prot_H-elongata_contig9017.16504.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig9017.16504.1
Unique Nameprot_H-elongata_contig9017.16504.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length544
Homology
BLAST of mRNA_H-elongata_contig9017.16504.1 vs. uniprot
Match: D7G8E4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8E4_ECTSI)

HSP 1 Score: 306 bits (784), Expect = 5.680e-93
Identity = 223/563 (39.61%), Postives = 287/563 (50.98%), Query Frame = 0
Query:   19 RAERVWMRTGKWSEDDRELAEREIAGAILERQQTLVEGYVRERRRYLNRRVSAQREGYGTFQNSWIADESWGGGHIRRRNITEADKAAFREAVSRTKIVLKLLEVKI----LPPASCS---SSPGTISTVPSKKWKEQDRINY-ASLDKRDPTRRRSVFLRANSRAVGLKTFIGRGAHENDKDEKRSVYKVLRKSTEAYSDRVETYGGGATR--CRRVVGGGNNLVPWDIVYKGVVSVEAARMNTAALAVQIAFRRRMFHRFVWAQGYLRRPMHAFAIFKRVSRPLLEGGNLDVTAVASGQRMDITPGDKGAADVGGGGEDWSKINSLDTWPEASGFCPSAPFHTHAVDVAFLEYRRWCHQASTVVPEARASTSAENEVTVV------LDISSTLQVAPPPRPRG-----------SPLFERKYAIRTEAMRSTLLALHLPFMSGGIDAAIEDLSRTILTEAL----------------VGSGIKRVTSFNGVTCKSRTDTNSGVERAKIQSNRTRSIMQCRQGISFVKWYEWWVRHLPYDPCSATCLLKTIQCAKTLHAAEI 538
            RA+    R GKW+++DR+LAE E+AG I++ QQ  VEGYV+ERRRYL+RRVSAQR+G+G FQ   +     G G    +   EA KA F EAV+RTK+VLKLLE K     LP  S     ++ GT   V      +   +    S  +RDP  + S     N R +  K  +      +DK E   + KVLR +TEAYSDRV   GGGATR    R  G G        V +G    E ARM+ AA  VQ+AFR+RMFHRFVWAQ YLR P HA+ +FKR   P+  GG                      ADV       + +N +D WPE  GFCPS P H HA D  FL Y R C   S  +  + A+T+ + E T           S+   V+ P RP             +  FERKY IRT A+R   + L +PF+ G +DAA+EDL +TI  ++                 V SG++  +   G    S   T  G  R     +  R        +SF KWY WW+RHLP+DP S  CLLKT++CAK LHA+EI
Sbjct:   94 RAKMARKRVGKWNDEDRDLAELEMAGLIIQEQQEFVEGYVQERRRYLSRRVSAQRDGHGGFQREEVPT---GPGGRWSKKAMEAKKAEFSEAVNRTKVVLKLLEAKTAASSLPQPSGGDGDAAGGTAGAVGRNPSGDSPGVRGDGSHRRRDP--QHSPPKANNDRRIKSKACVS-----DDKRETWDMKKVLRTATEAYSDRVGKQGGGATRINANRQSGAGCGATA---VGRGG---ERARMSAAAQTVQVAFRQRMFHRFVWAQAYLRGPTHAYEVFKRCL-PMPRGGXXXXXXXXXXXXXXXXLRPAALADVAS-----AAVNLVDAWPELPGFCPSFPHHVHAADPIFLRYLRSCTPKSYDISFSSATTTTQEEGTETGKTPPTASASTGAGVSSPGRPXXXXXXXXXNQEFAEAFERKYHIRTAAVRGMYVDLRVPFLPGALDAALEDLEQTIARDSAPPVEGGAKNRRRQVDTVSSGVRLASPLRG----SGGGTAGGKGRVGQNPHGGR--------LSFAKWYPWWIRHLPFDPASTGCLLKTVRCAKALHASEI 622          
BLAST of mRNA_H-elongata_contig9017.16504.1 vs. uniprot
Match: A0A6H5L1Z0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1Z0_9PHAE)

HSP 1 Score: 223 bits (568), Expect = 5.610e-63
Identity = 177/481 (36.80%), Postives = 228/481 (47.40%), Query Frame = 0
Query:  102 ADKAAFREAVSRTKIVLKLLEVKI----LPPAS------CSSSPGTISTVPSKKWKEQDRINYASLDKRDPTRRRSVFLRANSRAVGLKTFIGRGAHENDKDEKRSVYKVLRKSTEAYSDRVETYGGGATR--CRRVVGGGNNLVPWDIVYKGVVSVEAARMNTAALAVQIAFRRRMFHRFVWAQGYLRRPMHAFAIFKRVSRPLLEGGNLDVTAVASGQRMDITPG------------DKGAADVGGGGEDWSKINSLDTWPEASGFCPSAPFHTHAVDVAFLEYRRWCHQASTVVPEARASTSAENEVTV-----VLDISSTLQVAPPPRP-------RGSP----LFERKYAIRTEAMRSTLLALHLPFMSGGIDAAIEDLSRTILTEA---LVGSGIKRVTSFNGVTCKSRTDTNSGVERAKIQSNRTRSIMQCRQG-ISFVKWYEWWVRHLPYDPCSATCLLKTIQCAKTLHAAEI 538
            ++ AA  EAV+RTK+VLKLLE K     LP  S         + G +   PS          + S  +RDP    S     N R    K  +      +DK E   + KVLR +TEAYSDRV   GGGATR    R  G G        V  G    E ARM+ AA  VQ+AFR+RMFHRFVWAQ YLR P HA+ +FKR   P+  G                                   ADV       + +N +D WPE  GFCPS P H H+ D  FL Y R C + S+ +  + A+T+AE              S+   V+ P RP       + +P     FERKY IRT A+    + L +PF+ G +DAA+EDL + I  +    L G G  R  + + V+   R  +  G     I   + R       G +SF KWY WW+RHLP+DP S  CLLKT++CAK LHA+EI
Sbjct:    4 SEDAASLEAVNRTKVVLKLLEAKAASSNLPLPSGGNGDAAGGTAGAVGRNPS--GNSPGARGHRSRRRRDP--HHSPPEAINDRRTKNKASVS-----DDKRETWDMKKVLRTATEAYSDRVGQQGGGATRINANRKPGAGCGATA---VGTGG---ERARMSAAAQTVQVAFRQRMFHRFVWAQAYLRGPTHAYEVFKRCL-PMPRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXPLQSTALADVAS-----AAVNLVDAWPELPGFCPSFPHHVHSADPIFLRYLRSCTRESSGISFSSATTTAEEGAATGRAPPTASASTGAGVSSPGRPPQQTQQQQHNPEFGEAFERKYNIRTAAVHGMYVDLRVPFLPGALDAALEDLEQIIARDGAPPLEGGGKNRRCNVDTVSNGVRLASPLGGSGGGIAVGKGRVTQNPHGGRLSFAKWYPWWIRHLPFDPASTGCLLKTVRCAKALHASEI 463          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig9017.16504.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G8E4_ECTSI5.680e-9339.61Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L1Z0_9PHAE5.610e-6336.80Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig9017contigH-elongata_contig9017:3738..5948 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig9017.16504.1mRNA_H-elongata_contig9017.16504.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig9017 3738..5948 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig9017.16504.1 ID=prot_H-elongata_contig9017.16504.1|Name=mRNA_H-elongata_contig9017.16504.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=544bp
SREASSSRANGEKAGPPYRAERVWMRTGKWSEDDRELAEREIAGAILERQ
QTLVEGYVRERRRYLNRRVSAQREGYGTFQNSWIADESWGGGHIRRRNIT
EADKAAFREAVSRTKIVLKLLEVKILPPASCSSSPGTISTVPSKKWKEQD
RINYASLDKRDPTRRRSVFLRANSRAVGLKTFIGRGAHENDKDEKRSVYK
VLRKSTEAYSDRVETYGGGATRCRRVVGGGNNLVPWDIVYKGVVSVEAAR
MNTAALAVQIAFRRRMFHRFVWAQGYLRRPMHAFAIFKRVSRPLLEGGNL
DVTAVASGQRMDITPGDKGAADVGGGGEDWSKINSLDTWPEASGFCPSAP
FHTHAVDVAFLEYRRWCHQASTVVPEARASTSAENEVTVVLDISSTLQVA
PPPRPRGSPLFERKYAIRTEAMRSTLLALHLPFMSGGIDAAIEDLSRTIL
TEALVGSGIKRVTSFNGVTCKSRTDTNSGVERAKIQSNRTRSIMQCRQGI
SFVKWYEWWVRHLPYDPCSATCLLKTIQCAKTLHAAEIEAVIG*
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