prot_H-elongata_contig93448.16784.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig93448.16784.1
Unique Nameprot_H-elongata_contig93448.16784.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length231
Homology
BLAST of mRNA_H-elongata_contig93448.16784.1 vs. uniprot
Match: A0A401H4R8_9APHY (Uncharacterized protein n=2 Tax=Sparassis crispa TaxID=139825 RepID=A0A401H4R8_9APHY)

HSP 1 Score: 144 bits (363), Expect = 7.770e-36
Identity = 84/256 (32.81%), Postives = 133/256 (51.95%), Query Frame = 0
Query:    1 IKDLGESSYYLGCPITQDRNAWTLTFEEHQYIQTMAERFGVTKTSIIPS-VAGEKALSKSDSPQADAEVKEMRQIPYREIVGALMWAATMTMPGILFAAHQLAKFNDNPGPTHWRAAQKALQYLWRTRDIGME-GSRG---------------------------GGPTISWFSRVQKVTAAASSESEHVALAEMVSELRFLRQVKEFMTPPIDVAIKIHKDNKSAIKMAKTRFSSRRTRHVDIMHHIVRDAIEGE 227
            I DLGE  + LG  + +DR A TL   +  YI ++ +RFG      + + +     LS + SPQ  AE   MR IPYRE VG+LM+A+  T P I +A   L++F+DNPG  HW A ++  +YL  T+D+ +  G++G                            G  +SW S+ Q++ A +++E+E+VA      E  +LR +   +  P   A+ ++ DN+SAI +++      RT+H+DI  H +R  +E E
Sbjct: 1260 ISDLGEIHWILGFAVERDRTARTLALSQTSYINSIIQRFGFEDLKPLTTPMDPNTTLSSAQSPQTTAEAAAMRDIPYREAVGSLMYASLGTRPDITYAVSFLSRFSDNPGRAHWEAVKRVFRYLSGTKDLKLTYGAQGLDLVGYTDADGSMHEDRKAISGYAFLIDGGAVSWSSKRQEIIALSTTEAEYVAATHAAKEALWLRSLIGQVFQPFSEAVTLYSDNQSAITLSRDNQYHARTKHIDIRFHFIRWIVEEE 1515          
BLAST of mRNA_H-elongata_contig93448.16784.1 vs. uniprot
Match: A0A8J6HP80_TENMO (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Tenebrio molitor TaxID=7067 RepID=A0A8J6HP80_TENMO)

HSP 1 Score: 136 bits (343), Expect = 2.750e-35
Identity = 82/256 (32.03%), Postives = 128/256 (50.00%), Query Frame = 0
Query:    1 IKDLGESSYYLGCPITQDRNAWTLTFEEHQYIQTMAERFGVTKTS-IIPSVAGEKALSKSDSPQADAEVKEMRQIPYREIVGALMWAATMTMPGILFAAHQLAKFNDNPGPTHWRAAQKALQYLWRTRDIGMEGSRGG-----------------------------GPTISWFSRVQKVTAAASSESEHVALAEMVSELRFLRQ-VKEFMTPPIDVAIKIHKDNKSAIKMAKTRFSSRRTRHVDIMHHIVRDAIE 225
            +KDLG  S+ LG   TQD    T+T  + +YI+    RF +     +   +   + LSK   P+ + E K +  +PY+ +VG+LM+ A  T P I  A   L++FN N G  HWRAA++ L+YL  T ++G+   + G                                +SW SR Q+  A +S+E+E++AL+E   E   LR+ + E +  P    I    DN+ A +++K      RT+HVDI HH +R+A+E
Sbjct:   23 MKDLGPLSFCLGIEFTQDIKKQTITMSQSKYIKETLSRFNMENCKGVTTPINPNEKLSKEMCPKTEEEKKAVEMLPYQSLVGSLMYLAVSTRPDIAHAVRMLSQFNTNFGEQHWRAAKRVLRYLKNTENLGLMFKKSGQELVGYADADWGANIDDRRSYTGYVFNFANAAVSWESRKQRTVAMSSTEAEYMALSESTKEAIHLRRFLSEVLDQPSTTII--FNDNQGAGQLSKNHVFHNRTKHVDIRHHFIREAVE 276          
BLAST of mRNA_H-elongata_contig93448.16784.1 vs. uniprot
Match: A0A2G8SFR3_9APHY (Transcription factor n=1 Tax=Ganoderma sinense ZZ0214-1 TaxID=1077348 RepID=A0A2G8SFR3_9APHY)

HSP 1 Score: 141 bits (356), Expect = 6.700e-35
Identity = 83/255 (32.55%), Postives = 132/255 (51.76%), Query Frame = 0
Query:    1 IKDLGESSYYLGCPITQDRNAWTLTFEEHQYIQTMAERFGVTKTSIIPS-VAGEKALSKSDSPQADAEVKEMRQIPYREIVGALMWAATMTMPGILFAAHQLAKFNDNPGPTHWRAAQKALQYLWRTRDI------GMEGSRG----------------------GGPTISWFSRVQKVTAAASSESEHVALAEMVSELRFLRQVKEFMTPPIDVAIKIHKDNKSAIKMAKTRFSSRRTRHVDIMHHIVRDAIEG 226
            + DLG  S+ LG  +T+D  A TL+  +H YI ++  RF       I + +     LSK+  P++  +V  M+++PYRE +GALM+AA  T P I FA   LA++++NPG THW A ++  +YL  TR +      G +G  G                       G  +SW S+ Q++   +++ESE+VA      E  +LR+    +  P+     +H DN++AI + K      RT+H+DI +H +R +IE 
Sbjct: 1235 LTDLGPVSWVLGIKVTRDLEARTLSLSQHSYIDSIITRFNFDDLKPISTPMDPHLQLSKTQCPESALDVARMKRVPYREAIGALMYAAMGTRPDIAFAVSTLAQYSENPGWTHWEAVKRVFRYLVGTRHLSLVYGGGKDGLEGFVDADGSSQEHRRAITGYVFLVDGGAVSWASKKQELVTLSTAESEYVAATHAAKEAIWLRRFIGEVFQPLSEPTTLHGDNQAAIALTKDGSYHARTKHIDIRYHFIRYSIEA 1489          
BLAST of mRNA_H-elongata_contig93448.16784.1 vs. uniprot
Match: A0A0V1GS48_9BILA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=2 Tax=Trichinella TaxID=6333 RepID=A0A0V1GS48_9BILA)

HSP 1 Score: 140 bits (352), Expect = 2.270e-34
Identity = 82/255 (32.16%), Postives = 133/255 (52.16%), Query Frame = 0
Query:    1 IKDLGESSYYLGCPITQDRNAWTLTFEEHQYIQTMAERFGVTKTSIIPS-VAGEKALSKSDSPQADAEVKEMRQIPYREIVGALMWAATMTMPGILFAAHQLAKFNDNPGPTHWRAAQKALQYLWRTRDIGMEGSRGGGP-----------------------------TISWFSRVQKVTAAASSESEHVALAEMVSELRFLRQVKEFMTPPIDVAIKIHKDNKSAIKMAKTRFSSRRTRHVDIMHHIVRDAIE 225
            +KD+G   Y LG  I Q  N   +   + +YI  + ERFG+  +  + + +     LS    P+ +AE  EM+ +PYR +VG+LM+ +  T P I FA   L++FN+N G  HW AA++ L+YL +T   G+   R  G                               ISW SR Q+  A +S+E+E++AL+E   E   L+++   +T  +  ++ +H DN+SA+K+A+      RT+H+DI +H +R+A E
Sbjct: 1099 MKDMGPIHYCLGIEIKQSANG-DIEMSQQKYIMDILERFGMRNSKPVGTPIDASNKLSAETCPKTEAEKAEMQNMPYRSLVGSLMYLSVSTRPDIAFAVSLLSQFNENYGKEHWTAAKRVLRYLKKTASYGLRFRRNSGTLMGFSDADWGGNSDDRRSYTGYVFKFGSAAISWESRKQRTVALSSTEAEYMALSEACKEAMHLKRMVVEITG-LSKSVILHSDNQSALKLARNPVFHARTKHIDIRYHFIREAAE 1351          
BLAST of mRNA_H-elongata_contig93448.16784.1 vs. uniprot
Match: A0A0C3AUA9_9AGAM (Uncharacterized protein (Fragment) n=1 Tax=Serendipita vermifera MAFF 305830 TaxID=933852 RepID=A0A0C3AUA9_9AGAM)

HSP 1 Score: 133 bits (335), Expect = 2.990e-34
Identity = 83/260 (31.92%), Postives = 133/260 (51.15%), Query Frame = 0
Query:    1 IKDLGESSYYLGCPITQDRNAWTLTFEEHQYIQTMAERFGVTKTS--IIPSVAGEKALSKSDSPQADAEVKEMRQIPYREIVGALMWAATMTMPGILFAAHQLAKFNDNPGPTHWRAAQKALQYLWRTRD--IGMEG--------------------SRGG------GPTISWFSRVQKVTAAASSESEHVALAEMVSELRFLRQVKEFMTPPIDVAIKIHKDNKSAIKMAKTRFSSRRTRHVDIMHHIVRDAI-EGEVF 229
            I   GE S+ LG  IT+DR+A T++  +  YI ++  RFG+   +    P V G  AL++   P  D EV+EM  +PYRE+VG+LM+    T P I +    L+KF +NPG  HW AA++ L++L  +RD  + + G                    S GG         +SW S+ Q   A +S E+E++AL +   E  +++     +   +   + +  DN+ ++ +AK      RT+H+DI HH +RD +  G +F
Sbjct:   12 ISSAGELSWLLGMRITRDRSAKTISLSQSAYIDSLVTRFGLDNATPAATPFVQG-VALTRDQCPANDDEVREMANVPYRELVGSLMYLRVATRPDISYHVSVLSKFLNNPGRAHWEAAKRVLRFLKGSRDWKLTLGGFSDLVAYSDADWAGDHDDRKSTGGYVFLVGRGAVSWSSKRQPTVALSSLEAEYMALTQAAKEAIWIKSYLADIDVHVHGPVTVFGDNQGSLALAKNPVFHARTKHIDIQHHFIRDCVASGTIF 270          
BLAST of mRNA_H-elongata_contig93448.16784.1 vs. uniprot
Match: A0A401GQU1_9APHY (Uncharacterized protein n=3 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GQU1_9APHY)

HSP 1 Score: 139 bits (351), Expect = 3.110e-34
Identity = 84/257 (32.68%), Postives = 133/257 (51.75%), Query Frame = 0
Query:    1 IKDLGESSYYLGCPITQDRNAWTLTFEEHQYIQTMAERFGVTKTSIIPSVAGEKA-LSKSDSPQADAEVKEMRQIPYREIVGALMWAATMTMPGILFAAHQLAKFNDNPGPTHWRAAQKALQYLWRTRDI---------GMEGSRGG-------------------GPTISWFSRVQKVTAAASSESEHVALAEMVSELRFLRQV-KEFMTPPID-VAIKIHKDNKSAIKMAKTRFSSRRTRHVDIMHHIVRDAIEG 226
            + DLGE  + LG  + +DR A TL+  +  YI  +  RF +     + +     A LS    P    E ++MR +PYRE +G+LM+AA  T P I FA   L++F  NPG  HW AA++ L+YL  TR+          G+EG                       G  +SW ++ Q V A +S+E+E++AL     E  ++R +  + + P +   A+++H DN+SAI +AK      RT+H+DI +H +R+A++ 
Sbjct: 1184 MTDLGEMHWILGIEVRRDRAARTLSLSQRAYIDGLMARFNLEDAKPLSTPLEPGAILSIRQCPSTPREFEDMRNVPYREAIGSLMYAALGTRPDIAFAVTALSQFMQNPGRAHWEAAKRVLRYLKSTREKWLTYGLTRNGVEGFSDADWGSSEHRHSICGYVFLIDGGAVSWSAKKQPVVALSSTEAEYIALTHAAKEAIWVRYLLADILDPDVSKFALRLHTDNRSAIALAKDNAYHARTKHIDIRYHFIREAVDS 1440          
BLAST of mRNA_H-elongata_contig93448.16784.1 vs. uniprot
Match: A0A060SPD4_PYCCI (Integrase catalytic domain-containing protein n=1 Tax=Pycnoporus cinnabarinus TaxID=5643 RepID=A0A060SPD4_PYCCI)

HSP 1 Score: 139 bits (350), Expect = 4.170e-34
Identity = 84/255 (32.94%), Postives = 130/255 (50.98%), Query Frame = 0
Query:    1 IKDLGESSYYLGCPITQDRNAWTLTFEEHQYIQTMAERFGVTKTSIIPS-VAGEKALSKSDSPQADAEVKEMRQIPYREIVGALMWAATMTMPGILFAAHQLAKFNDNPGPTHWRAAQKALQYLWRTRDI------------GMEGSRGG----------------GPTISWFSRVQKVTAAASSESEHVALAEMVSELRFLRQVKEFMTPPIDVAIKIHKDNKSAIKMAKTRFSSRRTRHVDIMHHIVRDAIEG 226
            I DLG  S+ LG  I+ D  A TL+  +H YI+ +  RF  T    +   +   + LSK+  P++ AEV  MR++PYRE +GALM+AA  T P I FA   LA+F  NPG  HW A ++  +YL  TR +            G   + G                 G  +SW S+ Q++   +++ESE+VA      E  +LR++   +  P+  A  ++ DN++AI + K      RT+H+D+ +H +R  I+ 
Sbjct: 1021 ITDLGPVSWLLGIKISCDLEAGTLSLSQHAYIEALLARFNFTDLKPVSMPMDPHQLLSKTQCPESPAEVARMRRVPYREAIGALMYAALGTRPDIAFAVSTLAQFAQNPGQPHWDAVKRIFRYLLGTRTLSLIYGGQQRELEGYVNADGATQEHRRAITGYVFLVDGGAVSWASKKQELVTLSTAESEYVAATHAAKEAIWLRRLIGEVFGPLSNATMLYSDNQAAIALTKDGSYHARTKHIDVRYHFIRYYIDA 1275          
BLAST of mRNA_H-elongata_contig93448.16784.1 vs. uniprot
Match: A0A1M2VT27_TRAPU (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Trametes pubescens TaxID=154538 RepID=A0A1M2VT27_TRAPU)

HSP 1 Score: 134 bits (336), Expect = 2.900e-33
Identity = 82/256 (32.03%), Postives = 133/256 (51.95%), Query Frame = 0
Query:    1 IKDLGESSYYLGCPITQDRNAWTLTFEEHQYIQTMAERFGVTKTSIIPS-VAGEKALSKSDSPQADAEVKEMRQIPYREIVGALMWAATMTMPGILFAAHQLAKFNDNPGPTHWRAAQKALQYLWRTRD------------IGMEGSRGG----------------GPTISWFSRVQKVTAAASSESEHVALAEMVSELRFLRQVKEFMTPPIDVAIKIHKDNKSAIKMAKTRFSSRRTRHVDIMHHIVRDAIEGE 227
            I D GE  + LG  + +DR    L+  +  YI+++  RFG+     I + +    AL+ + SP   AE+  MR +PYRE VG+LM+A+  T P I +A   L++F+DNPG THW A ++ L+YL  T+             +G   + G                 G  +SW S+ Q++ + +++ESE+VA+     E  +LR +   +  P    I ++ DN+SAI +A+      RT+H+DI +H +R  IE +
Sbjct:  152 ISDEGEIHWILGFAVERDRANRRLSLSQTAYIKSIVRRFGLEDAKPISTPMDPHVALTVAQSPSTPAEIGAMRDVPYREAVGSLMYASLGTRPDITYAVSILSRFSDNPGRTHWDAVRRVLRYLHGTKHLKLTYGATELDLVGYSDADGSMHEDRKAISGYAFLIXGGAVSWSSKRQELISLSTTESEYVAVTHAAKEALWLRSLIGQVFAPFVDPITLNSDNQSAIALARDNQYHARTKHIDIRYHFIRWVIEDK 407          
BLAST of mRNA_H-elongata_contig93448.16784.1 vs. uniprot
Match: A0A6H5KP70_9PHAE (Uncharacterized protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP70_9PHAE)

HSP 1 Score: 131 bits (329), Expect = 3.470e-33
Identity = 78/258 (30.23%), Postives = 131/258 (50.78%), Query Frame = 0
Query:    1 IKDLGESSYYLGCPITQDRNAWTLTFEEHQYIQTMAERFGVTKTSIIPSVAGEKALSKSDSPQADAEVKEMRQIPYREIVGALMWAATMTMPGILFAAHQLAKFNDNPGPTHWRAAQKALQYLWRTRDIGMEGSRG--------------------------------GGPTISWFSRVQKVTAAASSESEHVALAEMVSELRFLRQVKEFMTPPIDV-AIKIHKDNKSAIKMAKTRFSSRRTRHVDIMHHIVRDAIE 225
            +K+LGE  +Y  C   +D     L   + ++ + +A  +G+     +P     K L+  D  +A A+V      P+RE+VG+LMW AT T P I  A   +A++  +P   HW+AA   L Y+ RT  +G+   RG                                GG  ++WFSR QK    +++E+E+VA+A+++ E+ FLRQV  FM P   +  I + +DN+ AI++A    ++  ++H+D+ HH +R+ +E
Sbjct:   32 VKNLGELRWYSACFYERDVERGLLRISQQRFAEELAAEYGIEWGRSVPLPVSVK-LTDFDENEACADV------PFRELVGSLMWLATQTRPDIANAVRAVARYCASPKMVHWKAALGILGYVRRTSWMGITFERGVVTGMSMQVFVDADYASKATDRRSVSGGLVMCGGGCVTWFSRTQKCVTLSTTEAEYVAIADVLKEVLFLRQVWRFMLPDAGMPCIPVFEDNQGAIQIAHNPITNSNSKHIDVRHHFIRELVE 282          
BLAST of mRNA_H-elongata_contig93448.16784.1 vs. uniprot
Match: A0A401GN13_9APHY (Uncharacterized protein n=1 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GN13_9APHY)

HSP 1 Score: 135 bits (341), Expect = 6.750e-33
Identity = 85/258 (32.95%), Postives = 132/258 (51.16%), Query Frame = 0
Query:    1 IKDLGESSYYLGCPITQDRNAWTLTFEEHQYIQTMAERFGV--TKTSIIPSVAGEKALSKSDSPQADAEVKEMRQIPYREIVGALMWAATMTMPGILFAAHQLAKFNDNPGPTHWRAAQKALQYLWRTRDI---------GMEG-------------SRGG------GPTISWFSRVQKVTAAASSESEHVALAEMVSELRFLRQVKEFMTPP--IDVAIKIHKDNKSAIKMAKTRFSSRRTRHVDIMHHIVRDAIEG 226
            + DLGE  + LG  + +DR+A TL+  +  YI  +  RF +   K+   P   G   LS    P    + ++M+ IPYRE +G+LM+AA  T P I +A   L++F  NPG  HW AA++  +YL  TR+          G+EG             S  G      G  +SW ++ Q V A +S+E+E++A+     E  +LR +   +  P  +   +++H DNKSAI +AK      RT+H+DI  H +R+ +E 
Sbjct: 1146 MSDLGEMHWILGIEVRRDRDARTLSLSQRAYIDMILTRFNLQDAKSLTTPLDPG-TVLSIHQCPSTPRQFEDMKNIPYREAIGSLMYAALGTRPDIAYAVTALSQFMQNPGRPHWEAAKRVFRYLAGTRERWLTFGETTDGVEGFSDADWGSAEHRHSISGYVFLLDGGAVSWSAKKQNVVALSSTEAEYIAITHATKEALWLRSLLADVLHPDILRYPVRLHSDNKSAIALAKDDAYHARTKHIDIRFHFIRETVEN 1402          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig93448.16784.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A401H4R8_9APHY7.770e-3632.81Uncharacterized protein n=2 Tax=Sparassis crispa T... [more]
A0A8J6HP80_TENMO2.750e-3532.03Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A2G8SFR3_9APHY6.700e-3532.55Transcription factor n=1 Tax=Ganoderma sinense ZZ0... [more]
A0A0V1GS48_9BILA2.270e-3432.16Retrovirus-related Pol polyprotein from transposon... [more]
A0A0C3AUA9_9AGAM2.990e-3431.92Uncharacterized protein (Fragment) n=1 Tax=Serendi... [more]
A0A401GQU1_9APHY3.110e-3432.68Uncharacterized protein n=3 Tax=Sparassis crispa T... [more]
A0A060SPD4_PYCCI4.170e-3432.94Integrase catalytic domain-containing protein n=1 ... [more]
A0A1M2VT27_TRAPU2.900e-3332.03Retrovirus-related Pol polyprotein from transposon... [more]
A0A6H5KP70_9PHAE3.470e-3330.23Uncharacterized protein n=4 Tax=Ectocarpus sp. CCA... [more]
A0A401GN13_9APHY6.750e-3332.95Uncharacterized protein n=1 Tax=Sparassis crispa T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR11439:SF275coord: 138..224
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 79..98
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..78
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 99..230
NoneNo IPR availableTMHMMTMhelixcoord: 79..101
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 138..224

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig93448contigH-elongata_contig93448:594..1376 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig93448.16784.1mRNA_H-elongata_contig93448.16784.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig93448 594..1376 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig93448.16784.1 ID=prot_H-elongata_contig93448.16784.1|Name=mRNA_H-elongata_contig93448.16784.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=231bp
IKDLGESSYYLGCPITQDRNAWTLTFEEHQYIQTMAERFGVTKTSIIPSV
AGEKALSKSDSPQADAEVKEMRQIPYREIVGALMWAATMTMPGILFAAHQ
LAKFNDNPGPTHWRAAQKALQYLWRTRDIGMEGSRGGGPTISWFSRVQKV
TAAASSESEHVALAEMVSELRFLRQVKEFMTPPIDVAIKIHKDNKSAIKM
AKTRFSSRRTRHVDIMHHIVRDAIEGEVFT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039537Retrotran_Ty1/copia-like