prot_H-elongata_contig89643.16462.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig89643.16462.1
Unique Nameprot_H-elongata_contig89643.16462.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length126
Homology
BLAST of mRNA_H-elongata_contig89643.16462.1 vs. uniprot
Match: D8LSR1_ECTSI (ANAPC4_WD40 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LSR1_ECTSI)

HSP 1 Score: 142 bits (358), Expect = 2.490e-39
Identity = 66/79 (83.54%), Postives = 72/79 (91.14%), Query Frame = 0
Query:    1 ELAPVHSLEGHRLGVLSIRAFNKGKEAVTSSLDSCMRFWDLESGELTAAEEPGPVEAWTLDVSKDDRLLAGGTQKGSIN 79
            ELAPVHSL GHRLGVLS+RAFN GKEAV+SS+DSC+RFWDLESGE TA EEPGPVEAWTL VS DD+LLA GTQKGS+N
Sbjct:   42 ELAPVHSLNGHRLGVLSVRAFNHGKEAVSSSIDSCIRFWDLESGEQTAVEEPGPVEAWTLAVSTDDKLLASGTQKGSVN 120          
BLAST of mRNA_H-elongata_contig89643.16462.1 vs. uniprot
Match: A0A7S2B7M3_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2B7M3_9STRA)

HSP 1 Score: 118 bits (296), Expect = 6.240e-30
Identity = 59/123 (47.97%), Postives = 82/123 (66.67%), Query Frame = 0
Query:    7 SLEGHRLGVLSIRAFNKGKEAVTSSLDSCMRFWDLESGELTAAEEPGPVEAWTLDVSKDDRLLAGGTQKGSINLWALDGHKKARSLSH-TRDKFVMSVAFSP--DGKWVASGGLDGLVNIFDV 126
            S EGHRLGV+S+    +G     SS+DS +RFWDLE+GE +A+ + G +EAW+L +S  D+ LA G Q+G++N+W  +  KK  SL+H +R  FVMSVAFSP  D   VA    DG + ++DV
Sbjct:   61 SFEGHRLGVVSVAVNTEGTWCACSSIDSVIRFWDLETGETSASIDEGALEAWSLALSPHDKFLATGAQRGAVNIWDAEAKKKMASLTHGSRGSFVMSVAFSPLVDQLQVAGSSKDGSIAVYDV 183          
BLAST of mRNA_H-elongata_contig89643.16462.1 vs. uniprot
Match: A0A4U1EMH1_MONMO (Uncharacterized protein n=1 Tax=Monodon monoceros TaxID=40151 RepID=A0A4U1EMH1_MONMO)

HSP 1 Score: 112 bits (280), Expect = 2.560e-27
Identity = 59/144 (40.97%), Postives = 87/144 (60.42%), Query Frame = 0
Query:    7 SLEGHRLGVLSIRAFNKGKEAVTSSLDSCMRFWDLESGELTAAEEPGPVEAWTLDVSKDDRLLAGGTQKGSINLWALDGHKKARSLSHTRDKFVMSVAF------------------------SPDGKWVASGGLDGLVNIFDV 126
            SLEGH+LGV+S+   +    A +SSLD+ +R WDLE+G+   + + GPV+AWTL  S D + LA GT  G +N++ ++  KK  SL  TR KF++S+A+                        SPDGK++ASG +DG++NIFD+
Sbjct:  108 SLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLD-TRGKFILSIAYVRKRCSFFLSLILSVYSSSPLYSLSPDGKYLASGAIDGIINIFDI 250          
BLAST of mRNA_H-elongata_contig89643.16462.1 vs. uniprot
Match: A0A2C9JG02_BIOGL (Uncharacterized protein n=1 Tax=Biomphalaria glabrata TaxID=6526 RepID=A0A2C9JG02_BIOGL)

HSP 1 Score: 106 bits (265), Expect = 1.300e-25
Identity = 56/134 (41.79%), Postives = 80/134 (59.70%), Query Frame = 0
Query:    6 HSLEGHRLGVLSIRAFNKGKEAVTSSLDSCMRFWDLESGELTAAEEPGPVEAWTLDVSKDDRLLAGGTQKG-----SINLWALDGHKKARSLSHTRDKFVMSV--------AFSPDGKWVASGGLDGLVNIFDV 126
            H+LEGH+LGV+S+   + G  A +SSLDS +R WDLESG++  + + GPV+AWT+  S D R LA G+  G       ++W+    K  R  S +      S+          SPDGK++ASG LDG+VN+FD+
Sbjct:   21 HTLEGHQLGVVSVDINSDGSLAASSSLDSHVRIWDLESGKMAKSIDAGPVDAWTIAFSPDSRFLASGSHTGCKITHEDSIWSCAFGKNERDPSGSETIVTGSIDDYVKVWKCQSPDGKFIASGALDGIVNVFDI 154          
BLAST of mRNA_H-elongata_contig89643.16462.1 vs. uniprot
Match: A0A3S3QAI8_9ACAR (WD repeat-containing protein 61-like protein n=1 Tax=Dinothrombium tinctorium TaxID=1965070 RepID=A0A3S3QAI8_9ACAR)

HSP 1 Score: 103 bits (257), Expect = 3.620e-24
Identity = 54/118 (45.76%), Postives = 77/118 (65.25%), Query Frame = 0
Query:    9 EGHRLGVLSIRAFNKGKEAVTSSLDSCMRFWDLESGELTAAEEPGPVEAWTLDVSKDDRLLAGGTQKGSINLWALDGHKKARSLSHTRDKFVMSVAFSPDGKWVASGGLDGLVNIFDV 126
            EGH LGV+S+   ++G  A +SSLDS +RFWDL SG    + + GPV+AWT+  S D +L+A G+  G INL+  +   +   L  T+ KF +++AF  +GK VASG  DG++ IFDV
Sbjct:   74 EGHALGVVSVDINSEGTIAASSSLDSHIRFWDLNSGTQVQSIDAGPVDAWTVCFSPDSKLIATGSYSGKINLYNTETGTREAQLD-TKGKFPLTIAFV-NGKSVASGATDGMIKIFDV 189          
BLAST of mRNA_H-elongata_contig89643.16462.1 vs. uniprot
Match: A0A836CKX9_9STRA (WD40-repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKX9_9STRA)

HSP 1 Score: 100 bits (249), Expect = 3.670e-23
Identity = 46/77 (59.74%), Postives = 61/77 (79.22%), Query Frame = 0
Query:    2 LAPVHSLEGHRLGVLSIRAFNKGKEAVTSSLDSCMRFWDLESGELTAAEEPGPVEAWTLDVSKDDRLLAGGTQKGSI 78
            L+P H L GHRLGV+SI+A  +G  AVTSS+DSC+RFWDLESG  T   + GPVEAW++D+S + +LLA GTQ+G++
Sbjct:   43 LSPGHVLGGHRLGVVSIKADAEGSVAVTSSVDSCLRFWDLESGTKTNTIDAGPVEAWSVDMSPNGKLLAAGTQQGAV 119          
BLAST of mRNA_H-elongata_contig89643.16462.1 vs. uniprot
Match: A0A6P7GLA6_DIAVI (WD repeat-containing protein 61 n=1 Tax=Diabrotica virgifera virgifera TaxID=50390 RepID=A0A6P7GLA6_DIAVI)

HSP 1 Score: 99.8 bits (247), Expect = 8.780e-23
Identity = 50/121 (41.32%), Postives = 71/121 (58.68%), Query Frame = 0
Query:    6 HSLEGHRLGVLSIRAFNKGKEAVTSSLDSCMRFWDLESGELTAAEEPGPVEAWTLDVSKDDRLLAGGTQKGSINLWALDGHKKARSLSHTRDKFVMSVAFSPDGKWVASGGLDGLVNIFDV 126
            H+LEGH LGV+S+   + GK   +SSLDS MR WDLE GE  A  + GPV+ WT+  S DD+ +  G+  G I  ++++   KA     TR KF +S+           G ++G++NIFDV
Sbjct:   80 HNLEGHSLGVVSVAVSHNGKLCASSSLDSSMRIWDLEKGEKIANVDVGPVDLWTVAFSPDDKYIISGS--GKITAYSVET-AKAEQTFETRGKFTLSIXXXXXXXXXXXGAIEGIINIFDV 197          
BLAST of mRNA_H-elongata_contig89643.16462.1 vs. uniprot
Match: A0A183MSN5_9TREM (WD_REPEATS_REGION domain-containing protein n=1 Tax=Schistosoma margrebowiei TaxID=48269 RepID=A0A183MSN5_9TREM)

HSP 1 Score: 96.7 bits (239), Expect = 2.250e-22
Identity = 50/126 (39.68%), Postives = 77/126 (61.11%), Query Frame = 0
Query:    1 ELAPVHSLEGHRLGVLSIRAFNKGKEAVTSSLDSCMRFWDLESGELTAAEEPGPVEAWTLDVSKDDRLLAGGTQKGSINLWALDGHKKARSLSHTRDKFVMSVAFSPDGKWVASGGLDGLVNIFDV 126
            +L  ++  EGHRLGV+S+   + G  A +SSLDS +  WDLE+G+LT   +  P + WT+  S D R LA G+  G +N+  +   +K  S+     KFV S+A+  DG  +A+G ++GLV+I D+
Sbjct:   48 QLKCLYQFEGHRLGVISVDINSTGTLAASSSLDSQILLWDLETGKLTKTYDGDPADTWTVAFSPDSRFLATGSHTGCVNMINVQTAQKEGSIQ-LEGKFVYSLAYISDGSKLAAGTINGLVSICDL 172          
BLAST of mRNA_H-elongata_contig89643.16462.1 vs. uniprot
Match: A0A5N4ATI3_PHOPY (Uncharacterized protein n=3 Tax=Photinus pyralis TaxID=7054 RepID=A0A5N4ATI3_PHOPY)

HSP 1 Score: 97.8 bits (242), Expect = 6.150e-22
Identity = 44/98 (44.90%), Postives = 63/98 (64.29%), Query Frame = 0
Query:    6 HSLEGHRLGVLSIRAFNKGKEAVTSSLDSCMRFWDLESGELTAAEEPGPVEAWTLDVSKDDRLLAGGTQKGSINLWALDGHKKARSLSHTRDKFVMSV 103
            H LEGH LGV+S+   N GK   +SSLDS MR WDL+ GE     + GPV+ WTL  S DD+ +  G+Q G +++++++  K  +SL  TR KF +S+
Sbjct:   75 HELEGHSLGVISVAVSNNGKLCASSSLDSSMRLWDLQKGEKITTIDCGPVDLWTLAFSPDDKHIISGSQAGIVSVYSVETAKLEKSLDTTRGKFTLSI 172          
BLAST of mRNA_H-elongata_contig89643.16462.1 vs. uniprot
Match: UPI00158B79C4 (WD repeat-containing protein 61 n=3 Tax=Braconidae TaxID=7402 RepID=UPI00158B79C4)

HSP 1 Score: 97.4 bits (241), Expect = 8.710e-22
Identity = 46/121 (38.02%), Postives = 68/121 (56.20%), Query Frame = 0
Query:    6 HSLEGHRLGVLSIRAFNKGKEAVTSSLDSCMRFWDLESGELTAAEEPGPVEAWTLDVSKDDRLLAGGTQKGSINLWALDGHKKARSLSHTRDKFVMSVAFSPDGKWVASGGLDGLVNIFDV 126
            H L GH LGV+S+   + G +  +SSLDS +R WDLESGE  +  E GPV+ WT+  S DD  +  G+  G I+++  +  K+ ++L     KF +SVA+              ++NIFDV
Sbjct:   76 HKLSGHSLGVVSVAINSDGTKCASSSLDSSLRLWDLESGEKISTIEVGPVDIWTVVFSPDDEFIVSGSHAGKIHMYRTESCKQEQTLDTRAGKFTLSVAYXXXXXXXXXXXXXXIINIFDV 196          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig89643.16462.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LSR1_ECTSI2.490e-3983.54ANAPC4_WD40 domain-containing protein n=2 Tax=Ecto... [more]
A0A7S2B7M3_9STRA6.240e-3047.97Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A4U1EMH1_MONMO2.560e-2740.97Uncharacterized protein n=1 Tax=Monodon monoceros ... [more]
A0A2C9JG02_BIOGL1.300e-2541.79Uncharacterized protein n=1 Tax=Biomphalaria glabr... [more]
A0A3S3QAI8_9ACAR3.620e-2445.76WD repeat-containing protein 61-like protein n=1 T... [more]
A0A836CKX9_9STRA3.670e-2359.74WD40-repeat-containing domain protein n=1 Tax=Trib... [more]
A0A6P7GLA6_DIAVI8.780e-2341.32WD repeat-containing protein 61 n=1 Tax=Diabrotica... [more]
A0A183MSN5_9TREM2.250e-2239.68WD_REPEATS_REGION domain-containing protein n=1 Ta... [more]
A0A5N4ATI3_PHOPY6.150e-2244.90Uncharacterized protein n=3 Tax=Photinus pyralis T... [more]
UPI00158B79C48.710e-2238.02WD repeat-containing protein 61 n=3 Tax=Braconidae... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 1..40
e-value: 5.5E-4
score: 29.2
coord: 43..82
e-value: 61.0
score: 5.7
coord: 85..125
e-value: 1.9E-6
score: 37.5
IPR001680WD40 repeatPFAMPF00400WD40coord: 91..125
e-value: 6.2E-7
score: 30.0
coord: 4..40
e-value: 0.06
score: 14.2
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 93..126
score: 11.077
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 8..49
score: 11.712
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 1..126
e-value: 1.4E-33
score: 118.1
NoneNo IPR availablePANTHERPTHR44090FAMILY NOT NAMEDcoord: 6..126
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 27..41
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 8..126
score: 21.726
IPR011047Quinoprotein alcohol dehydrogenase-like superfamilySUPERFAMILY50998Quinoprotein alcohol dehydrogenase-likecoord: 3..126

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig89643contigH-elongata_contig89643:686..2559 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig89643.16462.1mRNA_H-elongata_contig89643.16462.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig89643 686..2559 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig89643.16462.1 ID=prot_H-elongata_contig89643.16462.1|Name=mRNA_H-elongata_contig89643.16462.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=126bp
ELAPVHSLEGHRLGVLSIRAFNKGKEAVTSSLDSCMRFWDLESGELTAAE
EPGPVEAWTLDVSKDDRLLAGGTQKGSINLWALDGHKKARSLSHTRDKFV
MSVAFSPDGKWVASGGLDGLVNIFDV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR019775WD40_repeat_CS
IPR017986WD40_repeat_dom
IPR011047Quinoprotein_ADH-like_supfam