prot_H-elongata_contig90649.16545.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig90649.16545.1
Unique Nameprot_H-elongata_contig90649.16545.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length211
Homology
BLAST of mRNA_H-elongata_contig90649.16545.1 vs. uniprot
Match: A0A6H5K541_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K541_9PHAE)

HSP 1 Score: 195 bits (496), Expect = 7.380e-59
Identity = 99/204 (48.53%), Postives = 132/204 (64.71%), Query Frame = 0
Query:    8 LDDGGLEVVESRRGVQQGCNLGPLCYSAGSLKILNELKDNPPVPGARAVSFIDDITVILPPELSHDMAAIGNVTEWLQKRLGVEGISLNRRKSQALLAYGVGPEQLTEEKRVALDTTGLTVVRQGMRVVGVPVGTEQFQRDFVQKAVNGEPAELVRVLVPMEDAQASFQILRLSATSRLSYLLRTVPPSIICKAAANYDALVEW 211
            ++DG +E+V S+RGVQQGCNLG   +S G L  + E  D PPVPGA+ + ++DD+ V LPP L+ ++ AI  VT W+Q  L  +GI L+  KS+ L   G     LT +++  L  TGL+V   GM +VGVPVGTE FQR FV     G PAEL+R L  ++D QAS+Q+LRLS   RL +LLRT+ PSI   AA  +D L+ W
Sbjct:    1 MEDGSIEIVRSQRGVQQGCNLGGFGFSVGLLDTMKEFNDKPPVPGAKLIGYVDDLQVHLPPGLARNIQAIATVTNWIQDHLLQKGIELSLPKSKVLFPEGFFFSSLTNDEQRDLTKTGLSVAEGGMAIVGVPVGTECFQRSFVTNFARGNPAELIRRLSTLDDPQASYQLLRLSGVPRLFHLLRTIAPSITNTAAREHDNLMIW 204          
BLAST of mRNA_H-elongata_contig90649.16545.1 vs. uniprot
Match: A0A6H5JCM0_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCM0_9PHAE)

HSP 1 Score: 205 bits (521), Expect = 6.670e-58
Identity = 101/209 (48.33%), Postives = 139/209 (66.51%), Query Frame = 0
Query:    3 KLLFALDDGGLEVVESRRGVQQGCNLGPLCYSAGSLKILNELKDNPPVPGARAVSFIDDITVILPPELSHDMAAIGNVTEWLQKRLGVEGISLNRRKSQALLAYGVGPEQLTEEKRVALDTTGLTVVRQGMRVVGVPVGTEQFQRDFVQKAVNGEPAELVRVLVPMEDAQASFQILRLSATSRLSYLLRTVPPSIICKAAANYDALVEW 211
            KLLF ++DG +EVV S+RGVQQGCNLG   +  G L I+ E  + PPVPG + + ++DD+   LPP L+ +M AI  VT W+Q+RL  +GI L+  KS+ L   G+    LT +++  L   GL+V   GM VVG+PVGTE+FQR+FV K   G+PAEL+  L  ++D QAS+Q+LRLS   RL +LLRT+ PSI   AA  +D ++ W
Sbjct:  297 KLLFKMEDGSIEVVLSQRGVQQGCNLGGFGFCVGLLDIMKEFNNKPPVPGVKLIGYVDDLQAHLPPGLARNMQAISTVTNWIQERLSQKGIELSLPKSKVLFPEGLCMSSLTNDEQQQLTKIGLSVTEGGMPVVGIPVGTEEFQRNFVSKIARGDPAELILRLATLDDPQASYQLLRLSGVPRLFHLLRTIAPSITNSAAKIHDNMMMW 505          
BLAST of mRNA_H-elongata_contig90649.16545.1 vs. uniprot
Match: A0A6H5KGJ4_9PHAE (Reverse transcriptase domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGJ4_9PHAE)

HSP 1 Score: 201 bits (510), Expect = 1.550e-57
Identity = 103/209 (49.28%), Postives = 137/209 (65.55%), Query Frame = 0
Query:    3 KLLFALDDGGLEVVESRRGVQQGCNLGPLCYSAGSLKILNELKDNPPVPGARAVSFIDDITVILPPELSHDMAAIGNVTEWLQKRLGVEGISLNRRKSQALLAYGVGPEQLTEEKRVALDTTGLTVVRQGMRVVGVPVGTEQFQRDFVQKAVNGEPAELVRVLVPMEDAQASFQILRLSATSRLSYLLRTVPPSIICKAAANYDALVEW 211
            KLLF ++DG +EVV S+RGVQQGCNLG   +  G L I+ E  + PPVPGA+ + ++DD+ V LPP L+ ++ AI  VT W+Q  L  +GI L+  KS+ L   G+    LT +++  L  TGL+V   GM +VGVPVGTE FQR FV     G PAEL+R L  ++D QAS+Q+LRLS   RL +LLRT+ PSI   AA  +D L+ W
Sbjct:  297 KLLFKMEDGSIEVVLSQRGVQQGCNLGGFGFCVGLLDIMKEFNNKPPVPGAKLIGYVDDLQVHLPPGLARNIQAIATVTNWIQDHLLQKGIELSLPKSKVLFPEGLFFSSLTNDEQRDLTKTGLSVAEGGMAIVGVPVGTECFQRSFVTNFARGNPAELIRRLSTLDDPQASYQLLRLSGVPRLFHLLRTIAPSITNTAAREHDNLMIW 505          
BLAST of mRNA_H-elongata_contig90649.16545.1 vs. uniprot
Match: A0A6H5LN63_9PHAE (Reverse transcriptase domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LN63_9PHAE)

HSP 1 Score: 205 bits (521), Expect = 2.040e-57
Identity = 101/209 (48.33%), Postives = 139/209 (66.51%), Query Frame = 0
Query:    3 KLLFALDDGGLEVVESRRGVQQGCNLGPLCYSAGSLKILNELKDNPPVPGARAVSFIDDITVILPPELSHDMAAIGNVTEWLQKRLGVEGISLNRRKSQALLAYGVGPEQLTEEKRVALDTTGLTVVRQGMRVVGVPVGTEQFQRDFVQKAVNGEPAELVRVLVPMEDAQASFQILRLSATSRLSYLLRTVPPSIICKAAANYDALVEW 211
            KLLF ++DG +EVV S+RGVQQGCNLG   +  G L I+ E  + PPVPG + + ++DD+   LPP L+ +M AI  VT W+Q+RL  +GI L+  KS+ L   G+    LT +++  L   GL+V   GM VVG+PVGTE+FQR+FV K   G+PAEL+  L  ++D QAS+Q+LRLS   RL +LLRT+ PSI   AA  +D ++ W
Sbjct:  297 KLLFKMEDGSIEVVLSQRGVQQGCNLGGFGFCVGLLDIMKEFNNKPPVPGVKLIGYVDDLQAHLPPGLARNMQAISTVTNWIQERLSQKGIELSLPKSKVLFPEGLCMSSLTNDEQQQLTKIGLSVAEGGMPVVGIPVGTEEFQRNFVSKIARGDPAELILRLATLDDPQASYQLLRLSGVPRLFHLLRTIAPSITNSAAKIHDNMMMW 505          
BLAST of mRNA_H-elongata_contig90649.16545.1 vs. uniprot
Match: A0A6H5K1H0_9PHAE (Reverse transcriptase domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1H0_9PHAE)

HSP 1 Score: 205 bits (521), Expect = 2.320e-57
Identity = 101/209 (48.33%), Postives = 139/209 (66.51%), Query Frame = 0
Query:    3 KLLFALDDGGLEVVESRRGVQQGCNLGPLCYSAGSLKILNELKDNPPVPGARAVSFIDDITVILPPELSHDMAAIGNVTEWLQKRLGVEGISLNRRKSQALLAYGVGPEQLTEEKRVALDTTGLTVVRQGMRVVGVPVGTEQFQRDFVQKAVNGEPAELVRVLVPMEDAQASFQILRLSATSRLSYLLRTVPPSIICKAAANYDALVEW 211
            KLLF ++DG +EVV S+RGVQQGCNLG   +  G L I+ E  + PPVPG + + ++DD+   LPP L+ +M AI  VT W+Q+RL  +GI L+  KS+ L   G+    LT +++  L   GL+V   GM VVG+PVGTE+FQR+FV K   G+PAEL+  L  ++D QAS+Q+LRLS   RL +LLRT+ PSI   AA  +D ++ W
Sbjct:  145 KLLFKMEDGSIEVVLSQRGVQQGCNLGGFGFCVGLLDIMKEFNNKPPVPGVKLIGYVDDLQAHLPPGLARNMQAISTVTNWIQERLSQKGIELSLPKSKVLFPEGLCMSSLTNDEQQQLTKIGLSVAEGGMPVVGIPVGTEEFQRNFVSKIARGDPAELILRLATLDDPQASYQLLRLSGVPRLFHLLRTIAPSITNSAAKIHDNMMMW 353          
BLAST of mRNA_H-elongata_contig90649.16545.1 vs. uniprot
Match: A0A6H5KSY9_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSY9_9PHAE)

HSP 1 Score: 195 bits (496), Expect = 1.830e-56
Identity = 100/209 (47.85%), Postives = 135/209 (64.59%), Query Frame = 0
Query:    3 KLLFALDDGGLEVVESRRGVQQGCNLGPLCYSAGSLKILNELKDNPPVPGARAVSFIDDITVILPPELSHDMAAIGNVTEWLQKRLGVEGISLNRRKSQALLAYGVGPEQLTEEKRVALDTTGLTVVRQGMRVVGVPVGTEQFQRDFVQKAVNGEPAELVRVLVPMEDAQASFQILRLSATSRLSYLLRTVPPSIICKAAANYDALVEW 211
            KLLF ++DG +EVV S+RGVQQGCNLG   +  G L I+ E  + PPVPGA+ + ++DD+ V LPP L+ ++ AI  VT W+Q  L  +GI L+  KS  L   G+    LT +++  L  TGL+V   GM +VGVPVGTE FQR FV     G PAEL+  L  ++D Q S+Q+LR+S   RL +LLRT+ PSI   AA  +D+L+ W
Sbjct:  145 KLLFKMEDGSIEVVLSQRGVQQGCNLGGFGFCVGLLDIMKEFNNKPPVPGAKLIGYVDDLQVHLPPGLARNIQAIATVTNWIQDHLLQKGIELSLPKSNVLFPEGLFFSSLTNDEQRDLTKTGLSVAEGGMAIVGVPVGTECFQRSFVTNFARGIPAELIPRLSTLDDPQTSYQLLRMSGVPRLFHLLRTIAPSITNTAAREHDSLMIW 353          
BLAST of mRNA_H-elongata_contig90649.16545.1 vs. uniprot
Match: A0A6P0N5L4_9CYAN (Patatin-like protein n=1 Tax=Moorena sp. SIO3C2 TaxID=2607842 RepID=A0A6P0N5L4_9CYAN)

HSP 1 Score: 189 bits (481), Expect = 5.970e-52
Identity = 97/210 (46.19%), Postives = 136/210 (64.76%), Query Frame = 0
Query:    1 PPKLLFALDDGGLEVVESRRGVQQGCNLGPLCYSAGSLKILNELKDNPPVPGARAVSFIDDITVILPPELSHDMAAIGNVTEWLQKRLGVEGISLNRRKSQALLAYGVGPEQLTEEKRVALDTTGLTVVRQGMRVVGVPVGTEQFQRDFVQKAVNGEPAELVRVLVPMEDAQASFQILRLSATSRLSYLLRTVPPSIICKAAANYDALVE 210
            PPKLL+  D G + V+ S  GVQQGCNLGPLCYSAG LK+L + + NPPV GA+ ++FIDD+ V+LP   + + AA   VT W+Q  +   G++LNR KS+ L   G   +   E+ R  L+ T L V   GMR+VGVPVG   + +        GEP +L++ +  ++DAQAS QILR SA +RL++LLR++PP +  +AA+ +D  VE
Sbjct: 1331 PPKLLYKTDSG-MAVIPSATGVQQGCNLGPLCYSAGLLKLLRDFRANPPVVGAQLMAFIDDLVVLLPKNHACNPAAAEAVTTWIQANMQPLGVALNRSKSKILFPPGTDVKSWPEKDRETLERTQLAVAEGGMRIVGVPVGEPDYIKRSALDIARGEPTDLLKEIASLDDAQASLQILRFSAATRLNFLLRSLPPDLTKEAASEFDKSVE 1539          
BLAST of mRNA_H-elongata_contig90649.16545.1 vs. uniprot
Match: A0A6H5JLD7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLD7_9PHAE)

HSP 1 Score: 158 bits (400), Expect = 3.550e-44
Identity = 77/171 (45.03%), Postives = 110/171 (64.33%), Query Frame = 0
Query:   41 LNELKDNPPVPGARAVSFIDDITVILPPELSHDMAAIGNVTEWLQKRLGVEGISLNRRKSQALLAYGVGPEQLTEEKRVALDTTGLTVVRQGMRVVGVPVGTEQFQRDFVQKAVNGEPAELVRVLVPMEDAQASFQILRLSATSRLSYLLRTVPPSIICKAAANYDALVEW 211
            + E  + PPVPG + + ++DD+   LPP L+ +M AI  VT W+Q+RL  +GI L+  KS+ L   G+    LT +++  L   GL+V   GM VVG+P GTE+FQR+FV K   G+PAEL+  L  ++D QAS+Q+LRLS   RL +LLRT+ PSI   AA  +D ++ W
Sbjct:    1 MKEFNNKPPVPGVKLIGYVDDLQAHLPPGLARNMQAISTVTNWIQERLSQKGIELSLPKSKVLFPEGLCMSSLTNDEQQQLTKIGLSVAEGGMPVVGIPAGTEEFQRNFVSKIARGDPAELILRLATLDDPQASYQLLRLSGVPRLFHLLRTIAPSITNSAAKIHDNMMMW 171          
BLAST of mRNA_H-elongata_contig90649.16545.1 vs. uniprot
Match: A0A6H5JL76_9PHAE (Uncharacterized protein n=5 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL76_9PHAE)

HSP 1 Score: 152 bits (385), Expect = 7.880e-42
Identity = 80/171 (46.78%), Postives = 107/171 (62.57%), Query Frame = 0
Query:   41 LNELKDNPPVPGARAVSFIDDITVILPPELSHDMAAIGNVTEWLQKRLGVEGISLNRRKSQALLAYGVGPEQLTEEKRVALDTTGLTVVRQGMRVVGVPVGTEQFQRDFVQKAVNGEPAELVRVLVPMEDAQASFQILRLSATSRLSYLLRTVPPSIICKAAANYDALVEW 211
            + E  D PPVPGA+ + ++DD+ V LPP L+ ++ AI  VT W+Q  L  + I L+  KS+ L   G+    LT +++  L  TGL+V   GM +VGVPVGTE FQR FV     G PAEL+R L  ++D QAS+Q+LRLS   RL +LLRT  PSI   AA  +D L+ W
Sbjct:    1 MKEFNDKPPVPGAKLIRYVDDLHVHLPPGLARNIQAIATVTNWIQDHLLRKVIELSLPKSKVLFPEGLFFSSLTNDEQRDLTKTGLSVAEGGMAIVGVPVGTECFQRSFVTNFARGNPAELIRRLSTLDDPQASYQLLRLSGVPRLFHLLRTTAPSITSTAAREHDNLMIW 171          
BLAST of mRNA_H-elongata_contig90649.16545.1 vs. uniprot
Match: A0A6H5KKJ7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKJ7_9PHAE)

HSP 1 Score: 159 bits (401), Expect = 2.580e-41
Identity = 78/171 (45.61%), Postives = 110/171 (64.33%), Query Frame = 0
Query:   41 LNELKDNPPVPGARAVSFIDDITVILPPELSHDMAAIGNVTEWLQKRLGVEGISLNRRKSQALLAYGVGPEQLTEEKRVALDTTGLTVVRQGMRVVGVPVGTEQFQRDFVQKAVNGEPAELVRVLVPMEDAQASFQILRLSATSRLSYLLRTVPPSIICKAAANYDALVEW 211
            + E  + PPVPG + + ++DD+   LPP L+ +M AI  VT W+Q+RL  +GI L+  KS+ L   G+    LT +++  L   GL+V   GM VVG+PVGTE+FQR+FV K   G+PAEL+  L  ++D QAS+Q+LRLS   RL  LLRT+ PSI   AA  +D ++ W
Sbjct:    1 MKEFNNKPPVPGVKLIGYVDDLQAHLPPGLARNMQAISTVTNWIQERLSQKGIELSLPKSKVLFPEGLCMSSLTNDEQQQLTKIGLSVAEGGMPVVGIPVGTEEFQRNFVSKIARGDPAELILRLATLDDPQASYQLLRLSGVPRLFQLLRTIAPSITNSAAKIHDNMMMW 171          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig90649.16545.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K541_9PHAE7.380e-5948.53Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JCM0_9PHAE6.670e-5848.33Reverse transcriptase domain-containing protein (F... [more]
A0A6H5KGJ4_9PHAE1.550e-5749.28Reverse transcriptase domain-containing protein n=... [more]
A0A6H5LN63_9PHAE2.040e-5748.33Reverse transcriptase domain-containing protein n=... [more]
A0A6H5K1H0_9PHAE2.320e-5748.33Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KSY9_9PHAE1.830e-5647.85Reverse transcriptase domain-containing protein (F... [more]
A0A6P0N5L4_9CYAN5.970e-5246.19Patatin-like protein n=1 Tax=Moorena sp. SIO3C2 Ta... [more]
A0A6H5JLD7_9PHAE3.550e-4445.03Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JL76_9PHAE7.880e-4246.78Uncharacterized protein n=5 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KKJ7_9PHAE2.580e-4145.61Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000477Reverse transcriptase domainPFAMPF00078RVT_1coord: 14..116
e-value: 6.6E-8
score: 32.3
IPR000477Reverse transcriptase domainPROSITEPS50878RT_POLcoord: 1..128
score: 11.54

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig90649contigH-elongata_contig90649:225..857 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig90649.16545.1mRNA_H-elongata_contig90649.16545.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig90649 225..857 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig90649.16545.1 ID=prot_H-elongata_contig90649.16545.1|Name=mRNA_H-elongata_contig90649.16545.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=211bp
PPKLLFALDDGGLEVVESRRGVQQGCNLGPLCYSAGSLKILNELKDNPPV
PGARAVSFIDDITVILPPELSHDMAAIGNVTEWLQKRLGVEGISLNRRKS
QALLAYGVGPEQLTEEKRVALDTTGLTVVRQGMRVVGVPVGTEQFQRDFV
QKAVNGEPAELVRVLVPMEDAQASFQILRLSATSRLSYLLRTVPPSIICK
AAANYDALVEW
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000477RT_dom