prot_H-elongata_contig92002.16656.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig92002.16656.1
Unique Nameprot_H-elongata_contig92002.16656.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length73
Homology
BLAST of mRNA_H-elongata_contig92002.16656.1 vs. uniprot
Match: A0A6H5KPS4_9PHAE (Glutathione peroxidase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KPS4_9PHAE)

HSP 1 Score: 89.4 bits (220), Expect = 1.330e-20
Identity = 41/66 (62.12%), Postives = 50/66 (75.76%), Query Frame = 0
Query:    1 MGKVDVNGHQSDPLFAWLKMASGIPVDIPWNFSKFLVICGD-VKRFSHDVSVMQLEHAIKNAPDSC 65
            M K+DVNG  S P+FAWLK ASG P DIPWNF+KFLV+CG  VKR+SH+V+ MQ++  I NA   C
Sbjct:  114 MSKIDVNGLHSSPIFAWLKAASGNPHDIPWNFTKFLVLCGSTVKRYSHEVNPMQMDDMITNARSFC 179          
BLAST of mRNA_H-elongata_contig92002.16656.1 vs. uniprot
Match: D8LS13_ECTSI (Glutathione peroxidase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LS13_ECTSI)

HSP 1 Score: 80.1 bits (196), Expect = 3.100e-17
Identity = 38/65 (58.46%), Postives = 51/65 (78.46%), Query Frame = 0
Query:    1 MGKVDVNGHQSDPLFAWLKMASGIPVDIPWNFSKFLVICGD-VKRFSHDVSVMQLEHAIKNAPDS 64
            MGKV+VNG +S PLFAWLK ASG+P +I WNF+KFLV+ G+ V R+SH+V+  Q+E  I +AP +
Sbjct:   99 MGKVEVNGLRSQPLFAWLKAASGVPGNIEWNFTKFLVVGGNHVTRYSHEVNPSQIEQDIISAPSA 163          
BLAST of mRNA_H-elongata_contig92002.16656.1 vs. uniprot
Match: A0A6C0G351_9BACL (Glutathione peroxidase n=2 Tax=Paenibacillus TaxID=44249 RepID=A0A6C0G351_9BACL)

HSP 1 Score: 52.4 bits (124), Expect = 1.380e-6
Identity = 32/63 (50.79%), Postives = 40/63 (63.49%), Query Frame = 0
Query:    1 MGKVDVNGHQSDPLFAWLK-MASG-IPVDIPWNFSKFLVICGD--VKRFSHDVSVMQLEHAIK 59
            +GK+DVNG  +DPL+A+LK  A G +   I WNF+KFLV      VKRFS     M+LE  IK
Sbjct:   92 LGKIDVNGPNADPLYAYLKRQAPGFLNSSIKWNFTKFLVDAEGRVVKRFSPTTKPMKLEGRIK 154          
BLAST of mRNA_H-elongata_contig92002.16656.1 vs. uniprot
Match: A0A067BKW7_SAPPC (Glutathione peroxidase n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067BKW7_SAPPC)

HSP 1 Score: 52.4 bits (124), Expect = 1.960e-6
Identity = 28/59 (47.46%), Postives = 37/59 (62.71%), Query Frame = 0
Query:    3 KVDVNGHQSDPLFAWLK--MASGIPVDIPWNFSKFLVICGD-VKRFSHDVSVMQLEHAI 58
            KVDVNGH +DP+FA+L   +A  I  D+ WNFSKFL+  G    R++   S   +E AI
Sbjct:  118 KVDVNGHDADPVFAYLTSVLAGSITNDVKWNFSKFLLAHGQPYARYAPTTSPASIEDAI 176          
BLAST of mRNA_H-elongata_contig92002.16656.1 vs. uniprot
Match: A0A835YHD0_9STRA (Glutathione peroxidase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YHD0_9STRA)

HSP 1 Score: 52.4 bits (124), Expect = 2.380e-6
Identity = 30/62 (48.39%), Postives = 38/62 (61.29%), Query Frame = 0
Query:    1 MGKVDVNGHQSDPLFAWLKMASGIPVDIPWNFSKFLVICG-DVKRFSHDVSVMQLEHAIKNA 61
            M KV+VNG   DPLF +LK A+G    + WNFSKFLV+ G   K +SH  S   +E  I +A
Sbjct:  121 MAKVEVNGDGEDPLFTFLKEATGSG-PLKWNFSKFLVVNGVPRKHYSHSTSPSAIEDDIVDA 181          
BLAST of mRNA_H-elongata_contig92002.16656.1 vs. uniprot
Match: W4RTA0_9BACI (Glutathione peroxidase n=7 Tax=Bacillaceae TaxID=186817 RepID=W4RTA0_9BACI)

HSP 1 Score: 51.6 bits (122), Expect = 2.600e-6
Identity = 29/62 (46.77%), Postives = 39/62 (62.90%), Query Frame = 0
Query:    3 KVDVNGHQSDPLFAWLKMASG--IPVDIPWNFSKFLVICGD--VKRFSHDVSVMQLEHAIKN 60
            K+DVNG Q+DPLFA+LK   G  +  DI WNF+KFLV      VKR++      ++E  I+N
Sbjct:   95 KIDVNGAQADPLFAFLKEQKGGLLTKDIKWNFTKFLVDRNGQVVKRYAPTTEPSKIEKDIEN 156          
BLAST of mRNA_H-elongata_contig92002.16656.1 vs. uniprot
Match: A0A2U2RPH1_9MICO (Glutathione peroxidase n=1 Tax=Brachybacterium endophyticum TaxID=2182385 RepID=A0A2U2RPH1_9MICO)

HSP 1 Score: 49.3 bits (116), Expect = 2.060e-5
Identity = 23/39 (58.97%), Postives = 29/39 (74.36%), Query Frame = 0
Query:    1 MGKVDVNGHQSDPLFAWLKMA-SGIP-VDIPWNFSKFLV 37
            +GK+DVNG  +DPLFAWL+   SG    DI WNF+KFL+
Sbjct:   93 LGKIDVNGQDADPLFAWLRSERSGTEGEDIEWNFAKFLI 131          
BLAST of mRNA_H-elongata_contig92002.16656.1 vs. uniprot
Match: A0A7W0XX40_9ACTN (Glutathione peroxidase n=1 Tax=Propionibacteriaceae bacterium TaxID=2021380 RepID=A0A7W0XX40_9ACTN)

HSP 1 Score: 48.5 bits (114), Expect = 3.980e-5
Identity = 32/63 (50.79%), Postives = 39/63 (61.90%), Query Frame = 0
Query:    3 KVDVNGHQSDPLFAWLKMA-SGIPVD-IPWNFSKFLVICGDVKRFSHDVSVMQLEHAIKNAPD 63
            K+DVNG Q+ PLFAWL+   SGI  D I WNF+KFLV          D SV++  +A K APD
Sbjct:   95 KIDVNGDQAHPLFAWLREEKSGILGDAIKWNFTKFLV--------GRDGSVIK-RYAPKTAPD 148          
BLAST of mRNA_H-elongata_contig92002.16656.1 vs. uniprot
Match: A0A7W5B0N0_9BACL (Glutathione peroxidase n=1 Tax=Paenibacillus phyllosphaerae TaxID=274593 RepID=A0A7W5B0N0_9BACL)

HSP 1 Score: 48.5 bits (114), Expect = 4.190e-5
Identity = 30/62 (48.39%), Postives = 36/62 (58.06%), Query Frame = 0
Query:    1 MGKVDVNGHQSDPLFAWLKMASG--IPVDIPWNFSKFLVICGD--VKRFSHDVSVMQLEHAI 58
            MGKVDVNG  +DPLF +LK  +G      I WNF+KFLV      VKRFS   +  + E  I
Sbjct:   92 MGKVDVNGPSTDPLFQYLKKETGGLFGSGIKWNFTKFLVNREGKVVKRFSPTTAPKKFEDEI 153          
BLAST of mRNA_H-elongata_contig92002.16656.1 vs. uniprot
Match: UPI00160177EF (glutathione peroxidase n=1 Tax=Nocardioides stalactiti TaxID=2755356 RepID=UPI00160177EF)

HSP 1 Score: 47.8 bits (112), Expect = 7.800e-5
Identity = 23/38 (60.53%), Postives = 26/38 (68.42%), Query Frame = 0
Query:    2 GKVDVNGHQSDPLFAWLKMASG--IPVDIPWNFSKFLV 37
            GKVDVNG  + PLFAWLK   G  +   I WNF+KFLV
Sbjct:   94 GKVDVNGDDAHPLFAWLKSEKGGLLGGGIKWNFTKFLV 131          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig92002.16656.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
A0A6H5KPS4_9PHAE1.330e-2062.12Glutathione peroxidase n=2 Tax=Ectocarpus TaxID=28... [more]
D8LS13_ECTSI3.100e-1758.46Glutathione peroxidase n=2 Tax=Ectocarpus TaxID=28... [more]
A0A6C0G351_9BACL1.380e-650.79Glutathione peroxidase n=2 Tax=Paenibacillus TaxID... [more]
A0A067BKW7_SAPPC1.960e-647.46Glutathione peroxidase n=2 Tax=Saprolegnia TaxID=4... [more]
A0A835YHD0_9STRA2.380e-648.39Glutathione peroxidase n=1 Tax=Tribonema minus Tax... [more]
W4RTA0_9BACI2.600e-646.77Glutathione peroxidase n=7 Tax=Bacillaceae TaxID=1... [more]
A0A2U2RPH1_9MICO2.060e-558.97Glutathione peroxidase n=1 Tax=Brachybacterium end... [more]
A0A7W0XX40_9ACTN3.980e-550.79Glutathione peroxidase n=1 Tax=Propionibacteriacea... [more]
A0A7W5B0N0_9BACL4.190e-548.39Glutathione peroxidase n=1 Tax=Paenibacillus phyll... [more]
UPI00160177EF7.800e-560.53glutathione peroxidase n=1 Tax=Nocardioides stalac... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.30.10coord: 1..64
e-value: 2.4E-12
score: 48.5
IPR000889Glutathione peroxidasePROSITEPS51355GLUTATHIONE_PEROXID_3coord: 1..72
score: 14.83
IPR036249Thioredoxin-like superfamilySUPERFAMILY52833Thioredoxin-likecoord: 1..59

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig92002contigH-elongata_contig92002:908..1753 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig92002.16656.1mRNA_H-elongata_contig92002.16656.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig92002 701..2219 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig92002.16656.1 ID=prot_H-elongata_contig92002.16656.1|Name=mRNA_H-elongata_contig92002.16656.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=73bp
MGKVDVNGHQSDPLFAWLKMASGIPVDIPWNFSKFLVICGDVKRFSHDVS
VMQLEHAIKNAPDSCPDLTGEL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000889Glutathione_peroxidase
IPR036249Thioredoxin-like_sf