prot_H-elongata_contig94333.16859.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig94333.16859.1
Unique Nameprot_H-elongata_contig94333.16859.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length46
Homology
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BLAST of mRNA_H-elongata_contig94333.16859.1 vs. uniprot
Match: A0A6H5LAI5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LAI5_9PHAE)

HSP 1 Score: 47.8 bits (112), Expect = 5.190e-5
Identity = 20/29 (68.97%), Postives = 20/29 (68.97%), Query Frame = 0 
Query:    1 LDACGGHSTTEGWYHYHGTPGCLEEQIMD 29
             DAC  HSTTEG YH HGTPGC  EQ  D
Sbjct:  230 FDACASHSTTEGHYHTHGTPGCFMEQGRD 258
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig94333.16859.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5LAI5_9PHAE5.190e-568.97Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR025924YHYH domainPFAMPF14240YHYHcoord: 1..45
e-value: 1.5E-5
score: 25.1

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig94333contigH-elongata_contig94333:401..538 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig94333.16859.1mRNA_H-elongata_contig94333.16859.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig94333 401..538 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig94333.16859.1 ID=prot_H-elongata_contig94333.16859.1|Name=mRNA_H-elongata_contig94333.16859.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=46bp
LDACGGHSTTEGWYHYHGTPGCLEEQIMDGEGLDYSDHSPILGWSY
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR025924YHYH_dom