prot_H-elongata_contig92006.16658.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig92006.16658.1
Unique Nameprot_H-elongata_contig92006.16658.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length152
Homology
BLAST of mRNA_H-elongata_contig92006.16658.1 vs. uniprot
Match: D7G282_ECTSI (3-isopropylmalate dehydrogenase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G282_ECTSI)

HSP 1 Score: 271 bits (694), Expect = 6.670e-88
Identity = 133/152 (87.50%), Postives = 141/152 (92.76%), Query Frame = 0
Query:    1 MCMVVDAKGSYDIMLLPGDGIGPEITVAAVEALEPLQSLFKMNFKEALIGGAAIDAEGSPWPESTMKQAKKSDSILLAAIGGPKWDTNPRELRPETGLLAMRKELGLFANLRPAKVMKELVDASTLKPEIVEGVDIMVVRELTGDVYFGTPK 152
            + MV +AK SYD+MLLPGDGIGPEIT A V ALEPLQSLFK+NFKEALIGGAAIDAEGSPWP+ST+  AK SDSILLAAIGGPKWD NPRELRPETGLLAMR +LGLFANLRPAKVMKELVDAS+LKPEIVEGVDIMVVRELTGDVYFGTPK
Sbjct:   42 LSMVTEAKDSYDVMLLPGDGIGPEITAATVNALEPLQSLFKLNFKEALIGGAAIDAEGSPWPDSTLALAKASDSILLAAIGGPKWDGNPRELRPETGLLAMRSQLGLFANLRPAKVMKELVDASSLKPEIVEGVDIMVVRELTGDVYFGTPK 193          
BLAST of mRNA_H-elongata_contig92006.16658.1 vs. uniprot
Match: A0A835ZK29_9STRA (3-isopropylmalate dehydrogenase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZK29_9STRA)

HSP 1 Score: 241 bits (614), Expect = 4.280e-76
Identity = 117/150 (78.00%), Postives = 130/150 (86.67%), Query Frame = 0
Query:    3 MVVDAKGSYDIMLLPGDGIGPEITVAAVEALEPLQSLFKMNFKEALIGGAAIDAEGSPWPESTMKQAKKSDSILLAAIGGPKWDTNPRELRPETGLLAMRKELGLFANLRPAKVMKELVDASTLKPEIVEGVDIMVVRELTGDVYFGTPK 152
            M V  K SY I LLPGDGIGPEIT A V A++P   LFKM FKEALIGGAAIDA GSP+P++T +Q K SDS+LL+AIGGPKWD NPRE RPETGLLAMRK LGLFANLRPAKV+++L+DASTLKPEIV+GVDIMVVRELTGDVYFGTPK
Sbjct:   40 MAVTKKDSYSITLLPGDGIGPEITTATVAAIQPFSKLFKMEFKEALIGGAAIDATGSPFPDATFEQIKASDSVLLSAIGGPKWDGNPREQRPETGLLAMRKGLGLFANLRPAKVVRQLLDASTLKPEIVDGVDIMVVRELTGDVYFGTPK 189          
BLAST of mRNA_H-elongata_contig92006.16658.1 vs. uniprot
Match: A0A6V1T6U9_HETAK (3-isopropylmalate dehydrogenase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1T6U9_HETAK)

HSP 1 Score: 223 bits (569), Expect = 2.410e-69
Identity = 111/151 (73.51%), Postives = 127/151 (84.11%), Query Frame = 0
Query:    3 MVVDAKGSYDIMLLPGDGIGPEITVAAVEALEPLQSL-FKMNFKEALIGGAAIDAEGSPWPESTMKQAKKSDSILLAAIGGPKWDTNPRELRPETGLLAMRKELGLFANLRPAKVMKELVDASTLKPEIVEGVDIMVVRELTGDVYFGTPK 152
            M V+ K SYDI LL GDGIGPEIT A V AL PL+ L FKMNFKEALIGGAA+DA   P+P+ +++Q K SDS+LL+ IGG KWD NPRELRPETGLL MRKE+GLFANLRPAKV+ +L+ ASTLK E++EGVDIMVVRELTGDVYFGTPK
Sbjct:   34 MAVEKKDSYDITLLTGDGIGPEITQATVAALAPLEKLGFKMNFKEALIGGAALDAVNHPFPDESLEQCKGSDSVLLSCIGGYKWDKNPRELRPETGLLRMRKEMGLFANLRPAKVIPQLMGASTLKEEVLEGVDIMVVRELTGDVYFGTPK 184          
BLAST of mRNA_H-elongata_contig92006.16658.1 vs. uniprot
Match: A0A7S0N7T0_9CRYP (3-isopropylmalate dehydrogenase n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0N7T0_9CRYP)

HSP 1 Score: 220 bits (560), Expect = 2.840e-68
Identity = 110/152 (72.37%), Postives = 123/152 (80.92%), Query Frame = 0
Query:    3 MVVDAKGSYDIMLLPGDGIGPEITVAAVEALEPLQSL--FKMNFKEALIGGAAIDAEGSPWPESTMKQAKKSDSILLAAIGGPKWDTNPRELRPETGLLAMRKELGLFANLRPAKVMKELVDASTLKPEIVEGVDIMVVRELTGDVYFGTPK 152
            M V  K SYD+ LLPGDGIGPEI  AAV A + + +   F +NFKEALIGGAA+DA   P P+ T+KQ K SDS+LLAAIGGPKWD NPRELRPETGLL MRK LGLFANLRPA V+ +L+DASTLKPE+V GVDIMVVRELTGDVYFG PK
Sbjct:   20 MAVSRKDSYDVTLLPGDGIGPEIIKAAVVACKAVAAKQGFTINFKEALIGGAALDAHNDPLPDVTLKQMKASDSVLLAAIGGPKWDKNPRELRPETGLLRMRKALGLFANLRPATVLPQLIDASTLKPEVVAGVDIMVVRELTGDVYFGEPK 171          
BLAST of mRNA_H-elongata_contig92006.16658.1 vs. uniprot
Match: A0A8J9S3R3_PHATR (Hypothetical protein (Fragment) n=1 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9S3R3_PHATR)

HSP 1 Score: 209 bits (533), Expect = 1.370e-66
Identity = 104/150 (69.33%), Postives = 122/150 (81.33%), Query Frame = 0
Query:    5 VDAKGSYDIMLLPGDGIGPEITVAAVEALEPL--QSLFKMNFKEALIGGAAIDAEGSPWPESTMKQAKKSDSILLAAIGGPKWDTNPRELRPETGLLAMRKELGLFANLRPAKVMKELVDASTLKPEIVEGVDIMVVRELTGDVYFGTPK 152
            V  K SYDI LLPGDGIGPEIT +  + L  L  +  F MN K ALIGGAAIDA   P+P+ +++Q + SDS+LLA IGG KWD+NPRELRPE+GLL MRKE+GLFANLRPAKV+ +L+DASTLK E+VEGVD+MVVRELTGDVYFGTPK
Sbjct:   41 VSKKDSYDITLLPGDGIGPEITESTKKVLTALCEKCGFDMNLKVALIGGAAIDAVNDPFPQESLEQCQASDSVLLACIGGYKWDSNPRELRPESGLLKMRKEMGLFANLRPAKVLPQLIDASTLKREVVEGVDVMVVRELTGDVYFGTPK 190          
BLAST of mRNA_H-elongata_contig92006.16658.1 vs. uniprot
Match: A0A7S2V595_9STRA (3-isopropylmalate dehydrogenase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V595_9STRA)

HSP 1 Score: 214 bits (546), Expect = 6.900e-66
Identity = 104/151 (68.87%), Postives = 124/151 (82.12%), Query Frame = 0
Query:    3 MVVDAKGSYDIMLLPGDGIGPEITVAAVEALEPLQSL-FKMNFKEALIGGAAIDAEGSPWPESTMKQAKKSDSILLAAIGGPKWDTNPRELRPETGLLAMRKELGLFANLRPAKVMKELVDASTLKPEIVEGVDIMVVRELTGDVYFGTPK 152
            M V  K SYD+ LL GDGIGPEIT AA+ A++PL+ + F MNFK+ALIGG AID    P+P+ ++KQ ++SDS+LLA IGG KWD NPR LRPETGLL MRKE+ LFANLRPAKV+ +L+ ASTLKPE++EGVDIMVVRELTGDVYFG PK
Sbjct:   25 MAVGKKASYDVTLLKGDGIGPEITDAAIVAMKPLEQMGFTMNFKDALIGGIAIDEVNDPFPDESLKQCQESDSVLLACIGGYKWDKNPRHLRPETGLLKMRKEMDLFANLRPAKVLPQLLGASTLKPEVLEGVDIMVVRELTGDVYFGQPK 175          
BLAST of mRNA_H-elongata_contig92006.16658.1 vs. uniprot
Match: A0A7S2P3R3_9STRA (3-isopropylmalate dehydrogenase n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2P3R3_9STRA)

HSP 1 Score: 214 bits (544), Expect = 9.520e-66
Identity = 104/147 (70.75%), Postives = 120/147 (81.63%), Query Frame = 0
Query:    8 KGSYDIMLLPGDGIGPEITVAAVEALEPLQSLF--KMNFKEALIGGAAIDAEGSPWPESTMKQAKKSDSILLAAIGGPKWDTNPRELRPETGLLAMRKELGLFANLRPAKVMKELVDASTLKPEIVEGVDIMVVRELTGDVYFGTPK 152
            K SYDI LLPGDGIGPEIT A  + L+ L   F  K+N KEALIGGAAIDA+  P+P+ +++Q    DS+LLA IGG KWD NPRELRPETGLL MRKE+GLFANLRPA V+ +L+DASTLK E+VEGVD+MVVRELTGDVYFGTPK
Sbjct:   17 KDSYDITLLPGDGIGPEITTATTKVLQTLTERFNFKLNLKEALIGGAAIDAKNDPFPDESLQQCLSGDSVLLACIGGYKWDNNPRELRPETGLLKMRKEMGLFANLRPAVVLDQLIDASTLKREVVEGVDVMVVRELTGDVYFGTPK 163          
BLAST of mRNA_H-elongata_contig92006.16658.1 vs. uniprot
Match: A0A7S0F2Y7_9CRYP (3-isopropylmalate dehydrogenase n=3 Tax=Geminigeraceae TaxID=589343 RepID=A0A7S0F2Y7_9CRYP)

HSP 1 Score: 213 bits (541), Expect = 4.200e-65
Identity = 105/154 (68.18%), Postives = 120/154 (77.92%), Query Frame = 0
Query:    1 MCMVVDAKGSYDIMLLPGDGIGPEITVAAVEALEPLQSL--FKMNFKEALIGGAAIDAEGSPWPESTMKQAKKSDSILLAAIGGPKWDTNPRELRPETGLLAMRKELGLFANLRPAKVMKELVDASTLKPEIVEGVDIMVVRELTGDVYFGTPK 152
            + M V  K SY +  LPGDGIGPEI  A V+  + + +   FKM FKEALIGGAA+DA   P+P+ T+KQ K SDS+LLAAIGGPKWD NPR+ RPETGLL MRK LGLFANLRPA V+ +L DASTLKPE+V GVDIMVVRELTGDVYFG PK
Sbjct:   47 LSMAVKKKDSYFVTTLPGDGIGPEIMAATVKVCQAVAAKQGFKMEFKEALIGGAALDACNDPFPDETLKQMKSSDSVLLAAIGGPKWDANPRDKRPETGLLKMRKSLGLFANLRPATVLPQLADASTLKPEVVSGVDIMVVRELTGDVYFGEPK 200          
BLAST of mRNA_H-elongata_contig92006.16658.1 vs. uniprot
Match: A0A6S8RM19_9STRA (3-isopropylmalate dehydrogenase n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6S8RM19_9STRA)

HSP 1 Score: 212 bits (540), Expect = 7.110e-65
Identity = 107/152 (70.39%), Postives = 120/152 (78.95%), Query Frame = 0
Query:    3 MVVDAKGSYDIMLLPGDGIGPEITVAAVEALEPL--QSLFKMNFKEALIGGAAIDAEGSPWPESTMKQAKKSDSILLAAIGGPKWDTNPRELRPETGLLAMRKELGLFANLRPAKVMKELVDASTLKPEIVEGVDIMVVRELTGDVYFGTPK 152
            M V    SY I LLPGDGIGPEIT A  E L  L  +  F M  KEALIGG AID +  P+PE T+KQ  +SDS+LLA IGG KWD+NPRELRPETGLL MRKE+GLFANLRPAKV+ +L+DASTLK E+VEGVD+MVVRELTGDVYFGTPK
Sbjct:   39 MAVPKSDSYSITLLPGDGIGPEITTATKEVLGALCKRCGFTMEMKEALIGGCAIDEKNDPFPEETLKQCLESDSVLLACIGGYKWDSNPRELRPETGLLKMRKEMGLFANLRPAKVIPQLLDASTLKREVVEGVDVMVVRELTGDVYFGTPK 190          
BLAST of mRNA_H-elongata_contig92006.16658.1 vs. uniprot
Match: A0A1Z5JD77_FISSO (3-isopropylmalate dehydrogenase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JD77_FISSO)

HSP 1 Score: 211 bits (536), Expect = 2.550e-64
Identity = 103/150 (68.67%), Postives = 123/150 (82.00%), Query Frame = 0
Query:    5 VDAKGSYDIMLLPGDGIGPEITVAAVEALEPLQSL--FKMNFKEALIGGAAIDAEGSPWPESTMKQAKKSDSILLAAIGGPKWDTNPRELRPETGLLAMRKELGLFANLRPAKVMKELVDASTLKPEIVEGVDIMVVRELTGDVYFGTPK 152
            V  K SY + LLPGDGIGPEIT A  + L+ L +   F++ +KEALIGGAAIDA+  P+P+ +++Q   SDS+LLA IGG KWD NPRELRPETGLL MRKE+GLFANLRPAKV+ +L+DASTLK E+VEGVD+MVVRELTGDVYFGTPK
Sbjct:   39 VAKKDSYAVTLLPGDGIGPEITAATKQVLQALATRCNFRIEWKEALIGGAAIDAKNDPFPQESLEQCLASDSVLLACIGGYKWDKNPRELRPETGLLKMRKEMGLFANLRPAKVLPQLIDASTLKREVVEGVDVMVVRELTGDVYFGTPK 188          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig92006.16658.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G282_ECTSI6.670e-8887.503-isopropylmalate dehydrogenase n=2 Tax=Ectocarpus... [more]
A0A835ZK29_9STRA4.280e-7678.003-isopropylmalate dehydrogenase n=1 Tax=Tribonema ... [more]
A0A6V1T6U9_HETAK2.410e-6973.513-isopropylmalate dehydrogenase n=1 Tax=Heterosigm... [more]
A0A7S0N7T0_9CRYP2.840e-6872.373-isopropylmalate dehydrogenase n=1 Tax=Cryptomona... [more]
A0A8J9S3R3_PHATR1.370e-6669.33Hypothetical protein (Fragment) n=1 Tax=Phaeodacty... [more]
A0A7S2V595_9STRA6.900e-6668.873-isopropylmalate dehydrogenase n=1 Tax=Fibrocapsa... [more]
A0A7S2P3R3_9STRA9.520e-6670.753-isopropylmalate dehydrogenase n=1 Tax=Leptocylin... [more]
A0A7S0F2Y7_9CRYP4.200e-6568.183-isopropylmalate dehydrogenase n=3 Tax=Geminigera... [more]
A0A6S8RM19_9STRA7.110e-6570.393-isopropylmalate dehydrogenase n=1 Tax=Ditylum br... [more]
A0A1Z5JD77_FISSO2.550e-6468.673-isopropylmalate dehydrogenase n=2 Tax=Fistulifer... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR024084Isopropylmalate dehydrogenase-like domainSMARTSM01329Iso_dh_2coord: 12..152
e-value: 4.4E-8
score: -98.8
IPR024084Isopropylmalate dehydrogenase-like domainPFAMPF00180Iso_dhcoord: 13..152
e-value: 6.3E-44
score: 150.5
NoneNo IPR availableGENE3D3.40.718.10coord: 4..152
e-value: 3.5E-48
score: 166.3
NoneNo IPR availablePANTHERPTHR42979:SF2coord: 9..152
NoneNo IPR availableSUPERFAMILY53659Isocitrate/Isopropylmalate dehydrogenase-likecoord: 12..150
IPR004429Isopropylmalate dehydrogenasePANTHERPTHR42979FAMILY NOT NAMEDcoord: 9..152

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig92006contigH-elongata_contig92006:146..2180 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig92006.16658.1mRNA_H-elongata_contig92006.16658.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig92006 146..2180 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig92006.16658.1 ID=prot_H-elongata_contig92006.16658.1|Name=mRNA_H-elongata_contig92006.16658.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=152bp
MCMVVDAKGSYDIMLLPGDGIGPEITVAAVEALEPLQSLFKMNFKEALIG
GAAIDAEGSPWPESTMKQAKKSDSILLAAIGGPKWDTNPRELRPETGLLA
MRKELGLFANLRPAKVMKELVDASTLKPEIVEGVDIMVVRELTGDVYFGT
PK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR024084IsoPropMal-DH-like_dom
IPR004429Isopropylmalate_DH