prot_H-elongata_contig9276.16728.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig9276.16728.1
Unique Nameprot_H-elongata_contig9276.16728.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length236
Homology
BLAST of mRNA_H-elongata_contig9276.16728.1 vs. uniprot
Match: A0A6H5KIJ2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIJ2_9PHAE)

HSP 1 Score: 218 bits (556), Expect = 1.370e-66
Identity = 129/206 (62.62%), Postives = 153/206 (74.27%), Query Frame = 0
Query:   11 GGMLALLREGGGFVFPD-KPSNTPPLKQGEEKRNYEERRNRLLQLREQKDYARMTSNIQRAPRETVRDIQVSFRFQAGMGANMILAVLTAFIISYWASKFFIRDNISHRIVIGLVGAVFMMLVELLVFVMRSLKADRVVEDARKEAELSHTAVGVHRSGFSPPLSPRVPRT-GGRGLLEMKKDEDRGLDETVARRIGEDTVEELLP 214
            GG+L LL +GGG VFPD + + +  +K GEEKR Y+ERR+RLL LREQK+Y RM  NIQRAPRETVRDIQ SF+FQ GMGANM++AV T FIISYWASKF + DN SHR+VIGLVGA+F+MLVELLVFV RSLKAD V+EDAR++AE SHTAVGVHR      L+PR     GGRG LE  +        T + R G +   EL+P
Sbjct:  138 GGLLELL-QGGGLVFPDARGAASAAMKHGEEKRAYQERRDRLLLLREQKEYQRMIDNIQRAPRETVRDIQASFKFQVGMGANMVVAVFTTFIISYWASKFIVGDNKSHRLVIGLVGAMFIMLVELLVFVTRSLKADEVLEDARRDAEESHTAVGVHR------LAPRPGEPMGGRGTLEQNR--------TSSSRRGREGEYELVP 328          
BLAST of mRNA_H-elongata_contig9276.16728.1 vs. uniprot
Match: D8LUD3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LUD3_ECTSI)

HSP 1 Score: 189 bits (479), Expect = 1.680e-57
Identity = 103/144 (71.53%), Postives = 121/144 (84.03%), Query Frame = 0
Query:   11 GGMLALLREGGGFVFPD-KPSNTPPLKQGEEKRNYEERRNRLLQLREQKDYARMTSNIQRAPRETVRDIQVSFRFQAGMGANMILAVLTAFIISYWASKFFIRDNISHRIVIGLVGAVFMMLVELLVFVMRSLKADRVVEDARK 153
            GG+L LL +GGG VFPD + + +  +K GEEKR Y+ERR+RLL LREQK+Y RM  NIQRAPRETVRDIQ SF+FQ GMGANM++AV T FIISYWASKF + DN SHR+VIGLVGA+F+MLVELLVFV RSLKAD V+EDAR+
Sbjct:   17 GGLLGLL-QGGGLVFPDARGAASAAMKHGEEKRAYQERRDRLLLLREQKEYQRMIDNIQRAPRETVRDIQASFKFQVGMGANMVVAVFTTFIISYWASKFIVGDNKSHRLVIGLVGAMFIMLVELLVFVTRSLKADEVLEDARR 159          
BLAST of mRNA_H-elongata_contig9276.16728.1 vs. uniprot
Match: A0A836CG91_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CG91_9STRA)

HSP 1 Score: 90.5 bits (223), Expect = 1.010e-18
Identity = 57/143 (39.86%), Postives = 89/143 (62.24%), Query Frame = 0
Query:   15 ALLREGGGFVFPDKPSNTPPLKQGEEKRNYEERRNRLLQLREQKDYARMTSNIQ--RAPRETVRDIQVSFRFQAGMGANMILAVLTAFIISYWASKFFIRDNISHRIVIGLVGAVFMMLVELLVFVMRSLKADRVVEDARKEA 155
            A L  GGG +FP+  +     K  + +  + +RR  L    E+++Y RMT++I+  R  R    DIQV+ +FQA +GANM+LA LT F + YW SK+F+  + +HR+  GLVGA  + +VE+LVFV+R+ +AD   + A + +
Sbjct:    7 AELLRGGGLIFPESVAAREATKHRDAQ--FAQRRQHLELAHEEREYERMTASIRGPRRDRHGPSDIQVTLKFQAAVGANMVLAGLTMFGLCYWVSKYFVSRD-AHRMAAGLVGAFAITVVEMLVFVIRASRADEARDYAARRS 146          
BLAST of mRNA_H-elongata_contig9276.16728.1 vs. uniprot
Match: A0A0P1A7H8_PLAHL (ATPase, vacuolar ER assembly factor, Vma12 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1A7H8_PLAHL)

HSP 1 Score: 66.6 bits (161), Expect = 1.030e-9
Identity = 46/145 (31.72%), Postives = 86/145 (59.31%), Query Frame = 0
Query:   13 MLALLREGGGF-VFPDKPSNTPPLKQGEEKRNY-EERRNRLLQLREQKDYARMTSNIQ-RAPRETVRDIQVSFRFQAGMGANMILAVLTAFIISYWASKFFIRDNISHRIVIGLVGAVFMMLVELLVFVMRSLKADRVVEDARKE 154
            +++ LR+G G  V  +        +  E+K  Y   RR +L +L E+  Y+ M  N++ R+  + +   Q + R    +GANM++A LTAFI  Y+ ++  +  N + R+V GLVGA+FMM++E+++F+ R+ K + +  +++K+
Sbjct:   70 LMSFLRQGRGVQVRVEAKEQLKDEQDNEKKTKYLASRRRKLQRLDEEMRYSSMVRNVKTRSVDKELLHHQTNIRQHLSIGANMVMARLTAFIAVYFLARN-LTQNETTRLVAGLVGAIFMMIIEMILFITRAAKIESIEHESKKQ 213          
BLAST of mRNA_H-elongata_contig9276.16728.1 vs. uniprot
Match: A0A6A3XLI2_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A6A3XLI2_9STRA)

HSP 1 Score: 65.9 bits (159), Expect = 2.040e-9
Identity = 50/148 (33.78%), Postives = 83/148 (56.08%), Query Frame = 0
Query:   13 MLALLREGGGF----VFPDKPSNTPPLKQGEEKRNY-EERRNRLLQLREQKDYARMTSNI--QRAPRETVRDIQVSFRFQAGMGANMILAVLTAFIISYWASKFFIRDNISHRIVIGLVGAVFMMLVELLVFVMRSLKADRVVEDARK 153
            + +LLR+  G     V P++  +       E++  Y   RR +LL+L E+  Y  M  N+  Q A RE     Q S R    +GANM++A +TAFI  Y+ ++  I ++ + R+V GL GA+ MM++E+++F+ R+ K + +  D RK
Sbjct:   70 LASLLRQSSGVQAHTVSPEQEEDXXXXXNKEKRAKYLARRREKLLRLDEEMRYGSMVRNVKTQTADRELASH-QTSVRQHLSIGANMVMARITAFIAVYFVARS-ITEHETTRLVAGLGGAIVMMVIEMVLFIARAAKIESIEHDQRK 215          
BLAST of mRNA_H-elongata_contig9276.16728.1 vs. uniprot
Match: A0A5D6XW23_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XW23_9STRA)

HSP 1 Score: 65.5 bits (158), Expect = 2.650e-9
Identity = 39/110 (35.45%), Postives = 69/110 (62.73%), Query Frame = 0
Query:   45 EERRNRLLQLREQKDYARMTSNIQ-RAPRETVRDIQVSFRFQAGMGANMILAVLTAFIISYWASKFFIRDNISHRIVIGLVGAVFMMLVELLVFVMRSLKADRVVEDARK 153
            E+RR +L +L E+  Y R+  N++ +     +   Q S R    +GANM++A +TAFI  Y  ++  + D+ + R+VIGLVGA+ MM++E+++F+ R+ K + +  D R+
Sbjct:  102 EQRRRKLRRLDEEMRYGRLVHNVKSKTQAAELEQFQTSTRQHLSIGANMVMARVTAFIALYMVARV-LTDSETMRVVIGLVGAIVMMVIEMVLFITRAAKYEVLERDQRR 210          
BLAST of mRNA_H-elongata_contig9276.16728.1 vs. uniprot
Match: A0A329SQ89_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329SQ89_9STRA)

HSP 1 Score: 63.2 bits (152), Expect = 1.800e-8
Identity = 47/144 (32.64%), Postives = 85/144 (59.03%), Query Frame = 0
Query:   13 MLALLREGGGFVFPDKPSNTPPLKQGEEKR--NYEERRNRLLQLREQKDYARMTSNIQRAPRET-VRDIQVSFRFQAGMGANMILAVLTAFIISYWASKFFIRDNISHRIVIGLVGAVFMMLVELLVFVMRSLKADRVVEDARK 153
            +++LLR+G G       +     ++ +EKR     +RR +LL+L E+  Y  M  N++    +T +   Q S R    +GANM++A +TAFI  Y+ ++  I +N + RIV GL GA+ MM++E+++F+ R+ K + + ++ +K
Sbjct:   69 LISLLRQGRGVQTRVIATYQEEDEEDKEKRIKYLAKRRQKLLRLDEEMRYGSMVRNVKTQSVDTELAHHQTSVRQHLSIGANMVMARVTAFIAVYFVARN-ITENETTRIVAGLGGAIVMMVIEMVLFIARAAKFESIEQEQKK 211          
BLAST of mRNA_H-elongata_contig9276.16728.1 vs. uniprot
Match: W2PG64_PHYPN (Uncharacterized protein n=8 Tax=Phytophthora TaxID=4783 RepID=W2PG64_PHYPN)

HSP 1 Score: 62.0 bits (149), Expect = 4.670e-8
Identity = 47/145 (32.41%), Postives = 83/145 (57.24%), Query Frame = 0
Query:   13 MLALLREGGGFVFPDKPSNTPPLKQGEEKRN--YEERRNRLLQLREQKDYARMTSNI--QRAPRETVRDIQVSFRFQAGMGANMILAVLTAFIISYWASKFFIRDNISHRIVIGLVGAVFMMLVELLVFVMRSLKADRVVEDARK 153
            +++LLR+G G       ++    ++  EKR      RR +LL+L E+  Y  M  N+  Q A +E     Q S R    +GANM++A +TAFI  Y+ ++  + +N + R+V GL GA+ MM++E+++F+ R+ K + +  + +K
Sbjct:   69 LVSLLRQGRGIQARVMATDQEETEEDREKRAKYLARRRQKLLRLDEEMRYDSMVRNVKTQSAAKELAHH-QTSVRQHLSIGANMVMARVTAFIAVYFLARN-LTENETTRLVAGLGGAIVMMVIEMVLFIARAAKFESIEHEHKK 211          
BLAST of mRNA_H-elongata_contig9276.16728.1 vs. uniprot
Match: D0MVW6_PHYIT (Uncharacterized protein n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0MVW6_PHYIT)

HSP 1 Score: 62.0 bits (149), Expect = 4.670e-8
Identity = 50/148 (33.78%), Postives = 85/148 (57.43%), Query Frame = 0
Query:   13 MLALLREGGGF----VFPDKPSNTPPLKQGEEKRNY-EERRNRLLQLREQKDYARMTSNI--QRAPRETVRDIQVSFRFQAGMGANMILAVLTAFIISYWASKFFIRDNISHRIVIGLVGAVFMMLVELLVFVMRSLKADRVVEDARK 153
            +++LLR+G G     V  ++  N    K  E++  Y  +RR +LL+L E+  Y  M  N+  Q A +E       S R    +GANM++A +TAFI  Y+ ++  + DN + RIV GL GA+ MM++E+++F+ R+ K + +  + +K
Sbjct:   69 LVSLLRQGRGVQARVVATEQEGNE---KDKEKRAKYLAKRRQKLLRLDEEMRYGSMVRNVKTQTAAKELTHH-NTSVRQHLSIGANMVIARVTAFIAVYFVARN-LTDNETTRIVAGLGGAIVMMVIEMVLFIARAAKFESIEHEQKK 211          
BLAST of mRNA_H-elongata_contig9276.16728.1 vs. uniprot
Match: A0A484E3R5_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E3R5_BRELC)

HSP 1 Score: 59.3 bits (142), Expect = 4.330e-7
Identity = 45/155 (29.03%), Postives = 88/155 (56.77%), Query Frame = 0
Query:   13 MLALLREGGG--------FVFPDKPSNTPPLKQGEEKRNYEERRNRLLQLREQKDYARMTSNI--QRAPRETVRDIQVSFRFQAGMGANMILAVLTAFIISYWASKFFIRDNISHRIVIGLVGAVFMMLVELLVFVMRSLKADRVVEDARKEAEL 157
            +++LLR+G G        +V+ ++ +      Q E  +   ERR +LL+L E+  Y+ M  N+  Q A +E    + +S R    +GANM++A +TAF+  Y+ ++  + +N + R++ GL GA+ MM++E+++F+ R+ K + +    +K   +
Sbjct:   70 LVSLLRQGQGTRARVVASYVYENEAA------QVERAKYLAERRRKLLRLDEEIRYSSMVRNVKPQSADKELAYHL-ISVRQHLSIGANMVMARITAFVAVYFVARN-LTENETTRLMFGLGGAIVMMMIEMVLFITRAAKFESIEIQRKKHKSI 216          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig9276.16728.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 18
Match NameE-valueIdentityDescription
A0A6H5KIJ2_9PHAE1.370e-6662.62Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LUD3_ECTSI1.680e-5771.53Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836CG91_9STRA1.010e-1839.86Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A0P1A7H8_PLAHL1.030e-931.72ATPase, vacuolar ER assembly factor, Vma12 n=1 Tax... [more]
A0A6A3XLI2_9STRA2.040e-933.78Uncharacterized protein n=2 Tax=Phytophthora TaxID... [more]
A0A5D6XW23_9STRA2.650e-935.45Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A329SQ89_9STRA1.800e-832.64Uncharacterized protein n=2 Tax=Phytophthora TaxID... [more]
W2PG64_PHYPN4.670e-832.41Uncharacterized protein n=8 Tax=Phytophthora TaxID... [more]
D0MVW6_PHYIT4.670e-833.78Uncharacterized protein n=2 Tax=Phytophthora infes... [more]
A0A484E3R5_BRELC4.330e-729.03Uncharacterized protein n=1 Tax=Bremia lactucae Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021013ATPase, vacuolar ER assembly factor, Vma12PFAMPF11712Vma12coord: 33..141
e-value: 2.4E-11
score: 43.9
IPR021013ATPase, vacuolar ER assembly factor, Vma12PANTHERPTHR31394FAMILY NOT NAMEDcoord: 19..156
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 108..118
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 139..235
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 86..107
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 119..138
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..85
NoneNo IPR availableTMHMMTMhelixcoord: 84..106
NoneNo IPR availableTMHMMTMhelixcoord: 116..138

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig9276contigH-elongata_contig9276:1948..4766 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig9276.16728.1mRNA_H-elongata_contig9276.16728.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig9276 1753..5543 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig9276.16728.1 ID=prot_H-elongata_contig9276.16728.1|Name=mRNA_H-elongata_contig9276.16728.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=236bp
MRRLMPPGDRGGMLALLREGGGFVFPDKPSNTPPLKQGEEKRNYEERRNR
LLQLREQKDYARMTSNIQRAPRETVRDIQVSFRFQAGMGANMILAVLTAF
IISYWASKFFIRDNISHRIVIGLVGAVFMMLVELLVFVMRSLKADRVVED
ARKEAELSHTAVGVHRSGFSPPLSPRVPRTGGRGLLEMKKDEDRGLDETV
ARRIGEDTVEELLPRTLGTRPDQDSDTGIGMIQRG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR021013ATPase_Vma12