prot_H-elongata_contig9276.16729.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig9276.16729.1
Unique Nameprot_H-elongata_contig9276.16729.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length488
Homology
BLAST of mRNA_H-elongata_contig9276.16729.1 vs. uniprot
Match: D8LUD2_ECTSI (DRMBL domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LUD2_ECTSI)

HSP 1 Score: 163 bits (413), Expect = 5.290e-40
Identity = 149/390 (38.21%), Postives = 189/390 (48.46%), Query Frame = 0
Query:  114 PFNAKKPWVEGNARVYSVPYSEHSSFPQLKDFVRVVRPKAIVPTVNSASEASVEKMLRYFFEFMDLSRDRKRLDSYFCKRSTPPSGSISTTDDLLAPMSSGTTPAVERPLPKPAKEAQDVRLYSSKGSQQVERVGGTRASGRRPLKVRRMELPSAAPTPQAKR----ENRRIERALLH-----PVKLGAAVPCAGGSGPVTSC-----TTPTTQPCTAGAVDADVSFSGASTAPVTGGATVELSLVDVEAQNAIMADIERRKRRQHQQQREVRAPAQGIVLKACSSVGA-PAEDYAIALEAEREKGSTSGRKRSSVGKTGARVSETPPGAKREYKAALVENTKRLVGGDGVLSETNTGS-SPRTLIVGGKNASAP-PEPMNIRDFFSRRR 486
            P+  KKPWV+G ARVYS+PYSEHSSF QLKDFVR VRPK IVPTVN+ S ASVEKML +F EFMDLS DRKRL+SYFCKR  PPS + S   D+L+  SSG       P   PA++ +     SS G                P  +   E PS  P   A+R    EN       L      P + G A+    G  P          T T +     A+ A    + A     +  + VEL LVDVEAQ AIMADIERRKR Q +                  + GA  A+    + E+ R+    SGRKR++               +  +   +V + K    G   L+E+  G      L +  ++     PEPM+IRDFFSRR+
Sbjct:  363 PWTGKKPWVDGVARVYSLPYSEHSSFTQLKDFVRTVRPKKIVPTVNAVSSASVEKMLSHFLEFMDLSSDRKRLESYFCKRD-PPSATASRGIDMLS--SSGAR--ASNPFSSPAEKRRK-NANSSTGW---------------PPNLFPAEKPSRPPLKAAERNRLHENDATSGTTLDDYPCVPRREGEALRSRAGEQPCGDAGRLPEATMTAEAAVPAAMPARSFVADAGARAASTPSAVELDLVDVEAQKAIMADIERRKRGQQE----------------TKATGAHTAQSGGNSRESRRKSTPGSGRKRTNSSTRSDDGRPADANLRGFFGGKVVSDAK----GTRTLAESVGGCRGHEVLTIDDEDCGTELPEPMDIRDFFSRRK 711          
BLAST of mRNA_H-elongata_contig9276.16729.1 vs. uniprot
Match: A0A7S0PPJ7_MICPS (Hypothetical protein (Fragment) n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0PPJ7_MICPS)

HSP 1 Score: 93.2 bits (230), Expect = 1.690e-18
Identity = 44/84 (52.38%), Postives = 63/84 (75.00%), Query Frame = 0
Query:  116 NAKKPWVE--GNARVYSVPYSEHSSFPQLKDFVRVVRPKAIVPTVNSASEASVEKMLRYFFEFMDLSRDRKRLDSYFC-KRSTP 196
            +A KPW+E  G  RVYSVPYSEHSSF +L +FV+ +RP+ + PTVN+ ++A  ++++++F EF DL+ D+ RLD YF  KRS P
Sbjct:   41 SAYKPWIENDGRTRVYSVPYSEHSSFVELVEFVKRIRPRRVTPTVNADTKADKDRIMKHFLEFTDLAADKNRLDHYFFNKRSAP 124          
BLAST of mRNA_H-elongata_contig9276.16729.1 vs. uniprot
Match: K8YRT5_NANGC (Hydrolase involved in interstrand cross-link repair n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YRT5_NANGC)

HSP 1 Score: 83.6 bits (205), Expect = 1.110e-14
Identity = 38/72 (52.78%), Postives = 51/72 (70.83%), Query Frame = 0
Query:  120 PWV--EGNARVYSVPYSEHSSFPQLKDFVRVVRPKAIVPTVNSASEASVEKMLRYFFEFMDLSRDRKRLDSY 189
            PWV  +  A++Y VPYSEHSS+ +L+ FVR +RP+ I+PTV +  E  VE+ L++F   MDLS DR RLD Y
Sbjct:   59 PWVNPQNGAKLYWVPYSEHSSYTELRSFVRAIRPRKIIPTVGAGDEKGVERQLKHFLADMDLSHDRSRLDRY 130          
BLAST of mRNA_H-elongata_contig9276.16729.1 vs. uniprot
Match: A0A5J4Y9L3_9CHLO (DNA cross-link repair SNM1-like n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4Y9L3_9CHLO)

HSP 1 Score: 85.9 bits (211), Expect = 4.780e-14
Identity = 39/79 (49.37%), Postives = 56/79 (70.89%), Query Frame = 0
Query:  123 EGNARVYSVPYSEHSSFPQLKDFVRVVRPKAIVPTVNSASEASVEKMLRYFFEFMDLSRDRKRLDSYFCKRSTPPSGSI 201
            EGN  +Y +PYSEHSSF +L+D V+ +RPK I+PTVN    AS   ++  F + MDLSRD+ RLDSYF + ++ P+ ++
Sbjct:  342 EGNVTIYGIPYSEHSSFAELRDCVKRLRPKRIIPTVNCPDAASARAIVDRFADLMDLSRDKSRLDSYFGRTASAPADAL 420          
BLAST of mRNA_H-elongata_contig9276.16729.1 vs. uniprot
Match: W7THR8_9STRA (Dna cross-link repair 1a protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7THR8_9STRA)

HSP 1 Score: 83.6 bits (205), Expect = 1.030e-13
Identity = 38/72 (52.78%), Postives = 51/72 (70.83%), Query Frame = 0
Query:  120 PWV--EGNARVYSVPYSEHSSFPQLKDFVRVVRPKAIVPTVNSASEASVEKMLRYFFEFMDLSRDRKRLDSY 189
            PWV  +  A++Y VPYSEHSS+ +L+ FVR +RP+ I+PTV +  E  VE+ L++F   MDLS DR RLD Y
Sbjct:  228 PWVNPQNGAKLYWVPYSEHSSYTELRSFVRAIRPRKIIPTVGAGDEKGVERQLKHFLADMDLSHDRSRLDRY 299          
BLAST of mRNA_H-elongata_contig9276.16729.1 vs. uniprot
Match: A0A4D9CSH8_9STRA (DRMBL domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CSH8_9STRA)

HSP 1 Score: 82.4 bits (202), Expect = 4.780e-13
Identity = 37/72 (51.39%), Postives = 51/72 (70.83%), Query Frame = 0
Query:  120 PWV--EGNARVYSVPYSEHSSFPQLKDFVRVVRPKAIVPTVNSASEASVEKMLRYFFEFMDLSRDRKRLDSY 189
            PWV  +  A++Y VPYSEHSS+ +L+ FVR +RP+ I+PTV +  E  VE+ L++F   MDLS D+ RLD Y
Sbjct:  387 PWVNPQNGAKLYWVPYSEHSSYTELRSFVRAIRPRKIIPTVGAGDEKGVERQLKHFLADMDLSHDKSRLDRY 458          
BLAST of mRNA_H-elongata_contig9276.16729.1 vs. uniprot
Match: A0A8J9WR85_9CHLO (Probable DNA cross-link repair 1A protein at N-terminal half n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9WR85_9CHLO)

HSP 1 Score: 82.4 bits (202), Expect = 6.750e-13
Identity = 37/86 (43.02%), Postives = 58/86 (67.44%), Query Frame = 0
Query:  123 EGNARVYSVPYSEHSSFPQLKDFVRVVRPKAIVPTVNSASEASVEKMLRYFFEFMDLSRDRKRLDSYFCKRSTPPSGSISTTDDLL 208
            EG+  +Y +PYSEHSSF +L+D V+ +RP+ IVPTVN+++ A+   ++  F + MDLS+DR RLD +  K  T P  + S+   ++
Sbjct:  288 EGDVAIYGIPYSEHSSFAELRDCVKTLRPRRIVPTVNASTPAAARSLVDRFADLMDLSKDRSRLDFFLRKAKTAPPATASSAPSVV 373          
BLAST of mRNA_H-elongata_contig9276.16729.1 vs. uniprot
Match: Q00YR2_OSTTA (DNA repair metallo-beta-lactamase n=2 Tax=Ostreococcus tauri TaxID=70448 RepID=Q00YR2_OSTTA)

HSP 1 Score: 79.3 bits (194), Expect = 5.130e-12
Identity = 35/75 (46.67%), Postives = 56/75 (74.67%), Query Frame = 0
Query:  119 KPWVE--GNARVYSVPYSEHSSFPQLKDFVRVVRPKAIVPTVNSASEASVEKML-RYFFEFMDLSRDRKRLDSYF 190
            +PW+E  G  R Y+VPYSEHSS+ +L++F++ ++PK I PTVN+++E   EK++ ++F + +DL  D KR+D YF
Sbjct:  327 EPWIENEGRTRTYAVPYSEHSSYTELREFIKFLKPKRITPTVNASTENEREKLVNKHFLDLVDLKYDVKRIDFYF 401          
BLAST of mRNA_H-elongata_contig9276.16729.1 vs. uniprot
Match: A0A7S0Z9D4_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Ostreococcus mediterraneus TaxID=1486918 RepID=A0A7S0Z9D4_9CHLO)

HSP 1 Score: 78.2 bits (191), Expect = 5.310e-12
Identity = 36/74 (48.65%), Postives = 53/74 (71.62%), Query Frame = 0
Query:  120 PWVE--GNARVYSVPYSEHSSFPQLKDFVRVVRPKAIVPTVNSASEASVEKML-RYFFEFMDLSRDRKRLDSYF 190
            PWVE  G  R YSVPYSEHSS+ +L++FV+  +PK I PTVN+A+    +K++ ++F + +DL +D  +LD YF
Sbjct:   93 PWVENDGRTRTYSVPYSEHSSYTELREFVKFFKPKKITPTVNAATRKERDKLVNKHFLDLVDLKQDSSKLDYYF 166          
BLAST of mRNA_H-elongata_contig9276.16729.1 vs. uniprot
Match: A0A812Y568_SYMPI (Dclre1 protein n=1 Tax=Symbiodinium pilosum TaxID=2952 RepID=A0A812Y568_SYMPI)

HSP 1 Score: 78.2 bits (191), Expect = 1.920e-11
Identity = 36/71 (50.70%), Postives = 49/71 (69.01%), Query Frame = 0
Query:  121 WVE--GNARVYSVPYSEHSSFPQLKDFVRVVRPKAIVPTVNSASEASVEKMLRYFFEFMDLSRDRKRLDSY 189
            W+E  G  RVYSVPYSEHSSF +L+ FV  ++P  ++PTVNS +    E+M+  F E +DL  DR+R+D Y
Sbjct:  303 WIENDGRTRVYSVPYSEHSSFTELQAFVNSIKPGRLIPTVNSETREGKERMMAPFLEVLDLKGDRERMDHY 373          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig9276.16729.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LUD2_ECTSI5.290e-4038.21DRMBL domain-containing protein n=2 Tax=Ectocarpus... [more]
A0A7S0PPJ7_MICPS1.690e-1852.38Hypothetical protein (Fragment) n=1 Tax=Micromonas... [more]
K8YRT5_NANGC1.110e-1452.78Hydrolase involved in interstrand cross-link repai... [more]
A0A5J4Y9L3_9CHLO4.780e-1449.37DNA cross-link repair SNM1-like n=1 Tax=Trebouxia ... [more]
W7THR8_9STRA1.030e-1352.78Dna cross-link repair 1a protein n=1 Tax=Nannochlo... [more]
A0A4D9CSH8_9STRA4.780e-1351.39DRMBL domain-containing protein n=1 Tax=Nannochlor... [more]
A0A8J9WR85_9CHLO6.750e-1343.02Probable DNA cross-link repair 1A protein at N-ter... [more]
Q00YR2_OSTTA5.130e-1246.67DNA repair metallo-beta-lactamase n=2 Tax=Ostreoco... [more]
A0A7S0Z9D4_9CHLO5.310e-1248.65Hypothetical protein (Fragment) n=1 Tax=Ostreococc... [more]
A0A812Y568_SYMPI1.920e-1150.70Dclre1 protein n=1 Tax=Symbiodinium pilosum TaxID=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011084DNA repair metallo-beta-lactamasePFAMPF07522DRMBLcoord: 119..160
e-value: 5.9E-13
score: 49.0
NoneNo IPR availablePANTHERPTHR23240DNA CROSS-LINK REPAIR PROTEIN PSO2/SNM1-RELATEDcoord: 123..186
NoneNo IPR availablePANTHERPTHR23240:SF6DNA CROSS-LINK REPAIR 1A PROTEINcoord: 123..186

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig9276contigH-elongata_contig9276:6614..8329 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig9276.16729.1mRNA_H-elongata_contig9276.16729.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig9276 5662..9047 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig9276.16729.1 ID=prot_H-elongata_contig9276.16729.1|Name=mRNA_H-elongata_contig9276.16729.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=488bp
MAAKARGRKGWDDGGGIRGMLSDVDASAEGLKKEATMDGLEEGDGEGVRN
SSLGEASATAGSGDGDDRDDEAAAWGGGGVSEEELEAGDDEQYSSYGERR
GATEALASPGEREPFNAKKPWVEGNARVYSVPYSEHSSFPQLKDFVRVVR
PKAIVPTVNSASEASVEKMLRYFFEFMDLSRDRKRLDSYFCKRSTPPSGS
ISTTDDLLAPMSSGTTPAVERPLPKPAKEAQDVRLYSSKGSQQVERVGGT
RASGRRPLKVRRMELPSAAPTPQAKRENRRIERALLHPVKLGAAVPCAGG
SGPVTSCTTPTTQPCTAGAVDADVSFSGASTAPVTGGATVELSLVDVEAQ
NAIMADIERRKRRQHQQQREVRAPAQGIVLKACSSVGAPAEDYAIALEAE
REKGSTSGRKRSSVGKTGARVSETPPGAKREYKAALVENTKRLVGGDGVL
SETNTGSSPRTLIVGGKNASAPPEPMNIRDFFSRRRR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011084DRMBL