prot_H-elongata_contig94331.16858.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig94331.16858.1
Unique Nameprot_H-elongata_contig94331.16858.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length212
Homology
BLAST of mRNA_H-elongata_contig94331.16858.1 vs. uniprot
Match: D7FP44_ECTSI (Sirohydrochlorin ferrochelatase, putative chloroplast n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP44_ECTSI)

HSP 1 Score: 230 bits (587), Expect = 1.590e-73
Identity = 111/127 (87.40%), Postives = 119/127 (93.70%), Query Frame = 0
Query:   80 LGVIVCDHGSRRENANDMLFEVTERYRTFAGFEIVEAAHMELAKPSIEQAFDRCVAAGAQKIVLHPFFLSPGRHVTSDIPELMAAAAKKHPEVAWVVSKPLGLQELMPRVMHAAVSESVEGGAWRLG 206
            +GVIVCDHGSRRENAN MLFEV ERYR+F+GFEIVEAAHMELA+PSIE+AFDRCVAAGAQK+VLHPFFLSPGRHVTSDIP LM AAAK+HP V WVVS+PLGLQELMPRVMHAAVSESV GGAWR G
Sbjct:   87 VGVIVCDHGSRRENANTMLFEVAERYRSFSGFEIVEAAHMELAEPSIEEAFDRCVAAGAQKVVLHPFFLSPGRHVTSDIPALMVAAAKRHPGVGWVVSEPLGLQELMPRVMHAAVSESVAGGAWRHG 213          
BLAST of mRNA_H-elongata_contig94331.16858.1 vs. uniprot
Match: A0A7G9NWY9_9BACT (Uncharacterized protein n=1 Tax=Planctomycetales bacterium zrk34 TaxID=2723666 RepID=A0A7G9NWY9_9BACT)

HSP 1 Score: 139 bits (351), Expect = 1.270e-38
Identity = 64/124 (51.61%), Postives = 87/124 (70.16%), Query Frame = 0
Query:   71 LNEDANTESLGVIVCDHGSRRENANDMLFEVTERYRTFAGFEIVEAAHMELAKPSIEQAFDRCVAAGAQKIVLHPFFLSPGRHVTSDIPELMAAAAKKHPEVAWVVSKPLGLQELMPRVMHAAV 194
            + E  +   +G+IV DHGSRR  +ND+L  V + +   + + I+E AHMELA+P+IEQAFDRCV  GA+ +V HPFFL PG+H   DIP L AAAA KHP + W+V+ P+G+ E MP VM+ A+
Sbjct:    1 MTESLDHNQIGIIVVDHGSRRPESNDLLLAVVKLFAEQSDYPIIEPAHMELAEPTIEQAFDRCVQRGAKVVVCHPFFLLPGKHWNQDIPNLTAAAAGKHPGIRWMVTAPIGMNEKMPLVMNDAI 124          
BLAST of mRNA_H-elongata_contig94331.16858.1 vs. uniprot
Match: A0A518C237_9BACT (Sirohydrochlorin cobaltochelatase n=2 Tax=Bremerella TaxID=2714594 RepID=A0A518C237_9BACT)

HSP 1 Score: 138 bits (347), Expect = 4.950e-38
Identity = 65/117 (55.56%), Postives = 83/117 (70.94%), Query Frame = 0
Query:   78 ESLGVIVCDHGSRRENANDMLFEVTERYRTFAGFEIVEAAHMELAKPSIEQAFDRCVAAGAQKIVLHPFFLSPGRHVTSDIPELMAAAAKKHPEVAWVVSKPLGLQELMPRVMHAAV 194
            E+LG+I+ DHGSRR  +ND+L EV E +R  AG++IVE AHMEL +PSI QAF +CV  GA +IV+HP+FLSPGRH   DIP L   AA  HP +  +V+ PLGL  LM +VM   +
Sbjct:    9 ENLGIIIVDHGSRRAESNDLLLEVVELFRQTAGYKIVEPAHMELVEPSIAQAFQKCVGQGATRIVVHPYFLSPGRHWHEDIPRLAQEAAANHPGITHLVTAPLGLHPLMAKVMQERI 125          
BLAST of mRNA_H-elongata_contig94331.16858.1 vs. uniprot
Match: A0A2S8FXQ9_9BACT (Cobalamin biosynthesis protein CbiX n=1 Tax=Blastopirellula marina TaxID=124 RepID=A0A2S8FXQ9_9BACT)

HSP 1 Score: 136 bits (343), Expect = 1.990e-37
Identity = 64/120 (53.33%), Postives = 85/120 (70.83%), Query Frame = 0
Query:   75 ANTESLGVIVCDHGSRRENANDMLFEVTERYRTFAGFEIVEAAHMELAKPSIEQAFDRCVAAGAQKIVLHPFFLSPGRHVTSDIPELMAAAAKKHPEVAWVVSKPLGLQELMPRVMHAAV 194
            +N E+LG+I+ DHGSRR  +ND+L EV + +R  AG++IVE AHMELA PSI +AF +C   GA +IV+HP+FLSPGRH   DIP L   AA  HP ++ +V+ PLGL  LM +VM   +
Sbjct:    6 SNRENLGIIIVDHGSRRAESNDLLLEVVKMFRQTAGYQIVEPAHMELAAPSIAEAFQKCADQGATQIVVHPYFLSPGRHWHEDIPRLAKEAAASHPGISHLVTAPLGLHPLMAKVMQERI 125          
BLAST of mRNA_H-elongata_contig94331.16858.1 vs. uniprot
Match: A0A5Q4H7Y2_9PLAN (Sirohydrochlorin cobaltochelatase n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A5Q4H7Y2_9PLAN)

HSP 1 Score: 136 bits (343), Expect = 2.050e-37
Identity = 63/122 (51.64%), Postives = 86/122 (70.49%), Query Frame = 0
Query:   78 ESLGVIVCDHGSRRENANDMLFEVTERYRTFAGFEIVEAAHMELAKPSIEQAFDRCVAAGAQKIVLHPFFLSPGRHVTSDIPELMAAAAKKHPEVAWVVSKPLGLQELMPRVMHAAVSESVE 199
            + +GVIV DHGSRR  AN ML +V + ++  +G+ IVE AHMELA+PSI  AFD CVA GA+ +VLHP+FL PG+H + DIP L   AA KHP++ ++V+ PLGL  LM  +M   ++  +E
Sbjct:    7 DRIGVIVVDHGSRRAEANQMLLDVVQMFQQRSGYSIVEPAHMELAEPSIATAFDHCVARGAEMVVLHPYFLLPGKHWSEDIPALARQAASKHPKIPFMVTAPLGLHPLMAEIMQQRIARCLE 128          
BLAST of mRNA_H-elongata_contig94331.16858.1 vs. uniprot
Match: A0A836CEJ2_9STRA (CbiX-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEJ2_9STRA)

HSP 1 Score: 134 bits (338), Expect = 6.180e-37
Identity = 67/121 (55.37%), Postives = 89/121 (73.55%), Query Frame = 0
Query:   97 MLFEVTERYRTFAGFE--------IVEAAHMELAKPSIEQAFDRCVAAGAQKIVLHPFFLSPGRHVTSDIPELMAAAAKKHPEVAWVVSKPLGLQELMPRVMHAAVSESVEGGAWRLGDGI 209
            M+ EV  R+R  A           ++E AHMELA+P+IEQAFD+CVAAGA+ +VLHPFFLSPGRHV+SDIPEL+AAAA +HP V W VS+PLGL  LMP++M+ AV+ +++   W+ G  +
Sbjct:    1 MINEVAARFRQQAEASEAAAAAACVIEVAHMELAEPTIEQAFDKCVAAGAKAVVLHPFFLSPGRHVSSDIPELLAAAASRHPGVKWKVSEPLGLAPLMPQLMNDAVAAALQEPEWQGGQAV 121          
BLAST of mRNA_H-elongata_contig94331.16858.1 vs. uniprot
Match: A3ZMK3_9BACT (CbiX protein n=1 Tax=Blastopirellula marina DSM 3645 TaxID=314230 RepID=A3ZMK3_9BACT)

HSP 1 Score: 134 bits (337), Expect = 1.550e-36
Identity = 65/119 (54.62%), Postives = 85/119 (71.43%), Query Frame = 0
Query:   72 NEDANTESLGVIVCDHGSRRENANDMLFEVTERYRTFAGFEIVEAAHMELAKPSIEQAFDRCVAAGAQKIVLHPFFLSPGRHVTSDIPELMAAAAKKHPEVAWVVSKPLGLQELMPRVM 190
            +E  N E++G++V DHGSRR  +ND+L EV + +R   G  IVEAAHMELA+PSI  AF RCVA GA  +++HP+FLSPGRH + DIP L A AA +HP V  +V+ PLGL + M  +M
Sbjct:    3 SETPNHETIGIVVVDHGSRRAASNDLLLEVVQLFRQTTGRPIVEAAHMELAEPSIAAAFARCVAQGAGLVIVHPYFLSPGRHWSEDIPRLAAQAAAQHPGVRHMVTAPLGLHQKMAEIM 121          
BLAST of mRNA_H-elongata_contig94331.16858.1 vs. uniprot
Match: A0A2E3RDK7_9PLAN (Cobalamin biosynthesis protein CbiX n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A2E3RDK7_9PLAN)

HSP 1 Score: 133 bits (334), Expect = 2.800e-36
Identity = 64/132 (48.48%), Postives = 87/132 (65.91%), Query Frame = 0
Query:   68 ELGLNEDANTESLGVIVCDHGSRRENANDMLFEVTERYRTFAGFEIVEAAHMELAKPSIEQAFDRCVAAGAQKIVLHPFFLSPGRHVTSDIPELMAAAAKKHPEVAWVVSKPLGLQELMPRVMHAAVSESVE 199
            E  + E    E +GVI+ DHGSRRE +N ML E+ + +R    + I+E AHMELA+PSI  A+D CV  GA +I++HPFFL PGRH  SDIP L A AA KHP  +++V+ PLG   LM +++   +S  +E
Sbjct:    2 ETVVTEQRANEIIGVIIVDHGSRREASNQMLLEIVDAFRKSGTYPIIEPAHMELAEPSIADAYDACVQQGATRIIVHPFFLLPGRHWDSDIPRLAAEAAAKHPPTSFLVTNPLGSHPLMIQIISERISACLE 133          
BLAST of mRNA_H-elongata_contig94331.16858.1 vs. uniprot
Match: A0A350CGA9_9PLAN (Uncharacterized protein n=2 Tax=Planctomycetia TaxID=203683 RepID=A0A350CGA9_9PLAN)

HSP 1 Score: 132 bits (331), Expect = 7.690e-36
Identity = 63/119 (52.94%), Postives = 88/119 (73.95%), Query Frame = 0
Query:   81 GVIVCDHGSRRENANDMLFEVTERYRTFAGFEIVEAAHMELAKPSIEQAFDRCVAAGAQKIVLHPFFLSPGRHVTSDIPELMAAAAKKHPEVAWVVSKPLGLQELMPRVMHAAVSESVE 199
            G+++ DHGSRR  +N +L    +R+  ++G++IVE AHMELA+PSI+QAFDRCVA GA++IV+ P+FLSPGRH T DIP L+  AA  HPEV W+V+ P GL + + +    AVSE ++
Sbjct:    9 GLLIVDHGSRRAESNQLLHHAADRFARYSGWQIVEPAHMELAEPSIQQAFDRCVARGARRIVVFPWFLSPGRHWTEDIPGLVEQAAAVHPEVQWLVTPPFGLHQGLLQ----AVSERID 123          
BLAST of mRNA_H-elongata_contig94331.16858.1 vs. uniprot
Match: A0A4D9D8W1_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D8W1_9STRA)

HSP 1 Score: 134 bits (336), Expect = 7.840e-36
Identity = 65/119 (54.62%), Postives = 81/119 (68.07%), Query Frame = 0
Query:   80 LGVIVCDHGSRRENANDMLFEVTERYRTFAGFEIVEAAHMELAKPSIEQAFDRCVAAGAQKIVLHPFFLSPGRHVTSDIPELMAAAAKKHPEVAWVVSKPLGLQELMPRVMHAAVSESV 198
            +GVIV DHGSRR+ AN+ L  V   ++  +G+E+VE AHMEL +PSI  AF RCV  GA  I+ HPFFLS GRHV  DIP L+  AA   P V W +S+PLGLQ  +PR+M  AV E +
Sbjct:   57 VGVIVVDHGSRRKEANEALESVASEFKALSGYELVEPAHMELCEPSIATAFGRCVERGATFIICHPFFLSRGRHVAEDIPNLLEEAASIFPGVEWALSQPLGLQADIPRLMQQAVEECI 175          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig94331.16858.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FP44_ECTSI1.590e-7387.40Sirohydrochlorin ferrochelatase, putative chloropl... [more]
A0A7G9NWY9_9BACT1.270e-3851.61Uncharacterized protein n=1 Tax=Planctomycetales b... [more]
A0A518C237_9BACT4.950e-3855.56Sirohydrochlorin cobaltochelatase n=2 Tax=Bremerel... [more]
A0A2S8FXQ9_9BACT1.990e-3753.33Cobalamin biosynthesis protein CbiX n=1 Tax=Blasto... [more]
A0A5Q4H7Y2_9PLAN2.050e-3751.64Sirohydrochlorin cobaltochelatase n=1 Tax=Planctom... [more]
A0A836CEJ2_9STRA6.180e-3755.37CbiX-domain-containing protein n=1 Tax=Tribonema m... [more]
A3ZMK3_9BACT1.550e-3654.62CbiX protein n=1 Tax=Blastopirellula marina DSM 36... [more]
A0A2E3RDK7_9PLAN2.800e-3648.48Cobalamin biosynthesis protein CbiX n=1 Tax=Planct... [more]
A0A350CGA9_9PLAN7.690e-3652.94Uncharacterized protein n=2 Tax=Planctomycetia Tax... [more]
A0A4D9D8W1_9STRA7.840e-3654.62Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002762Cobalamin (vitamin B12) biosynthesis CbiXPFAMPF01903CbiXcoord: 87..190
e-value: 1.5E-26
score: 92.8
NoneNo IPR availableGENE3D3.40.50.1400coord: 76..200
e-value: 2.4E-29
score: 104.1
NoneNo IPR availablePANTHERPTHR33542FAMILY NOT NAMEDcoord: 21..196
NoneNo IPR availablePANTHERPTHR33542:SF4SIROHYDROCHLORIN FERROCHELATASE, CHLOROPLASTICcoord: 21..196
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..11
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 16..211
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 12..15
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..15
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..16
score: 0.735
NoneNo IPR availableSUPERFAMILY53800Chelatasecoord: 80..196

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig94331contigH-elongata_contig94331:923..2268 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig94331.16858.1mRNA_H-elongata_contig94331.16858.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig94331 923..2268 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig94331.16858.1 ID=prot_H-elongata_contig94331.16858.1|Name=mRNA_H-elongata_contig94331.16858.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=212bp
MRVVCLTAFAFGVAAAFVPNSSTTTRSLTTHLQYRRRALISPSYNANQRR
IRVLFRELSASAAAPGTELGLNEDANTESLGVIVCDHGSRRENANDMLFE
VTERYRTFAGFEIVEAAHMELAKPSIEQAFDRCVAAGAQKIVLHPFFLSP
GRHVTSDIPELMAAAAKKHPEVAWVVSKPLGLQELMPRVMHAAVSESVEG
GAWRLGDGIVR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002762Cbl_biosynth_CbiX