prot_H-elongata_contig92855.16737.1 (polypeptide) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig92855.16737.1 vs. uniprot
Match: A0A438GKX8_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438GKX8_VITVI) HSP 1 Score: 154 bits (390), Expect = 3.230e-38 Identity = 110/361 (30.47%), Postives = 177/361 (49.03%), Query Frame = 0
Query: 3 EAQASLEWPQWKRAIAREMDGQTARGVWQVVERPKGKTVVGTRVVFKLKIDKDGRIEKYKCRLVAQGFRQVKGIHYEESSSATPAQDSIRMLLSMITALDWEARQLDVDMAYLEADVEEEIYVELPEAY--RDSRKQAGLLRKAMCGLQ----------------AVRD----------LCSCFPIKDLGEASHCLGCHITRDRNAGKLKFDQHQYIQTVAERVAIFMAHSGPRDH-LRRGIGGGTKLSAWINADYRTCPDTRRSVLGGAVMMAGGAISWFSRVQKVTVAASSESE---------HGA-LAEMVNELRFLRQVKEFMPPPIDVAIKIHEDNEGVIKMAKNRFSSRRTRQVD 324
+A + E W A+ EM VW +VE P G +G + VFK K D G IE+YK RLVA+GF Q +GI Y E+ S +DS+R++L+++ D E +Q+DV A+L ++EEE+Y++ PE + D + L+K++ GL A D L F +KD+GEAS+ +G I RDR G+ + + A++V ++ G +D+ L ++ + ++D+ C D+R+S ++AGGAISW S Q +T ++ E+E HG L ++ LR + + + I+ DN + MAKN S R++ +D
Sbjct: 894 QAMSCKESELWYNAMKDEMSSMKCNDVWDLVELPNGVKTIGCKWVFKTKKDSLGNIERYKARLVAKGFTQKEGIDYTETFSLVSKKDSLRIILALVAHFDLELQQMDVKTAFLNGELEEEVYMKQPEGFPSSDGEQLVCKLKKSIYGLNGSKVCFLVLYVDDILLATNDKGLLHEVKQFLSKNFDMKDMGEASYVIGIKIHRDRFKGRYQSNPSIDHWKAAKKVMRYL--QGTKDYKLMYRRTSNLEVVGYSDSDFAGCVDSRKSTSEYIFILAGGAISWRSVKQTMTATSTMEAEFISCFEATSHGVWLKSFISGLRVMDSISR--------PLSIYCDNSAAVFMAKNNKSGSRSKHID 1244
BLAST of mRNA_H-elongata_contig92855.16737.1 vs. uniprot
Match: UPI0005C8B2E3 (uncharacterized protein LOC101303284 n=1 Tax=Fragaria vesca subsp. vesca TaxID=101020 RepID=UPI0005C8B2E3) HSP 1 Score: 152 bits (385), Expect = 1.560e-37 Identity = 92/317 (29.02%), Postives = 165/317 (52.05%), Query Frame = 0
Query: 11 PQWKRAIAREMDGQTARGVWQVVERPKGKTVVGTRVVFKLKIDKDGRIEKYKCRLVAQGFRQVKGIHYEESSSATPAQDSIRMLLSMITALDWEARQLDVDMAYLEADVEEEIYVELPEAYRDSRKQAGLLRKAMCGLQAVRDLCSCFPIKDLGEASHCLGCH---ITRDRNAGKLKFDQHQYIQTVAERVAIFMAHSGPRDHLRRGIGGGTKLSAWINADYRTCPDTRRSVLGGAVMMAGGAISWFSRVQKVTVAASSESEHGALAEMVNELRFLRQVKEFMPPPIDVAIKIHEDNEGVIKMAKNRFSSRRTRQVD 324
P+W +A+ E++ W +V +P GK VG R VF +K+ DG I++YK RLVA+G+ Q GI YEE+ ++ +++R+L+S+ DW RQ DV A+L ++EEE+Y+++P + AG RK + L A + C P++ E +H L + + D+ + + ++I V R+ ++ + + L G ++ + +AD+ RRS G + G ++W S+ QKV +S+E+E +A V E+ ++R + + + + + +H DN I++A N RT+ V+
Sbjct: 377 PKWTQAMNEELEALQINSTWDIVPKPAGKKTVGCRWVFTVKLKADGSIDRYKARLVAKGYTQRYGIDYEETFASVAKINTVRILISLAATKDWPLRQFDVKNAFLNGNLEEEVYMDMPPGVKSRPCDAGK-RKYVLDLLAKTGMFDCKPVETPIEMNHNLAIYPNQVPADKRSQFMHCPNKEHIDAVY-RILKYLKMAPRKGFLFEKKMGELEVVGYTDADWVGDKTDRRSTSGYFTFVGGNLVTWRSKKQKVAARSSAEAEFRGMAHGVCEMLWIRNMLKELGLKLKQPMALHCDNTSAIEIAHNPVQHDRTKHVE 691
BLAST of mRNA_H-elongata_contig92855.16737.1 vs. uniprot
Match: A0A2N9GVI4_FAGSY (Integrase catalytic domain-containing protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9GVI4_FAGSY) HSP 1 Score: 147 bits (370), Expect = 1.460e-35 Identity = 101/319 (31.66%), Postives = 160/319 (50.16%), Query Frame = 0
Query: 11 PQWKRAIAREMDGQTARGVWQVVERPKGKTVVGTRVVFKLKIDKDGRIEKYKCRLVAQGFRQVKGIHYEESSSATPAQDSIRMLLSMITALDWEARQLDVDMAYLEADVEEEIYVELPEAYRDSRKQAGLLRKAMCGLQAVRDLCSCFPIKDLGEASHCLGCHITRDRNAGKLKFDQHQYIQTVAERVAI---FMAHSGPRDHLRRGIGGGTKLSAWINADYRTC--PDTRRSVLGGAVMMAGGAISWFSRVQKVTVAASSESEHGALAEMVNELRFLRQVKEFMPPPIDVAIKIHEDNEGVIKMAKNRFSSRRTRQVD 324
P W++A+ E+D G W +V+ P GK+ +G + V+K+K DG +++YK RLVA+GF Q GI YEE+ + S+R L+++ + W Q+DV A+L ++ EE+Y++LP + + G K + L+ R L F +KDLG S+ LG ++ +A H ++ V I FMA PR S A R P RRS G ++ ISW S+ Q V +S+E+E+ ALA+ EL +LR + + + A+ IH DN+ I++A N RT+ ++
Sbjct: 978 PLWQQAMKEELDALLKTGTWDLVDLPAGKSAIGCKWVYKIKTRSDGTVDRYKARLVAKGFTQEYGIDYEETFAPVARLSSVRTLIAVSASRHWPLFQMDVKNAFLNGELTEEVYMQLPPGFS---QPPGFSHKGIQDLK--RFLGQHFEMKDLGPLSYFLGLEVSSSSDASWESCLSHCTRPDISYAVHIVSQFMA--APR-------------SLHYAAVLRILRGPTDRRSTTGYCFLLGDSLISWRSKKQSVVARSSTEAEYRALADTTAELLWLRWLLQDLGIDCSTAVPIHCDNQSAIQIAHNDVFHERTKHIE 1276
BLAST of mRNA_H-elongata_contig92855.16737.1 vs. uniprot
Match: A0A438I2X3_VITVI (Retrovirus-related Pol polyprotein from transposon RE1 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438I2X3_VITVI) HSP 1 Score: 144 bits (364), Expect = 2.480e-35 Identity = 94/318 (29.56%), Postives = 162/318 (50.94%), Query Frame = 0
Query: 7 SLEWPQWKRAIAREMDGQTARGVWQVVERPKGKTVVGTRVVFKLKIDKDGRIEKYKCRLVAQGFRQVKGIHYEESSSATPAQDSIRMLLSMITALDWEARQLDVDMAYLEADVEEEIYVELPEAYRDSRKQAGLLRKAMCGLQAVRDLCSCFPIKDLGEASHCLGCHITRDRNAGKLKFDQHQYIQTVAERVAIFMAHSGPRDHLRRGIGGGTKLSAWINADYRTCPDTRRSVLGGAVMMAGGAISWFSRVQKVTVAASSESEHGALAEMVNELRFLRQVKEFMPPPIDVAIKIHEDNEGVIKMAKNRFSSRRTRQVD 324
+L+ P+ K+AI EM W+V+ PKGKT VG + VF +K + +G +E+YK RLVA+GF Q GI Y E+ + +++R+LLS+ LDW +QLDV A+L ++EEE+Y++ P + + RK S + +K A +++ Y+Q ++ +F+ HS L + A+ +AD+ RRS G + G ++W S+ Q V +S+E+E+ A+A V E+ +L+++ E + P+++ +K++ DN+ I +A N RT+ V+
Sbjct: 240 ALQVPELKKAIFEEMRALEKNHTWEVMGLPKGKTTVGCKWVFTVKYNSNGSLERYKARLVAKGFTQTYGIDYLETFALVAKLNTVRVLLSIAANLDWPLQQLDVKNAFLNGNLEEEVYMDPPPRFDEHFGSKVCKRKK-----------SLYGLKQSPRAWFERLTQFVKNQG----------YVQAQSDHT-MFIKHSNDGKGLFFKKSEEKTIEAYTDADWAGSVTDRRSTSGYCTYIWGNLVTWRSKKQSVVARSSAEAEYRAMAHGVCEILWLKKILEELKRPLEMPMKLYCDNKAAISIAHNPVQHDRTKHVE 535
BLAST of mRNA_H-elongata_contig92855.16737.1 vs. uniprot
Match: A0A438EA92_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438EA92_VITVI) HSP 1 Score: 145 bits (367), Expect = 3.300e-35 Identity = 100/337 (29.67%), Postives = 166/337 (49.26%), Query Frame = 0
Query: 7 SLEWPQWKRAIAREMDGQTARGVWQVVERPKGKTVVGTRVVFKLKIDKDGRIEKYKCRLVAQGFRQVKGIHYEESSSATPAQDSIRMLLSMITALDWEARQLDVDMAYLEADVEEEIYVELPEAYRDSRKQAGLLRKAMC------------------GLQAVRD-LCSCFPIKDLGEASHCLGCHITRDRNAGKLKFDQHQYIQTVAERVAIFMAHSGPRDHLRRGIGGGTKLSAWINADYRTCPDTRRSVLGGAVMMAGGAISWFSRVQKVTVAASSESEHGALAEMVNELRFLRQVKEFMPPPIDVAIKIHEDNEGVIKMAKNRFSSRRTRQVD 324
+L P W++A+ EM + G W +V P GK+ VG R V+ +K+ DG++++ K RLVA+G+ QV G Y ++ S S+R+LLSM W QLD+ A+L D+ EE+Y+E P + +LR ++C G+Q ++ L + F KDLG+ + LG I + + L Q +Y + E+ + P + G T++ + +AD+ P RRS G V + G ISW S+ Q V +S+E+E+ A+A EL +LR + + + +K+ DN+ + +A N RT+ ++
Sbjct: 622 ALSHPGWRQAMVDEMVALHSNGTWDLVVLPSGKSTVGCRWVYAVKVGPDGQVDRLKARLVAKGYTQVYGSDYGDTFSPVAKIASVRLLLSMAAMCSWPLYQLDIKNAFLHGDLAEEVYMEQPPGF--------VLRGSLCIYLVVYVDDIVITGSDQDGIQKLKQHLFTHFQTKDLGKLKYFLGIEIAQSSSGVVLS--QRKYALDILEK------NRTPGQGVLYENRGHTQVVGYTDADWAGSPTDRRSTSGYCVFIGGNLISWKSKKQDVVARSSAEAEYRAMALATCELIWLRHLLQELRFGKAEQMKLICDNQAALHIASNPVFHERTKHIE 942
BLAST of mRNA_H-elongata_contig92855.16737.1 vs. uniprot
Match: A0A2N9I8F7_FAGSY (Uncharacterized protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9I8F7_FAGSY) HSP 1 Score: 145 bits (367), Expect = 3.510e-35 Identity = 114/354 (32.20%), Postives = 177/354 (50.00%), Query Frame = 0
Query: 3 EAQASLEWPQWKRAIAREMDGQTARGVWQVVERPKGKTVVGTRVVFKLK---IDKDGRIEKYKCRLVAQGFRQVKGIHYEESSSATPAQDSIRMLLSMITALDWEARQLDVDMAYLEADVEEEIYVELPEAYRD--SRKQAGLLRKAMCGL-QAVRD--------LCSCFPIKDLGEASHCLGCHITRDRNAGK---LKFDQHQYIQTVAERVA------------IFMAHSGPRDH--LRRGIGGGTKLSAWINADYRTCPDTRRSVLGGAVMMAGGAISWFSRVQKVTVAASSESEHGALAEMVNELRFLRQ-VKEFMPPPIDVAIKIHEDNEGVIKMAKNRFSSRRTRQVD 324
EA S E +W A+ E + + W++ E PKGK +G + VFK K +K+G E++K RLVA+G+ Q GI Y+E S SIR +L+++ D E QLDV A+L ++EEEI++E PE ++ + L+K++ GL Q+ R L F +KDLG A LG I R + K + HQ + TV+ +A IF G +H L G + +++ADY D RRS G ++GG I W S +Q + +++E+E+ A+AE E +L+ VKE +++H D++ I +AKN+ RT+ +D
Sbjct: 759 EAIESSEKDKWMEAMVEENESLSKNKTWELTELPKGKKPIGCKWVFKKKEAVSEKEG--ERFKARLVAKGYSQRHGIDYDEVFSPVVRHTSIRAVLALVADQDLELEQLDVKTAFLHGNLEEEIFMEQPEGFKQPGTENLVCRLKKSLYGLKQSPRQWYKRLKSLLHKEFEMKDLGAAKKILGMEIHRRQRGKKAVVVSEKLHQEVSTVSRYMANPGREHWNAVKWIFRYLKGTAEHGILFSRQPGTNSVVGYVDADYAGEVDDRRSTTGYVFTLSGGPICWKSTLQSIVAMSTTEAEYMAVAEAAKEALWLKGLVKELGLN--QGGVQMHCDSQSAIYLAKNQVYHARTKHID 1108
BLAST of mRNA_H-elongata_contig92855.16737.1 vs. uniprot
Match: A0A438J7P8_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438J7P8_VITVI) HSP 1 Score: 140 bits (352), Expect = 2.500e-33 Identity = 95/344 (27.62%), Postives = 159/344 (46.22%), Query Frame = 0
Query: 5 QASLEWPQWKRAIAREMDGQTARGVWQVVERPKGKTVVGTRVVFKLKIDKDGRIEKYKCRLVAQGFRQVKGIHYEESSSATPAQDSIRMLLSMITALDWEARQLDVDMAYLEADVEEEIYVELPEAYRDSRKQAGLLRKAMCGLQAVRDLCSCFPIKDLGEASHCLGCHITRDRNAGKLKFDQHQYIQTVAERVAIFMAH-----------------SGPRDHLR--RGIG-----GGTKLSAWINADYRTCPDTRRSVLGGAVMMAGGAISWFSRVQKVTVAASSESEHGALAEMVNELRFLRQVKEFMPPPIDVAIKIHEDNEGVIKMAKNRFSSRRTRQVD 324
Q + ++P+WK A+ E+ G W++ + P+GK VG + +F +K DG +++YK LVA+GF Q GI Y+E+ + +++R+LLS+ LDW QLDV A+L D+EEE+Y+++P GL+ + F IKDLG + LG I R + + Q +Y+ + + S P D R R +G T+ + RRS G + G ++W S+ Q V S+E+ A+A+ + E +L ++ E + P+ + ++ DN+ I +AKN RT+ V+
Sbjct: 364 QEAFKYPKWKAAVDEEVWALEKNGTWEITDLPRGKKPVGCKWIFTVKYKADGNVDRYKAPLVAKGFTQSYGIDYQETFAPVSKLNTVRVLLSLAANLDWSLHQLDVKNAFLNGDLEEEVYMDIP-----------------VGLETTSNFNKEFEIKDLGNLKYFLGMEIARSKKG--IAVSQRKYVLDLLNETGMLGCKPTETPMDTTVKLEESDGSAPVDKRRYQRLMGKLIYLSHTRPDIGFSVSVAGSVTDRRSTSGYCSFVWGNLVTWRSKKQSVVARNSAEAGFRAMAQGICEGIWLNRLLEELRVPLKHPMVLYCDNQATISIAKNPVHHDRTKHVE 688
BLAST of mRNA_H-elongata_contig92855.16737.1 vs. uniprot
Match: A0A438K8F4_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438K8F4_VITVI) HSP 1 Score: 139 bits (351), Expect = 3.980e-33 Identity = 90/304 (29.61%), Postives = 150/304 (49.34%), Query Frame = 0
Query: 3 EAQASLEWPQWKRAIAREMDGQTARGVWQVVERPKGKTVVGTRVVFKLKIDKDGRIEKYKCRLVAQGFRQVKGIHYEESSSATPAQDSIRMLLSMITALDWEARQLDVDMAYLEADVEEEIYVELPEAYRDSRK--QAGLLRKAMCGLQA-----VRDLCSCFPIKDLGEASHCLGCHITRDRN--AGKLKFDQH--------QYIQTVAERVAIFMAHSGPRDHLRRGIGGGT------------KLSAWINADYRTCPDTRRSVLGGAVMMAGGAISWFSRVQKVTVAASSESEHGALAEMV 277
E + ++P+WK A+ E+ G W++ + P+GK VG + +F +K DG +++YK RLVA+GF Q GI Y+E+ + +++R+LLS+ LDW QLDV A+L D+EEE+Y+++P + + LRK++ GL+ F IKDLG + LG I R+ AG+ + + + Q + E + + +S H R IG +L + +AD+ RRS G + G ++W S+ Q V +S+E+E A+A+ +
Sbjct: 462 EYSEAFKYPKWKAAVDEEVRALEKNGTWEITDLPRGKKPVGCKWIFTVKYKADGNVDRYKARLVAKGFTQSYGIDYQETFAPVAKLNTVRVLLSLAANLDWSLHQLDVKNAFLNGDLEEEVYMDIPAGLETTSNFNKVCRLRKSLYGLKQSPRAWFERFTKEFEIKDLGNLKYFLGMEIARNARMQAGRNTYGYNCQTGRKVMEVRQLIKEDINVLWGNSSI-SHTRPDIGFSVSVGLFFQRTTKKRLKFFQDADWAGSVTDRRSTSGYCSFVWGNLVTWRSKKQSVVARSSAEAEFRAMAQSI 764
BLAST of mRNA_H-elongata_contig92855.16737.1 vs. uniprot
Match: A0A438DIG7_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438DIG7_VITVI) HSP 1 Score: 139 bits (351), Expect = 4.390e-33 Identity = 99/342 (28.95%), Postives = 167/342 (48.83%), Query Frame = 0
Query: 5 QASLEWPQWKRAIAREMDGQTARGVWQVVERPKGKTVVGTRVVFKLKIDKDGRIEKYKCRLVAQGFRQVKGIHYEESSSATPAQDSIRMLLSMITALDWEARQLDVDMAYLEADVEEEIYVELP---EAYRDSRKQAGLLRKAMCGLQAVRDLCSCFPIKDLGEASHCLGCHIT---------RDRNAGKLKFDQHQYIQTVAERVAIFMAHSGPRDHLRRGIGGGTKL----------SAWINADYRTCPDTRRSVLGGAVMMAGGAISWFSRVQKVTVAASSESEHGALAEMVNELRFLRQVKEFMPPPIDVAIKIHEDNEGVIKMAKNRFSSRRTRQVD 324
Q +L+ P+WK A+ E+ G W++ E P+GK G + +F +K + DG I ++K RLVA+GF Q GI YEE+ + +SIR+LLS+ LDW QLDV A+L ++EEE+Y+++P E +S K A L R+ + + DL + + LGC D++ D+ +Y + V + I++ H+ P + G L + +AD+ RRS G M G ++W S+ Q V +S+E++ A+A + E +L+++ + + + + + DN+ I +AKN RT+ V+
Sbjct: 600 QEALQQPEWKTAVQEEIQALEKNGTWEISELPEGKRPAGCKWIFTVKHNPDGSINRFKARLVAKGFTQSYGIDYEETFAPVAKLNSIRVLLSVAVNLDWNLHQLDVKNAFLNGELEEEVYMKIPPSMETPENSGKLAELRRELWSRKRKY--------VLDLLQETGMLGCKPVDTPMDPIGKTDKDNDSHPTDKDKYQRLVGK--LIYLTHTRPDIGFAVSMSPGRGLYFKKTSSREVEVFTDADWAGSLTDRRSTTGYCSYMWGNLVTWRSKKQSVVARSSAEAKFKAMAHGICEGTWLQRILKELGIISNSTMTVLCDNKATISIAKNPVQHDRTKHVE 931
BLAST of mRNA_H-elongata_contig92855.16737.1 vs. uniprot
Match: A0A438FAW7_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438FAW7_VITVI) HSP 1 Score: 139 bits (350), Expect = 6.010e-33 Identity = 91/293 (31.06%), Postives = 150/293 (51.19%), Query Frame = 0
Query: 5 QASLEWPQWKRAIAREMDGQTARGVWQVVERPKGKTVVGTRVVFKLKIDKDGRIEKYKCRLVAQGFRQVKGIHYEESSSATPAQDSIRMLLSMITALDWEARQLDVDMAYLEADVEEEIYVELPEAYRDSRKQAGLLRKAMCGLQAVRDLCSCFPIKDLGEASHCLGCHITRDRNAGKLKFDQHQYIQ---------TVAERVAIFMAHSGPRDHLRRGIGGGTKLSA----WINADY---RTCPDT---RRSVLGGAVMMAGGAISWFSRVQKVTVAASSESEHGALAEMVN 278
Q +L+ +WK+A+ E+D G W + + P GK VG + +F +K DG +E++K RLVA+GF Q GI Y+E+ + ++IR+LLS+ DW +QLD+ A+L D+EEE+Y+E+P + +S + L+K L F +KDLG + LG + R R + Q +YI + A R I+++H+ P + + G S+ + Y R +T RRS G + G ++W S+ Q V +S+E+E+ ALA+ ++
Sbjct: 673 QEALKISEWKKAVQDEIDALEKNGTWTITDLPVGKRPVGCKWIFTIKYKADGSVERFKARLVARGFTQSYGIDYQETFAPVAKLNTIRILLSLAVNQDWCLQQLDIKNAFLNGDLEEEVYMEIPPGFEESMAKNQNLKKY---------LSEEFEVKDLGNLKYFLGMEVARSRKG--IVVSQRKYILDLLRRPGEISAACRALIYLSHTRP--DIGFAVSAGKAYSSERQRTVTLKYIQMRIGQETSLNRRSTSGYCSFVWGNLVTWRSKKQSVVARSSAEAEYRALAQGIS 952 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig92855.16737.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-elongata_contig92855.16737.1 ID=prot_H-elongata_contig92855.16737.1|Name=mRNA_H-elongata_contig92855.16737.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=324bpback to top |