prot_H-elongata_contig93422.16783.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig93422.16783.1
Unique Nameprot_H-elongata_contig93422.16783.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length51
Homology
BLAST of mRNA_H-elongata_contig93422.16783.1 vs. uniprot
Match: A0A6H5KG52_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KG52_9PHAE)

HSP 1 Score: 79.7 bits (195), Expect = 3.780e-16
Identity = 39/50 (78.00%), Postives = 43/50 (86.00%), Query Frame = 0
Query:    3 RDILLSTKRTSSGGDVWVCVNRLCGR-RDLVVVCLASNEADPLRVTIEFE 51
            RDILLSTKRTSSGGDVWVCV+RLCG  R+LVVVC ASNE D L ++ EFE
Sbjct:  317 RDILLSTKRTSSGGDVWVCVDRLCGMSRELVVVCPASNETDSLHISAEFE 366          
BLAST of mRNA_H-elongata_contig93422.16783.1 vs. uniprot
Match: D8LM66_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM66_ECTSI)

HSP 1 Score: 69.3 bits (168), Expect = 1.660e-12
Identity = 32/43 (74.42%), Postives = 38/43 (88.37%), Query Frame = 0
Query:   10 KRTSSGGDVWVCVNRLCGR-RDLVVVCLASNEADPLRVTIEFE 51
            +RTSSGGDVWVCV+RLCG  R+LVVVC A+NEADPL ++ EFE
Sbjct:  149 ERTSSGGDVWVCVDRLCGMSRELVVVCPATNEADPLHISAEFE 191          
BLAST of mRNA_H-elongata_contig93422.16783.1 vs. uniprot
Match: D7G7X5_ECTSI (PH domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7X5_ECTSI)

HSP 1 Score: 50.4 bits (119), Expect = 7.840e-6
Identity = 23/46 (50.00%), Postives = 33/46 (71.74%), Query Frame = 0
Query:    3 RDILLSTKRTSSGGDVWVCVNRLCGRRDLVVVCLASNEADPLRVTI 48
            RD+LL+  RT+SGGD ++ V+ LC    LVV+  AS EA+PL +T+
Sbjct:  229 RDVLLACDRTTSGGDTYLVVDNLCRNPPLVVLVPASQEAEPLDITV 274          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig93422.16783.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KG52_9PHAE3.780e-1678.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LM66_ECTSI1.660e-1274.42Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G7X5_ECTSI7.840e-650.00PH domain-containing protein n=1 Tax=Ectocarpus si... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig93422contigH-elongata_contig93422:608..760 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig93422.16783.1mRNA_H-elongata_contig93422.16783.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig93422 608..760 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig93422.16783.1 ID=prot_H-elongata_contig93422.16783.1|Name=mRNA_H-elongata_contig93422.16783.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=51bp
YGRDILLSTKRTSSGGDVWVCVNRLCGRRDLVVVCLASNEADPLRVTIEF
E
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