-elongata_contig94432.16866.1 vs. uniprot
Match: A0A6H5KLR9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLR9_9PHAE)

HSP 1 Score: 65.1 bits (157), Expect = 6.910e-11
Identity = 29/56 (51.79%), Postives = 40/56 (71.43%), Query Frame = 0
Query:    1 MRRRQILFAGFVVRMEDSRLPKCLMFGEIMRGAGRVGGEEKEWRGCLLEDLKAFGI 56
            MR+R++ FAGFV+RMED+RLPK ++ G +  G G  GG+E +W   L EDL AF +
Sbjct:  349 MRKRRLCFAGFVMRMEDNRLPKRMLLGAMAGGVGYRGGQESDWVSRLGEDLVAFNM 404          
BLAST of mRNA_H-elongata_contig94432.16866.1 vs. uniprot
Match: A0A6H5KH32_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KH32_9PHAE)

HSP 1 Score: 65.1 bits (157), Expect = 6.940e-11
Identity = 29/56 (51.79%), Postives = 40/56 (71.43%), Query Frame = 0
Query:    1 MRRRQILFAGFVVRMEDSRLPKCLMFGEIMRGAGRVGGEEKEWRGCLLEDLKAFGI 56
            +R+R++ FAGFV+RMEDSRLPK ++ G +  G G  GG+E +W   L EDL AF +
Sbjct:  583 VRKRRLCFAGFVMRMEDSRLPKRMLLGAMTAGVGYRGGQESDWVSRLGEDLVAFNM 638          
BLAST of mRNA_H-elongata_contig94432.16866.1 vs. uniprot
Match: A0A6H5JGX2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGX2_9PHAE)

HSP 1 Score: 65.1 bits (157), Expect = 6.960e-11
Identity = 29/57 (50.88%), Postives = 41/57 (71.93%), Query Frame = 0
Query:    1 MRRRQILFAGFVVRMEDSRLPKCLMFGEIMRGAGRVGGEEKEWRGCLLEDLKAFGIN 57
            +R+R++ FAGFV+RMEDSRLPK ++ G +  G G  GG+E +W   L EDL AF ++
Sbjct:  702 VRKRRLCFAGFVMRMEDSRLPKRMLLGAMAGGVGYRGGQESDWVSRLGEDLVAFNMS 758          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig94432.16866.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JCQ1_9PHAE4.360e-1251.79Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JHK9_9PHAE2.050e-1159.18Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JNV8_9PHAE3.510e-1151.79Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KGF6_9PHAE4.240e-1151.79Uncharacterized protein n=4 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KDV9_9PHAE6.360e-1151.79Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JUA0_9PHAE6.850e-1151.79Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KZJ1_9PHAE6.860e-1150.00Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KLR9_9PHAE6.910e-1151.79Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KH32_9PHAE6.940e-1151.79Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JGX2_9PHAE6.960e-1150.88Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig94432contigH-elongata_contig94432:27..197 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig94432.16866.1mRNA_H-elongata_contig94432.16866.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig94432 27..200 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig94432.16866.1 ID=prot_H-elongata_contig94432.16866.1|Name=mRNA_H-elongata_contig94432.16866.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=57bp
MRRRQILFAGFVVRMEDSRLPKCLMFGEIMRGAGRVGGEEKEWRGCLLED
LKAFGIN
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