prot_H-elongata_contig92855.16737.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig92855.16737.1
Unique Nameprot_H-elongata_contig92855.16737.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length324
Homology
BLAST of mRNA_H-elongata_contig92855.16737.1 vs. uniprot
Match: A0A438GKX8_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438GKX8_VITVI)

HSP 1 Score: 154 bits (390), Expect = 3.230e-38
Identity = 110/361 (30.47%), Postives = 177/361 (49.03%), Query Frame = 0
Query:    3 EAQASLEWPQWKRAIAREMDGQTARGVWQVVERPKGKTVVGTRVVFKLKIDKDGRIEKYKCRLVAQGFRQVKGIHYEESSSATPAQDSIRMLLSMITALDWEARQLDVDMAYLEADVEEEIYVELPEAY--RDSRKQAGLLRKAMCGLQ----------------AVRD----------LCSCFPIKDLGEASHCLGCHITRDRNAGKLKFDQHQYIQTVAERVAIFMAHSGPRDH-LRRGIGGGTKLSAWINADYRTCPDTRRSVLGGAVMMAGGAISWFSRVQKVTVAASSESE---------HGA-LAEMVNELRFLRQVKEFMPPPIDVAIKIHEDNEGVIKMAKNRFSSRRTRQVD 324
            +A +  E   W  A+  EM       VW +VE P G   +G + VFK K D  G IE+YK RLVA+GF Q +GI Y E+ S    +DS+R++L+++   D E +Q+DV  A+L  ++EEE+Y++ PE +   D  +    L+K++ GL                 A  D          L   F +KD+GEAS+ +G  I RDR  G+ + +        A++V  ++   G +D+ L        ++  + ++D+  C D+R+S      ++AGGAISW S  Q +T  ++ E+E         HG  L   ++ LR +  +           + I+ DN   + MAKN  S  R++ +D
Sbjct:  894 QAMSCKESELWYNAMKDEMSSMKCNDVWDLVELPNGVKTIGCKWVFKTKKDSLGNIERYKARLVAKGFTQKEGIDYTETFSLVSKKDSLRIILALVAHFDLELQQMDVKTAFLNGELEEEVYMKQPEGFPSSDGEQLVCKLKKSIYGLNGSKVCFLVLYVDDILLATNDKGLLHEVKQFLSKNFDMKDMGEASYVIGIKIHRDRFKGRYQSNPSIDHWKAAKKVMRYL--QGTKDYKLMYRRTSNLEVVGYSDSDFAGCVDSRKSTSEYIFILAGGAISWRSVKQTMTATSTMEAEFISCFEATSHGVWLKSFISGLRVMDSISR--------PLSIYCDNSAAVFMAKNNKSGSRSKHID 1244          
BLAST of mRNA_H-elongata_contig92855.16737.1 vs. uniprot
Match: UPI0005C8B2E3 (uncharacterized protein LOC101303284 n=1 Tax=Fragaria vesca subsp. vesca TaxID=101020 RepID=UPI0005C8B2E3)

HSP 1 Score: 152 bits (385), Expect = 1.560e-37
Identity = 92/317 (29.02%), Postives = 165/317 (52.05%), Query Frame = 0
Query:   11 PQWKRAIAREMDGQTARGVWQVVERPKGKTVVGTRVVFKLKIDKDGRIEKYKCRLVAQGFRQVKGIHYEESSSATPAQDSIRMLLSMITALDWEARQLDVDMAYLEADVEEEIYVELPEAYRDSRKQAGLLRKAMCGLQAVRDLCSCFPIKDLGEASHCLGCH---ITRDRNAGKLKFDQHQYIQTVAERVAIFMAHSGPRDHLRRGIGGGTKLSAWINADYRTCPDTRRSVLGGAVMMAGGAISWFSRVQKVTVAASSESEHGALAEMVNELRFLRQVKEFMPPPIDVAIKIHEDNEGVIKMAKNRFSSRRTRQVD 324
            P+W +A+  E++       W +V +P GK  VG R VF +K+  DG I++YK RLVA+G+ Q  GI YEE+ ++    +++R+L+S+    DW  RQ DV  A+L  ++EEE+Y+++P   +     AG  RK +  L A   +  C P++   E +H L  +   +  D+ +  +     ++I  V  R+  ++  +  +  L     G  ++  + +AD+      RRS  G    + G  ++W S+ QKV   +S+E+E   +A  V E+ ++R + + +   +   + +H DN   I++A N     RT+ V+
Sbjct:  377 PKWTQAMNEELEALQINSTWDIVPKPAGKKTVGCRWVFTVKLKADGSIDRYKARLVAKGYTQRYGIDYEETFASVAKINTVRILISLAATKDWPLRQFDVKNAFLNGNLEEEVYMDMPPGVKSRPCDAGK-RKYVLDLLAKTGMFDCKPVETPIEMNHNLAIYPNQVPADKRSQFMHCPNKEHIDAVY-RILKYLKMAPRKGFLFEKKMGELEVVGYTDADWVGDKTDRRSTSGYFTFVGGNLVTWRSKKQKVAARSSAEAEFRGMAHGVCEMLWIRNMLKELGLKLKQPMALHCDNTSAIEIAHNPVQHDRTKHVE 691          
BLAST of mRNA_H-elongata_contig92855.16737.1 vs. uniprot
Match: A0A2N9GVI4_FAGSY (Integrase catalytic domain-containing protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9GVI4_FAGSY)

HSP 1 Score: 147 bits (370), Expect = 1.460e-35
Identity = 101/319 (31.66%), Postives = 160/319 (50.16%), Query Frame = 0
Query:   11 PQWKRAIAREMDGQTARGVWQVVERPKGKTVVGTRVVFKLKIDKDGRIEKYKCRLVAQGFRQVKGIHYEESSSATPAQDSIRMLLSMITALDWEARQLDVDMAYLEADVEEEIYVELPEAYRDSRKQAGLLRKAMCGLQAVRDLCSCFPIKDLGEASHCLGCHITRDRNAGKLKFDQHQYIQTVAERVAI---FMAHSGPRDHLRRGIGGGTKLSAWINADYRTC--PDTRRSVLGGAVMMAGGAISWFSRVQKVTVAASSESEHGALAEMVNELRFLRQVKEFMPPPIDVAIKIHEDNEGVIKMAKNRFSSRRTRQVD 324
            P W++A+  E+D     G W +V+ P GK+ +G + V+K+K   DG +++YK RLVA+GF Q  GI YEE+ +      S+R L+++  +  W   Q+DV  A+L  ++ EE+Y++LP  +    +  G   K +  L+  R L   F +KDLG  S+ LG  ++   +A       H     ++  V I   FMA   PR             S    A  R    P  RRS  G   ++    ISW S+ Q V   +S+E+E+ ALA+   EL +LR + + +      A+ IH DN+  I++A N     RT+ ++
Sbjct:  978 PLWQQAMKEELDALLKTGTWDLVDLPAGKSAIGCKWVYKIKTRSDGTVDRYKARLVAKGFTQEYGIDYEETFAPVARLSSVRTLIAVSASRHWPLFQMDVKNAFLNGELTEEVYMQLPPGFS---QPPGFSHKGIQDLK--RFLGQHFEMKDLGPLSYFLGLEVSSSSDASWESCLSHCTRPDISYAVHIVSQFMA--APR-------------SLHYAAVLRILRGPTDRRSTTGYCFLLGDSLISWRSKKQSVVARSSTEAEYRALADTTAELLWLRWLLQDLGIDCSTAVPIHCDNQSAIQIAHNDVFHERTKHIE 1276          
BLAST of mRNA_H-elongata_contig92855.16737.1 vs. uniprot
Match: A0A438I2X3_VITVI (Retrovirus-related Pol polyprotein from transposon RE1 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438I2X3_VITVI)

HSP 1 Score: 144 bits (364), Expect = 2.480e-35
Identity = 94/318 (29.56%), Postives = 162/318 (50.94%), Query Frame = 0
Query:    7 SLEWPQWKRAIAREMDGQTARGVWQVVERPKGKTVVGTRVVFKLKIDKDGRIEKYKCRLVAQGFRQVKGIHYEESSSATPAQDSIRMLLSMITALDWEARQLDVDMAYLEADVEEEIYVELPEAYRDSRKQAGLLRKAMCGLQAVRDLCSCFPIKDLGEASHCLGCHITRDRNAGKLKFDQHQYIQTVAERVAIFMAHSGPRDHLRRGIGGGTKLSAWINADYRTCPDTRRSVLGGAVMMAGGAISWFSRVQKVTVAASSESEHGALAEMVNELRFLRQVKEFMPPPIDVAIKIHEDNEGVIKMAKNRFSSRRTRQVD 324
            +L+ P+ K+AI  EM        W+V+  PKGKT VG + VF +K + +G +E+YK RLVA+GF Q  GI Y E+ +     +++R+LLS+   LDW  +QLDV  A+L  ++EEE+Y++ P  + +        RK            S + +K    A         +++           Y+Q  ++   +F+ HS     L         + A+ +AD+      RRS  G    + G  ++W S+ Q V   +S+E+E+ A+A  V E+ +L+++ E +  P+++ +K++ DN+  I +A N     RT+ V+
Sbjct:  240 ALQVPELKKAIFEEMRALEKNHTWEVMGLPKGKTTVGCKWVFTVKYNSNGSLERYKARLVAKGFTQTYGIDYLETFALVAKLNTVRVLLSIAANLDWPLQQLDVKNAFLNGNLEEEVYMDPPPRFDEHFGSKVCKRKK-----------SLYGLKQSPRAWFERLTQFVKNQG----------YVQAQSDHT-MFIKHSNDGKGLFFKKSEEKTIEAYTDADWAGSVTDRRSTSGYCTYIWGNLVTWRSKKQSVVARSSAEAEYRAMAHGVCEILWLKKILEELKRPLEMPMKLYCDNKAAISIAHNPVQHDRTKHVE 535          
BLAST of mRNA_H-elongata_contig92855.16737.1 vs. uniprot
Match: A0A438EA92_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438EA92_VITVI)

HSP 1 Score: 145 bits (367), Expect = 3.300e-35
Identity = 100/337 (29.67%), Postives = 166/337 (49.26%), Query Frame = 0
Query:    7 SLEWPQWKRAIAREMDGQTARGVWQVVERPKGKTVVGTRVVFKLKIDKDGRIEKYKCRLVAQGFRQVKGIHYEESSSATPAQDSIRMLLSMITALDWEARQLDVDMAYLEADVEEEIYVELPEAYRDSRKQAGLLRKAMC------------------GLQAVRD-LCSCFPIKDLGEASHCLGCHITRDRNAGKLKFDQHQYIQTVAERVAIFMAHSGPRDHLRRGIGGGTKLSAWINADYRTCPDTRRSVLGGAVMMAGGAISWFSRVQKVTVAASSESEHGALAEMVNELRFLRQVKEFMPPPIDVAIKIHEDNEGVIKMAKNRFSSRRTRQVD 324
            +L  P W++A+  EM    + G W +V  P GK+ VG R V+ +K+  DG++++ K RLVA+G+ QV G  Y ++ S      S+R+LLSM     W   QLD+  A+L  D+ EE+Y+E P  +        +LR ++C                  G+Q ++  L + F  KDLG+  + LG  I +  +   L   Q +Y   + E+      +  P   +     G T++  + +AD+   P  RRS  G  V + G  ISW S+ Q V   +S+E+E+ A+A    EL +LR + + +       +K+  DN+  + +A N     RT+ ++
Sbjct:  622 ALSHPGWRQAMVDEMVALHSNGTWDLVVLPSGKSTVGCRWVYAVKVGPDGQVDRLKARLVAKGYTQVYGSDYGDTFSPVAKIASVRLLLSMAAMCSWPLYQLDIKNAFLHGDLAEEVYMEQPPGF--------VLRGSLCIYLVVYVDDIVITGSDQDGIQKLKQHLFTHFQTKDLGKLKYFLGIEIAQSSSGVVLS--QRKYALDILEK------NRTPGQGVLYENRGHTQVVGYTDADWAGSPTDRRSTSGYCVFIGGNLISWKSKKQDVVARSSAEAEYRAMALATCELIWLRHLLQELRFGKAEQMKLICDNQAALHIASNPVFHERTKHIE 942          
BLAST of mRNA_H-elongata_contig92855.16737.1 vs. uniprot
Match: A0A2N9I8F7_FAGSY (Uncharacterized protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9I8F7_FAGSY)

HSP 1 Score: 145 bits (367), Expect = 3.510e-35
Identity = 114/354 (32.20%), Postives = 177/354 (50.00%), Query Frame = 0
Query:    3 EAQASLEWPQWKRAIAREMDGQTARGVWQVVERPKGKTVVGTRVVFKLK---IDKDGRIEKYKCRLVAQGFRQVKGIHYEESSSATPAQDSIRMLLSMITALDWEARQLDVDMAYLEADVEEEIYVELPEAYRD--SRKQAGLLRKAMCGL-QAVRD--------LCSCFPIKDLGEASHCLGCHITRDRNAGK---LKFDQHQYIQTVAERVA------------IFMAHSGPRDH--LRRGIGGGTKLSAWINADYRTCPDTRRSVLGGAVMMAGGAISWFSRVQKVTVAASSESEHGALAEMVNELRFLRQ-VKEFMPPPIDVAIKIHEDNEGVIKMAKNRFSSRRTRQVD 324
            EA  S E  +W  A+  E +  +    W++ E PKGK  +G + VFK K    +K+G  E++K RLVA+G+ Q  GI Y+E  S      SIR +L+++   D E  QLDV  A+L  ++EEEI++E PE ++   +      L+K++ GL Q+ R         L   F +KDLG A   LG  I R +   K   +    HQ + TV+  +A            IF    G  +H  L     G   +  +++ADY    D RRS  G    ++GG I W S +Q +   +++E+E+ A+AE   E  +L+  VKE         +++H D++  I +AKN+    RT+ +D
Sbjct:  759 EAIESSEKDKWMEAMVEENESLSKNKTWELTELPKGKKPIGCKWVFKKKEAVSEKEG--ERFKARLVAKGYSQRHGIDYDEVFSPVVRHTSIRAVLALVADQDLELEQLDVKTAFLHGNLEEEIFMEQPEGFKQPGTENLVCRLKKSLYGLKQSPRQWYKRLKSLLHKEFEMKDLGAAKKILGMEIHRRQRGKKAVVVSEKLHQEVSTVSRYMANPGREHWNAVKWIFRYLKGTAEHGILFSRQPGTNSVVGYVDADYAGEVDDRRSTTGYVFTLSGGPICWKSTLQSIVAMSTTEAEYMAVAEAAKEALWLKGLVKELGLN--QGGVQMHCDSQSAIYLAKNQVYHARTKHID 1108          
BLAST of mRNA_H-elongata_contig92855.16737.1 vs. uniprot
Match: A0A438J7P8_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438J7P8_VITVI)

HSP 1 Score: 140 bits (352), Expect = 2.500e-33
Identity = 95/344 (27.62%), Postives = 159/344 (46.22%), Query Frame = 0
Query:    5 QASLEWPQWKRAIAREMDGQTARGVWQVVERPKGKTVVGTRVVFKLKIDKDGRIEKYKCRLVAQGFRQVKGIHYEESSSATPAQDSIRMLLSMITALDWEARQLDVDMAYLEADVEEEIYVELPEAYRDSRKQAGLLRKAMCGLQAVRDLCSCFPIKDLGEASHCLGCHITRDRNAGKLKFDQHQYIQTVAERVAIFMAH-----------------SGPRDHLR--RGIG-----GGTKLSAWINADYRTCPDTRRSVLGGAVMMAGGAISWFSRVQKVTVAASSESEHGALAEMVNELRFLRQVKEFMPPPIDVAIKIHEDNEGVIKMAKNRFSSRRTRQVD 324
            Q + ++P+WK A+  E+      G W++ + P+GK  VG + +F +K   DG +++YK  LVA+GF Q  GI Y+E+ +     +++R+LLS+   LDW   QLDV  A+L  D+EEE+Y+++P                  GL+   +    F IKDLG   + LG  I R +    +   Q +Y+  +     +                     S P D  R  R +G       T+     +         RRS  G    + G  ++W S+ Q V    S+E+   A+A+ + E  +L ++ E +  P+   + ++ DN+  I +AKN     RT+ V+
Sbjct:  364 QEAFKYPKWKAAVDEEVWALEKNGTWEITDLPRGKKPVGCKWIFTVKYKADGNVDRYKAPLVAKGFTQSYGIDYQETFAPVSKLNTVRVLLSLAANLDWSLHQLDVKNAFLNGDLEEEVYMDIP-----------------VGLETTSNFNKEFEIKDLGNLKYFLGMEIARSKKG--IAVSQRKYVLDLLNETGMLGCKPTETPMDTTVKLEESDGSAPVDKRRYQRLMGKLIYLSHTRPDIGFSVSVAGSVTDRRSTSGYCSFVWGNLVTWRSKKQSVVARNSAEAGFRAMAQGICEGIWLNRLLEELRVPLKHPMVLYCDNQATISIAKNPVHHDRTKHVE 688          
BLAST of mRNA_H-elongata_contig92855.16737.1 vs. uniprot
Match: A0A438K8F4_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438K8F4_VITVI)

HSP 1 Score: 139 bits (351), Expect = 3.980e-33
Identity = 90/304 (29.61%), Postives = 150/304 (49.34%), Query Frame = 0
Query:    3 EAQASLEWPQWKRAIAREMDGQTARGVWQVVERPKGKTVVGTRVVFKLKIDKDGRIEKYKCRLVAQGFRQVKGIHYEESSSATPAQDSIRMLLSMITALDWEARQLDVDMAYLEADVEEEIYVELPEAYRDSRK--QAGLLRKAMCGLQA-----VRDLCSCFPIKDLGEASHCLGCHITRDRN--AGKLKFDQH--------QYIQTVAERVAIFMAHSGPRDHLRRGIGGGT------------KLSAWINADYRTCPDTRRSVLGGAVMMAGGAISWFSRVQKVTVAASSESEHGALAEMV 277
            E   + ++P+WK A+  E+      G W++ + P+GK  VG + +F +K   DG +++YK RLVA+GF Q  GI Y+E+ +     +++R+LLS+   LDW   QLDV  A+L  D+EEE+Y+++P     +    +   LRK++ GL+             F IKDLG   + LG  I R+    AG+  +  +        +  Q + E + +   +S    H R  IG               +L  + +AD+      RRS  G    + G  ++W S+ Q V   +S+E+E  A+A+ +
Sbjct:  462 EYSEAFKYPKWKAAVDEEVRALEKNGTWEITDLPRGKKPVGCKWIFTVKYKADGNVDRYKARLVAKGFTQSYGIDYQETFAPVAKLNTVRVLLSLAANLDWSLHQLDVKNAFLNGDLEEEVYMDIPAGLETTSNFNKVCRLRKSLYGLKQSPRAWFERFTKEFEIKDLGNLKYFLGMEIARNARMQAGRNTYGYNCQTGRKVMEVRQLIKEDINVLWGNSSI-SHTRPDIGFSVSVGLFFQRTTKKRLKFFQDADWAGSVTDRRSTSGYCSFVWGNLVTWRSKKQSVVARSSAEAEFRAMAQSI 764          
BLAST of mRNA_H-elongata_contig92855.16737.1 vs. uniprot
Match: A0A438DIG7_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438DIG7_VITVI)

HSP 1 Score: 139 bits (351), Expect = 4.390e-33
Identity = 99/342 (28.95%), Postives = 167/342 (48.83%), Query Frame = 0
Query:    5 QASLEWPQWKRAIAREMDGQTARGVWQVVERPKGKTVVGTRVVFKLKIDKDGRIEKYKCRLVAQGFRQVKGIHYEESSSATPAQDSIRMLLSMITALDWEARQLDVDMAYLEADVEEEIYVELP---EAYRDSRKQAGLLRKAMCGLQAVRDLCSCFPIKDLGEASHCLGCHIT---------RDRNAGKLKFDQHQYIQTVAERVAIFMAHSGPRDHLRRGIGGGTKL----------SAWINADYRTCPDTRRSVLGGAVMMAGGAISWFSRVQKVTVAASSESEHGALAEMVNELRFLRQVKEFMPPPIDVAIKIHEDNEGVIKMAKNRFSSRRTRQVD 324
            Q +L+ P+WK A+  E+      G W++ E P+GK   G + +F +K + DG I ++K RLVA+GF Q  GI YEE+ +     +SIR+LLS+   LDW   QLDV  A+L  ++EEE+Y+++P   E   +S K A L R+     +          + DL + +  LGC             D++      D+ +Y + V +   I++ H+ P       +  G  L            + +AD+      RRS  G    M G  ++W S+ Q V   +S+E++  A+A  + E  +L+++ + +    +  + +  DN+  I +AKN     RT+ V+
Sbjct:  600 QEALQQPEWKTAVQEEIQALEKNGTWEISELPEGKRPAGCKWIFTVKHNPDGSINRFKARLVAKGFTQSYGIDYEETFAPVAKLNSIRVLLSVAVNLDWNLHQLDVKNAFLNGELEEEVYMKIPPSMETPENSGKLAELRRELWSRKRKY--------VLDLLQETGMLGCKPVDTPMDPIGKTDKDNDSHPTDKDKYQRLVGK--LIYLTHTRPDIGFAVSMSPGRGLYFKKTSSREVEVFTDADWAGSLTDRRSTTGYCSYMWGNLVTWRSKKQSVVARSSAEAKFKAMAHGICEGTWLQRILKELGIISNSTMTVLCDNKATISIAKNPVQHDRTKHVE 931          
BLAST of mRNA_H-elongata_contig92855.16737.1 vs. uniprot
Match: A0A438FAW7_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438FAW7_VITVI)

HSP 1 Score: 139 bits (350), Expect = 6.010e-33
Identity = 91/293 (31.06%), Postives = 150/293 (51.19%), Query Frame = 0
Query:    5 QASLEWPQWKRAIAREMDGQTARGVWQVVERPKGKTVVGTRVVFKLKIDKDGRIEKYKCRLVAQGFRQVKGIHYEESSSATPAQDSIRMLLSMITALDWEARQLDVDMAYLEADVEEEIYVELPEAYRDSRKQAGLLRKAMCGLQAVRDLCSCFPIKDLGEASHCLGCHITRDRNAGKLKFDQHQYIQ---------TVAERVAIFMAHSGPRDHLRRGIGGGTKLSA----WINADY---RTCPDT---RRSVLGGAVMMAGGAISWFSRVQKVTVAASSESEHGALAEMVN 278
            Q +L+  +WK+A+  E+D     G W + + P GK  VG + +F +K   DG +E++K RLVA+GF Q  GI Y+E+ +     ++IR+LLS+    DW  +QLD+  A+L  D+EEE+Y+E+P  + +S  +   L+K          L   F +KDLG   + LG  + R R    +   Q +YI          + A R  I+++H+ P   +   +  G   S+     +   Y   R   +T   RRS  G    + G  ++W S+ Q V   +S+E+E+ ALA+ ++
Sbjct:  673 QEALKISEWKKAVQDEIDALEKNGTWTITDLPVGKRPVGCKWIFTIKYKADGSVERFKARLVARGFTQSYGIDYQETFAPVAKLNTIRILLSLAVNQDWCLQQLDIKNAFLNGDLEEEVYMEIPPGFEESMAKNQNLKKY---------LSEEFEVKDLGNLKYFLGMEVARSRKG--IVVSQRKYILDLLRRPGEISAACRALIYLSHTRP--DIGFAVSAGKAYSSERQRTVTLKYIQMRIGQETSLNRRSTSGYCSFVWGNLVTWRSKKQSVVARSSAEAEYRALAQGIS 952          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig92855.16737.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A438GKX8_VITVI3.230e-3830.47Retrovirus-related Pol polyprotein from transposon... [more]
UPI0005C8B2E31.560e-3729.02uncharacterized protein LOC101303284 n=1 Tax=Fraga... [more]
A0A2N9GVI4_FAGSY1.460e-3531.66Integrase catalytic domain-containing protein n=1 ... [more]
A0A438I2X3_VITVI2.480e-3529.56Retrovirus-related Pol polyprotein from transposon... [more]
A0A438EA92_VITVI3.300e-3529.67Retrovirus-related Pol polyprotein from transposon... [more]
A0A2N9I8F7_FAGSY3.510e-3532.20Uncharacterized protein n=1 Tax=Fagus sylvatica Ta... [more]
A0A438J7P8_VITVI2.500e-3327.62Retrovirus-related Pol polyprotein from transposon... [more]
A0A438K8F4_VITVI3.980e-3329.61Retrovirus-related Pol polyprotein from transposon... [more]
A0A438DIG7_VITVI4.390e-3328.95Retrovirus-related Pol polyprotein from transposon... [more]
A0A438FAW7_VITVI6.010e-3331.06Retrovirus-related Pol polyprotein from transposon... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 29..149
e-value: 8.8E-28
score: 97.6
NoneNo IPR availablePANTHERPTHR11439:SF273coord: 6..151
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 6..151

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig92855contigH-elongata_contig92855:1168..2561 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig92855.16737.1mRNA_H-elongata_contig92855.16737.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig92855 1168..2561 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig92855.16737.1 ID=prot_H-elongata_contig92855.16737.1|Name=mRNA_H-elongata_contig92855.16737.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=324bp
MGEAQASLEWPQWKRAIAREMDGQTARGVWQVVERPKGKTVVGTRVVFKL
KIDKDGRIEKYKCRLVAQGFRQVKGIHYEESSSATPAQDSIRMLLSMITA
LDWEARQLDVDMAYLEADVEEEIYVELPEAYRDSRKQAGLLRKAMCGLQA
VRDLCSCFPIKDLGEASHCLGCHITRDRNAGKLKFDQHQYIQTVAERVAI
FMAHSGPRDHLRRGIGGGTKLSAWINADYRTCPDTRRSVLGGAVMMAGGA
ISWFSRVQKVTVAASSESEHGALAEMVNELRFLRQVKEFMPPPIDVAIKI
HEDNEGVIKMAKNRFSSRRTRQVD
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2
IPR039537Retrotran_Ty1/copia-like