prot_H-elongata_contig9117.16587.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig9117.16587.1
Unique Nameprot_H-elongata_contig9117.16587.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length85
Homology
BLAST of mRNA_H-elongata_contig9117.16587.1 vs. uniprot
Match: D7G173_ECTSI (Bardet-Biedl syndrome 5 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G173_ECTSI)

HSP 1 Score: 137 bits (345), Expect = 1.290e-37
Identity = 68/82 (82.93%), Postives = 76/82 (92.68%), Query Frame = 0
Query:    1 GSLVVTNLRVLWVAHKLKRVNLSIGFGTMSNISIRKAKSQLRGSTQALCITSKFQQSHFEFVFTSLVRNSPRLFTTVQAVLR 82
            GSLVVTNLRVLW++HK+ RVNLSIGF T+ NISIRKA+S+LRG TQALCITSK+ QS FEFVFTSLV+NSPRLFTTVQAVLR
Sbjct:   51 GSLVVTNLRVLWISHKISRVNLSIGFSTVLNISIRKARSRLRGITQALCITSKYNQSRFEFVFTSLVKNSPRLFTTVQAVLR 132          
BLAST of mRNA_H-elongata_contig9117.16587.1 vs. uniprot
Match: A0A835YZA3_9STRA (Bardet-Biedl syndrome 5 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZA3_9STRA)

HSP 1 Score: 124 bits (312), Expect = 9.600e-33
Identity = 60/82 (73.17%), Postives = 72/82 (87.80%), Query Frame = 0
Query:    1 GSLVVTNLRVLWVAHKLKRVNLSIGFGTMSNISIRKAKSQLRGSTQALCITSKFQQSHFEFVFTSLVRNSPRLFTTVQAVLR 82
            GSL+VTNLR+LWV+HK  +VNLSIG  T+  I+IRKA+S+LRG+TQALC  +KFQ S FEF+FTSLVRNSPR+FTTVQAVLR
Sbjct:   49 GSLIVTNLRILWVSHKNSKVNLSIGLETVQTINIRKARSKLRGTTQALCALTKFQSSKFEFIFTSLVRNSPRMFTTVQAVLR 130          
BLAST of mRNA_H-elongata_contig9117.16587.1 vs. uniprot
Match: A0A7S1XSS1_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XSS1_9STRA)

HSP 1 Score: 124 bits (312), Expect = 2.790e-32
Identity = 59/82 (71.95%), Postives = 73/82 (89.02%), Query Frame = 0
Query:    1 GSLVVTNLRVLWVAHKLKRVNLSIGFGTMSNISIRKAKSQLRGSTQALCITSKFQQSHFEFVFTSLVRNSPRLFTTVQAVLR 82
            GSL+VTNLRV+WV+HK  +VNLS+GFG + NISIR+AKS+LRG+TQAL + +K+  S FEF+FTSLV+NSPRLFTTVQAVLR
Sbjct:  110 GSLMVTNLRVMWVSHKSSKVNLSVGFGAVQNISIRRAKSRLRGTTQALFVMTKYNNSRFEFIFTSLVKNSPRLFTTVQAVLR 191          
BLAST of mRNA_H-elongata_contig9117.16587.1 vs. uniprot
Match: F0YFS0_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YFS0_AURAN)

HSP 1 Score: 119 bits (298), Expect = 1.620e-30
Identity = 59/82 (71.95%), Postives = 72/82 (87.80%), Query Frame = 0
Query:    1 GSLVVTNLRVLWVAHKLKRVNLSIGFGTMSNISIRKAKSQLRGSTQALCITSKFQQSHFEFVFTSLVRNSPRLFTTVQAVLR 82
            GSLVVTNLR++W++HK  R NLSIGF T+ +I+IRKAKS+LRG+TQAL I +KF  S FEF+FTSLV++SPRLFTTVQAVLR
Sbjct:   65 GSLVVTNLRIMWISHKNSRTNLSIGFNTVVSINIRKAKSKLRGATQALYIMTKFGGSRFEFIFTSLVQHSPRLFTTVQAVLR 146          
BLAST of mRNA_H-elongata_contig9117.16587.1 vs. uniprot
Match: A0A482SWL4_9ARCH (Bardet-Biedl syndrome 5 protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SWL4_9ARCH)

HSP 1 Score: 110 bits (274), Expect = 1.460e-29
Identity = 50/82 (60.98%), Postives = 70/82 (85.37%), Query Frame = 0
Query:    1 GSLVVTNLRVLWVAHKLKRVNLSIGFGTMSNISIRKAKSQLRGSTQALCITSKFQQSHFEFVFTSLVRNSPRLFTTVQAVLR 82
            GSL++TNLR++W++H+  R+NLSIG  T+ + +I+ AKS+LRGSTQALC+  KF  + FEF+FTSLV+NSPR+FTT+Q+VLR
Sbjct:   26 GSLIITNLRIVWISHENTRINLSIGLSTVVSANIKTAKSKLRGSTQALCVLGKFN-TRFEFIFTSLVKNSPRMFTTIQSVLR 106          
BLAST of mRNA_H-elongata_contig9117.16587.1 vs. uniprot
Match: A0A7S4INJ5_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A7S4INJ5_9EUKA)

HSP 1 Score: 108 bits (270), Expect = 3.400e-28
Identity = 52/82 (63.41%), Postives = 67/82 (81.71%), Query Frame = 0
Query:    1 GSLVVTNLRVLWVAHKLKRVNLSIGFGTMSNISIRKAKSQLRGSTQALCITSKFQQSHFEFVFTSLVRNSPRLFTTVQAVLR 82
            GSL +TNLR++W+ H+  RVNLSIG+  +++I+IR A S+LRG+TQAL + +KF  S FEFVFT+LVR SPRLFTTVQAV R
Sbjct:   53 GSLSITNLRLIWICHRNVRVNLSIGYNAVASINIRTANSRLRGNTQALYVMTKFNNSRFEFVFTNLVRQSPRLFTTVQAVYR 134          
BLAST of mRNA_H-elongata_contig9117.16587.1 vs. uniprot
Match: A0A7S1JC20_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1JC20_9EUGL)

HSP 1 Score: 107 bits (268), Expect = 2.750e-26
Identity = 52/82 (63.41%), Postives = 66/82 (80.49%), Query Frame = 0
Query:    1 GSLVVTNLRVLWVAHKLKRVNLSIGFGTMSNISIRKAKSQLRGSTQALCITSKFQQSHFEFVFTSLVRNSPRLFTTVQAVLR 82
            GSLV+TNLR++W A K  R+NLSIG+  + +I+I KA S+LRG TQAL + +KF  S FEF+FT+LV+NSPRLFTTVQAV R
Sbjct:   48 GSLVITNLRMVWTAQKSPRINLSIGYSCIVSITIHKANSRLRGQTQALYVLTKFNSSRFEFIFTNLVKNSPRLFTTVQAVHR 129          
BLAST of mRNA_H-elongata_contig9117.16587.1 vs. uniprot
Match: A0A7S3MAN9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MAN9_9STRA)

HSP 1 Score: 101 bits (252), Expect = 6.780e-26
Identity = 47/82 (57.32%), Postives = 66/82 (80.49%), Query Frame = 0
Query:    1 GSLVVTNLRVLWVAHKLKRVNLSIGFGTMSNISIRKAKSQLRGSTQALCITSKFQQSHFEFVFTSLVRNSPRLFTTVQAVLR 82
            G L+VTNLR++W + K  R NLSIGFG +S+++I++  S+LRG++QAL   ++F  + FEF+FTSLV+NSPRLFTTVQAV +
Sbjct:   12 GILIVTNLRLIWTSAKSARTNLSIGFGCISSVNIKQVNSKLRGNSQALFAMTRFNATRFEFIFTSLVKNSPRLFTTVQAVFK 93          
BLAST of mRNA_H-elongata_contig9117.16587.1 vs. uniprot
Match: A0A813IXH9_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813IXH9_POLGL)

HSP 1 Score: 102 bits (255), Expect = 1.880e-25
Identity = 47/82 (57.32%), Postives = 66/82 (80.49%), Query Frame = 0
Query:    1 GSLVVTNLRVLWVAHKLKRVNLSIGFGTMSNISIRKAKSQLRGSTQALCITSKFQQSHFEFVFTSLVRNSPRLFTTVQAVLR 82
            G L+VTNLR++W + K  R NLSIGF  +S+++IR+  S+LRG++QAL + ++F  + FEF+FT+LV+NSPRLFTTVQAV R
Sbjct:   50 GILIVTNLRLIWTSAKSARTNLSIGFNNVSSVNIRQVNSKLRGNSQALFVMTRFNSTRFEFIFTNLVKNSPRLFTTVQAVFR 131          
BLAST of mRNA_H-elongata_contig9117.16587.1 vs. uniprot
Match: A0A485LA64_9STRA (Aste57867_17753 protein n=9 Tax=Aphanomyces TaxID=100860 RepID=A0A485LA64_9STRA)

HSP 1 Score: 105 bits (262), Expect = 2.320e-25
Identity = 51/82 (62.20%), Postives = 64/82 (78.05%), Query Frame = 0
Query:    1 GSLVVTNLRVLWVAHKLKRVNLSIGFGTMSNISIRKAKSQLRGSTQALCITSKFQQSHFEFVFTSLVRNSPRLFTTVQAVLR 82
            GSL +TNLR+LW +H+  R NLSIG+  + ++ IR A S+LRGSTQAL I +K+  S FEF+FTSLV+ SPRLFTTVQAV R
Sbjct:   56 GSLEITNLRLLWASHRSARTNLSIGYNCVQSVKIRTATSKLRGSTQALYIMTKYSNSRFEFIFTSLVKASPRLFTTVQAVFR 137          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig9117.16587.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G173_ECTSI1.290e-3782.93Bardet-Biedl syndrome 5 n=1 Tax=Ectocarpus silicul... [more]
A0A835YZA3_9STRA9.600e-3373.17Bardet-Biedl syndrome 5 n=1 Tax=Tribonema minus Ta... [more]
A0A7S1XSS1_9STRA2.790e-3271.95Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
F0YFS0_AURAN1.620e-3071.95Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A482SWL4_9ARCH1.460e-2960.98Bardet-Biedl syndrome 5 protein n=1 Tax=archaeon T... [more]
A0A7S4INJ5_9EUKA3.400e-2863.41Hypothetical protein (Fragment) n=1 Tax=Prymnesium... [more]
A0A7S1JC20_9EUGL2.750e-2663.41Hypothetical protein n=1 Tax=Eutreptiella gymnasti... [more]
A0A7S3MAN9_9STRA6.780e-2657.32Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
A0A813IXH9_POLGL1.880e-2557.32Hypothetical protein n=1 Tax=Polarella glacialis T... [more]
A0A485LA64_9STRA2.320e-2562.20Aste57867_17753 protein n=9 Tax=Aphanomyces TaxID=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014003DM16 repeatSMARTSM00683dm16coord: 1..35
e-value: 4.9E-5
score: 23.0
IPR006606Bardet-Biedl syndrome 5 proteinPFAMPF07289BBL5coord: 1..82
e-value: 4.7E-28
score: 98.2
IPR006606Bardet-Biedl syndrome 5 proteinPANTHERPTHR21351BARDET-BIEDL SYNDROME PROTEIN 5coord: 1..82

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig9117contigH-elongata_contig9117:312..1005 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig9117.16587.1mRNA_H-elongata_contig9117.16587.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig9117 312..1005 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig9117.16587.1 ID=prot_H-elongata_contig9117.16587.1|Name=mRNA_H-elongata_contig9117.16587.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=85bp
GSLVVTNLRVLWVAHKLKRVNLSIGFGTMSNISIRKAKSQLRGSTQALCI
TSKFQQSHFEFVFTSLVRNSPRLFTTVQAVLRQA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014003DM16_repeat
IPR006606BBL5