prot_H-elongata_contig94231.16852.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig94231.16852.1
Unique Nameprot_H-elongata_contig94231.16852.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length112
Homology
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BLAST of mRNA_H-elongata_contig94231.16852.1 vs. uniprot
Match: A0A6H5KKX4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKX4_9PHAE)

HSP 1 Score: 130 bits (328), Expect = 5.000e-33
Identity = 66/126 (52.38%), Postives = 80/126 (63.49%), Query Frame = 0 
Query:    1 YDPAVAPFSSDFVVPTDMSLHGLLVVSAHLLADPKLQRVCGSPWESTAGSDTIAA--------------PTTPALEVLRPQVFSFLRVVFGGNGGVQPGSVGFSLAVELWMLWMRPWVAPAILKGN 112
            YDP+VA   S++  PTDMS+HGLL+ SAHLLADPKL+  C    + T G+   +A                TPALEVLRP VF FLRV F  +  +   S GFSLAVELWMLWMRPW A +IL+G+
Sbjct:  422 YDPSVALLHSEYTPPTDMSVHGLLITSAHLLADPKLKEACRRNLDLTGGTPAASALARTGETFSERERSALTPALEVLRPHVFGFLRVAFSADNTMHLSSAGFSLAVELWMLWMRPWAAASILRGH 547
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BLAST of mRNA_H-elongata_contig94231.16852.1 vs. uniprot
Match: A0A836CCE8_9STRA (HSF_DOMAIN domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCE8_9STRA)

HSP 1 Score: 82.4 bits (202), Expect = 5.260e-16
Identity = 52/146 (35.62%), Postives = 74/146 (50.68%), Query Frame = 0 
Query:    1 YDP--AVAPFSSDFVVPTDMSLHGLLVVSAHLLADPKLQRV-------CGSPWESTA--------GSDTIAAPT------------------TPALEVLRPQVFSFLRVVFGGNGGVQPGSVGFSLAVELWMLWMRPWVAPAILKG 111
            +DP  A  P +  F   +D +LH LL++ AHLLADP L+ +        G+  ES A        G++ +  P                   TPAL++L+P V  FLR+ F     +   S  F+L VELW+LW++PW APAIL+G
Sbjct: 1184 FDPIDAKTPDTCPFAPLSDAALHALLLLCAHLLADPALEAIERAIGQAIGAEVESAAAALDGREMGANALRGPRSLGLCAAAAPGAQLLPPMTPALQLLQPYVLDFLRLAFT-RSSMHANSTAFALCVELWLLWLQPWTAPAILRG 1328
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BLAST of mRNA_H-elongata_contig94231.16852.1 vs. uniprot
Match: D7FGU8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGU8_ECTSI)

HSP 1 Score: 81.6 bits (200), Expect = 9.440e-16
Identity = 36/55 (65.45%), Postives = 42/55 (76.36%), Query Frame = 0 
Query:   58 TPALEVLRPQVFSFLRVVFGGNGGVQPGSVGFSLAVELWMLWMRPWVAPAILKGN 112
            TPALEVLRP VF FLRV F  +  +   S GFSLAVELW+LWMRPW A +IL+G+
Sbjct:  332 TPALEVLRPHVFGFLRVAFSADNTMHLSSAGFSLAVELWVLWMRPWAAASILRGH 386
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig94231.16852.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KKX4_9PHAE5.000e-3352.38Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CCE8_9STRA5.260e-1635.62HSF_DOMAIN domain-containing protein n=1 Tax=Tribo... [more]
D7FGU8_ECTSI9.440e-1665.45Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig94231contigH-elongata_contig94231:898..1233 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig94231.16852.1mRNA_H-elongata_contig94231.16852.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig94231 898..1233 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig94231.16852.1 ID=prot_H-elongata_contig94231.16852.1|Name=mRNA_H-elongata_contig94231.16852.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=112bp
YDPAVAPFSSDFVVPTDMSLHGLLVVSAHLLADPKLQRVCGSPWESTAGS
DTIAAPTTPALEVLRPQVFSFLRVVFGGNGGVQPGSVGFSLAVELWMLWM
RPWVAPAILKGN
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