prot_H-elongata_contig90756.16559.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig90756.16559.1
Unique Nameprot_H-elongata_contig90756.16559.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length45
Homology
BLAST of mRNA_H-elongata_contig90756.16559.1 vs. uniprot
Match: D7FMQ9_ECTSI (Aquarius intron-binding protein similar to aquarius n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FMQ9_ECTSI)

HSP 1 Score: 79.0 bits (193), Expect = 5.380e-16
Identity = 34/45 (75.56%), Postives = 39/45 (86.67%), Query Frame = 0
Query:    1 MPPWLHDVFLGYGDPASANYRSMPEQQVLNDVDFGDTLLDVDHVR 45
            MPPWLHDVFLGYGDPA A+YR++P+Q V   VDFGDTLLD+DH R
Sbjct: 1301 MPPWLHDVFLGYGDPAGAHYRNLPDQ-VTEGVDFGDTLLDIDHAR 1344          
BLAST of mRNA_H-elongata_contig90756.16559.1 vs. uniprot
Match: A0A5J4XJ11_9CHLO (Embryo defective protein n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4XJ11_9CHLO)

HSP 1 Score: 69.3 bits (168), Expect = 1.320e-12
Identity = 28/45 (62.22%), Postives = 33/45 (73.33%), Query Frame = 0
Query:    1 MPPWLHDVFLGYGDPASANYRSMPEQQVLNDVDFGDTLLDVDHVR 45
            MP WLHD+FLGYGDPA A Y +MP  Q+L  +DF DT LD  HV+
Sbjct:  653 MPDWLHDIFLGYGDPAQAKYTNMPADQLLQTIDFKDTFLDAAHVK 697          
BLAST of mRNA_H-elongata_contig90756.16559.1 vs. uniprot
Match: A0A699ZJ50_HAELA (Uncharacterized protein (Fragment) n=1 Tax=Haematococcus lacustris TaxID=44745 RepID=A0A699ZJ50_HAELA)

HSP 1 Score: 68.9 bits (167), Expect = 1.740e-12
Identity = 26/44 (59.09%), Postives = 36/44 (81.82%), Query Frame = 0
Query:    1 MPPWLHDVFLGYGDPASANYRSMPEQQVLNDVDFGDTLLDVDHV 44
            +PPWLHD+FLGYGDP +A +R +P++Q+L+ VDF DT L+  HV
Sbjct:  292 IPPWLHDIFLGYGDPGAAQWRQLPQEQLLHTVDFKDTFLNAQHV 335          
BLAST of mRNA_H-elongata_contig90756.16559.1 vs. uniprot
Match: R1EKH5_EMIHU (Uncharacterized protein (Fragment) n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1EKH5_EMIHU)

HSP 1 Score: 67.4 bits (163), Expect = 6.190e-12
Identity = 29/44 (65.91%), Postives = 33/44 (75.00%), Query Frame = 0
Query:    2 PPWLHDVFLGYGDPASANYRSMPEQQVLNDVDFGDTLLDVDHVR 45
            PPWLHDV LGYGDPA+A Y S+P  Q +   DF DT LD+DHVR
Sbjct:   83 PPWLHDVLLGYGDPAAAAYWSLPADQRVTKHDFADTFLDLDHVR 126          
BLAST of mRNA_H-elongata_contig90756.16559.1 vs. uniprot
Match: A0A7S4BJB1_CHRCT (Hypothetical protein (Fragment) n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4BJB1_CHRCT)

HSP 1 Score: 67.4 bits (163), Expect = 6.290e-12
Identity = 27/45 (60.00%), Postives = 36/45 (80.00%), Query Frame = 0
Query:    1 MPPWLHDVFLGYGDPASANYRSMPEQQVLNDVDFGDTLLDVDHVR 45
            +P WLHDV LGYGDPA+A+Y ++P +Q +N+ DF DT LD+ HVR
Sbjct:  387 VPEWLHDVLLGYGDPAAASYSNLPPEQRVNEYDFFDTFLDLQHVR 431          
BLAST of mRNA_H-elongata_contig90756.16559.1 vs. uniprot
Match: A0A6R5I3G4_AEDAE (Uncharacterized protein n=4 Tax=Stegomyia TaxID=53541 RepID=A0A6R5I3G4_AEDAE)

HSP 1 Score: 66.2 bits (160), Expect = 1.600e-11
Identity = 27/45 (60.00%), Postives = 35/45 (77.78%), Query Frame = 0
Query:    1 MPPWLHDVFLGYGDPASANYRSMPEQQVLNDVDFGDTLLDVDHVR 45
            +PPWLHD+ LGYGDP +A+Y  MP+Q  +  +DF DT LD+DHVR
Sbjct:  692 VPPWLHDILLGYGDPGAAHYSRMPDQARV--LDFNDTFLDIDHVR 734          
BLAST of mRNA_H-elongata_contig90756.16559.1 vs. uniprot
Match: A0A5B8MXC7_9CHLO (Intron-binding protein aquarius n=1 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MXC7_9CHLO)

HSP 1 Score: 66.2 bits (160), Expect = 1.600e-11
Identity = 28/44 (63.64%), Postives = 36/44 (81.82%), Query Frame = 0
Query:    1 MPPWLHDVFLGYGDPASANYRSMPEQQVLNDVDFGDTLLDVDHV 44
            +P WLHDVFLGYGDPAS++  SMPE Q++ ++DF DT LD DH+
Sbjct:  722 LPNWLHDVFLGYGDPASSHCTSMPEDQIM-EIDFRDTFLDADHL 764          
BLAST of mRNA_H-elongata_contig90756.16559.1 vs. uniprot
Match: B0W925_CULQU (Intron-binding protein aquarius n=1 Tax=Culex quinquefasciatus TaxID=7176 RepID=B0W925_CULQU)

HSP 1 Score: 66.2 bits (160), Expect = 1.600e-11
Identity = 27/45 (60.00%), Postives = 35/45 (77.78%), Query Frame = 0
Query:    1 MPPWLHDVFLGYGDPASANYRSMPEQQVLNDVDFGDTLLDVDHVR 45
            +PPWLHD+ LGYGDP +A+Y  MP+Q  +  +DF DT LD+DHVR
Sbjct:  380 VPPWLHDILLGYGDPGAAHYSRMPDQARV--MDFNDTFLDIDHVR 422          
BLAST of mRNA_H-elongata_contig90756.16559.1 vs. uniprot
Match: UPI001953950B (RNA helicase aquarius n=1 Tax=Culex pipiens pallens TaxID=42434 RepID=UPI001953950B)

HSP 1 Score: 66.2 bits (160), Expect = 1.600e-11
Identity = 27/45 (60.00%), Postives = 35/45 (77.78%), Query Frame = 0
Query:    1 MPPWLHDVFLGYGDPASANYRSMPEQQVLNDVDFGDTLLDVDHVR 45
            +PPWLHD+ LGYGDP +A+Y  MP+Q  +  +DF DT LD+DHVR
Sbjct:  381 VPPWLHDILLGYGDPGAAHYSRMPDQARV--MDFNDTFLDIDHVR 423          
BLAST of mRNA_H-elongata_contig90756.16559.1 vs. uniprot
Match: A0A7S0CRJ2_MICPS (Hypothetical protein n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0CRJ2_MICPS)

HSP 1 Score: 65.5 bits (158), Expect = 2.990e-11
Identity = 28/45 (62.22%), Postives = 34/45 (75.56%), Query Frame = 0
Query:    1 MPPWLHDVFLGYGDPASANYRSMPEQQVLNDVDFGDTLLDVDHVR 45
            +P WLHDVFLGYGDPA+A   +MP +Q L  VDF DT LD +H+R
Sbjct:  598 VPDWLHDVFLGYGDPAAAQGANMPREQRLATVDFKDTFLDAEHLR 642          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig90756.16559.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FMQ9_ECTSI5.380e-1675.56Aquarius intron-binding protein similar to aquariu... [more]
A0A5J4XJ11_9CHLO1.320e-1262.22Embryo defective protein n=1 Tax=Trebouxia sp. A1-... [more]
A0A699ZJ50_HAELA1.740e-1259.09Uncharacterized protein (Fragment) n=1 Tax=Haemato... [more]
R1EKH5_EMIHU6.190e-1265.91Uncharacterized protein (Fragment) n=1 Tax=Emilian... [more]
A0A7S4BJB1_CHRCT6.290e-1260.00Hypothetical protein (Fragment) n=1 Tax=Chrysotila... [more]
A0A6R5I3G4_AEDAE1.600e-1160.00Uncharacterized protein n=4 Tax=Stegomyia TaxID=53... [more]
A0A5B8MXC7_9CHLO1.600e-1163.64Intron-binding protein aquarius n=1 Tax=Chloropico... [more]
B0W925_CULQU1.600e-1160.00Intron-binding protein aquarius n=1 Tax=Culex quin... [more]
UPI001953950B1.600e-1160.00RNA helicase aquarius n=1 Tax=Culex pipiens pallen... [more]
A0A7S0CRJ2_MICPS2.990e-1162.22Hypothetical protein n=1 Tax=Micromonas pusilla Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032174Intron-binding protein aquarius, N-terminalPFAMPF16399Aquarius_Ncoord: 1..44
e-value: 4.9E-17
score: 61.3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig90756contigH-elongata_contig90756:2230..2364 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig90756.16559.1mRNA_H-elongata_contig90756.16559.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig90756 2230..2367 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig90756.16559.1 ID=prot_H-elongata_contig90756.16559.1|Name=mRNA_H-elongata_contig90756.16559.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=45bp
MPPWLHDVFLGYGDPASANYRSMPEQQVLNDVDFGDTLLDVDHVR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032174Aquarius_N