prot_H-elongata_contig884.16366.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig884.16366.1
Unique Nameprot_H-elongata_contig884.16366.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length159
Homology
BLAST of mRNA_H-elongata_contig884.16366.1 vs. uniprot
Match: D7FN49_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN49_ECTSI)

HSP 1 Score: 146 bits (368), Expect = 1.800e-41
Identity = 71/129 (55.04%), Postives = 89/129 (68.99%), Query Frame = 0
Query:    4 ELGLSRSFILPVARSISRQLLDFRSSMPAWTSEGTVAAAEENLQMIDIDVRFRSIIYRDRLQWDVNCLNNSPESFARCTVTDLGLPQEMEAPIAFSVHQQLCKHRMAGSRSPTEEDDLIDKSRLGPHIS 132
            ELG+  SF+ P+A+SI +QL+++    P W  EGT+A A EN+Q + IDVRFRS+I+RDRLQWDVNC  NSPE FAR TV DL LPQEME  IA + HQQ+ + RMA   S T  +D   K   GP +S
Sbjct:   51 ELGIGVSFVQPIAQSIGQQLIEYGRKNPMWAVEGTIAPAGENIQTVIIDVRFRSVIFRDRLQWDVNCPYNSPEQFARITVADLNLPQEMEPIIALTTHQQVSRFRMAAPSSTTNNEDAQFKDVEGPCVS 179          
BLAST of mRNA_H-elongata_contig884.16366.1 vs. uniprot
Match: A0A388K753_CHABU (Uncharacterized protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388K753_CHABU)

HSP 1 Score: 56.6 bits (135), Expect = 1.170e-6
Identity = 28/65 (43.08%), Postives = 40/65 (61.54%), Query Frame = 0
Query:   44 ENLQMIDIDVRFRSIIYRDRLQWDVNCLNNSPESFARCTVTDLGLPQEMEAPIAFSVHQQLCKHR 108
            E L  +D+ V F + IY+D++QWD+N   NSPE FA     DL L  +   PIA +V +Q+ +HR
Sbjct:  119 EALVTLDLSVEFGNEIYKDKVQWDLNESQNSPEMFAWQVCEDLRLKVDFMEPIAVTVREQIEQHR 183          
BLAST of mRNA_H-elongata_contig884.16366.1 vs. uniprot
Match: A5DTK9_LODEL (Uncharacterized protein n=1 Tax=Lodderomyces elongisporus (strain ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 / NRRL YB-4239) TaxID=379508 RepID=A5DTK9_LODEL)

HSP 1 Score: 55.8 bits (133), Expect = 3.560e-6
Identity = 30/102 (29.41%), Postives = 55/102 (53.92%), Query Frame = 0
Query:    1 MTEELGLSRSFILPVARSISRQLLDFRSSMPAWTSEGTVAAAEENLQMIDIDVRFRSIIYRDRLQWDVNCLNNSPESFARCTVTDLGLPQEMEAPIAFSVHQ 102
            +  +L L  S    +  SI++QL ++     ++ S  T+ + +    +ID+ V     +Y+DR++WD+N    +PE FA   V DLGL  E +  I+ ++H+
Sbjct:  164 LCNDLELPNSMGQQITDSITQQLEEY-----SYASNLTIQSKDPCNVIIDLSVNLNKQLYQDRIEWDLNQNQVTPEQFAEIVVADLGLSLEFKLAISHALHE 260          
BLAST of mRNA_H-elongata_contig884.16366.1 vs. uniprot
Match: A0A507CBB2_9FUNG (Uncharacterized protein n=1 Tax=Synchytrium microbalum TaxID=1806994 RepID=A0A507CBB2_9FUNG)

HSP 1 Score: 54.3 bits (129), Expect = 1.450e-5
Identity = 40/150 (26.67%), Postives = 70/150 (46.67%), Query Frame = 0
Query:   11 FILPVARSISRQLLDFRSSMPAWTSEGTVAAAEENLQMIDIDVRFRSIIYRDRLQWDVNCLNNSPESFARCTVTDLGLPQEMEAPIAFSVHQQLCKHRMAGSRSPTEEDD-----LIDKSRLGPHISFVHPVDQYEFNSRDWSNHRPTSK 155
            + L +A+ I  QL ++     A+ S+  +   E+    I +D+    +  +D+ +WD+N  +  PE FAR  V DLGL  E  + IA+S+ +QL +HR+       +  +     L D+   G     VH ++  +         R T+K
Sbjct:  546 YALQMAQMIQNQLSEYA----AFYSDVDLPPGEDVRVKIQLDLNCGKLHLQDQFEWDLNS-DYLPEDFARNLVADLGLGGEFVSMIAYSIREQLHRHRVTQLLEDADGGEPLVTILRDEREAGEWEPVVHVLNDEDMEKLTAERERVTAK 690          
BLAST of mRNA_H-elongata_contig884.16366.1 vs. uniprot
Match: H8WWU6_CANO9 (Uncharacterized protein n=3 Tax=Candida TaxID=1535326 RepID=H8WWU6_CANO9)

HSP 1 Score: 53.1 bits (126), Expect = 3.020e-5
Identity = 29/102 (28.43%), Postives = 53/102 (51.96%), Query Frame = 0
Query:    1 MTEELGLSRSFILPVARSISRQLLDFRSSMPAWTSEGTVAAAEENLQMIDIDVRFRSIIYRDRLQWDVNCLNNSPESFARCTVTDLGLPQEMEAPIAFSVHQ 102
            +  +L L    I  +A SI++Q+ ++     ++ S  ++        +ID+ V     +Y+DR++WD+N    +PE FA   V DLGL  E    I+ ++H+
Sbjct:  155 LCNDLELPNPMIGQIADSITQQIEEY-----SYASNLSIPNRNPCNVIIDLSVNLNKQLYQDRIEWDLNQNEITPEKFAEIVVADLGLSLEFNLAISHALHE 251          
BLAST of mRNA_H-elongata_contig884.16366.1 vs. uniprot
Match: A0A0U9HLK8_KLENI (Uncharacterized protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A0U9HLK8_KLENI)

HSP 1 Score: 52.0 bits (123), Expect = 4.120e-5
Identity = 32/104 (30.77%), Postives = 49/104 (47.12%), Query Frame = 0
Query:    1 MTEELGLSRSFILPVARSISRQLLDFRSSMPAWTSEGTVAAAEENLQMIDIDVRFRSIIYRDRLQWDVNCLNNSPESFARCTVTDLGLPQEMEAPIAFSVHQQL 104
            M EELG+  +    +A  ++  L  +                +E+L  ++++V      Y+DR+ WD+N   NSP+ FA    TDLGLP     PI   V +QL
Sbjct:   49 MWEELGVPAALERVIATQLNVGLKKYHKK----------DLCKEHLVEVNLNVELEGRTYKDRVLWDLNEPQNSPDEFAFSVCTDLGLPMSFVDPIRTDVLKQL 142          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig884.16366.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D7FN49_ECTSI1.800e-4155.04Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A388K753_CHABU1.170e-643.08Uncharacterized protein n=1 Tax=Chara braunii TaxI... [more]
A5DTK9_LODEL3.560e-629.41Uncharacterized protein n=1 Tax=Lodderomyces elong... [more]
A0A507CBB2_9FUNG1.450e-526.67Uncharacterized protein n=1 Tax=Synchytrium microb... [more]
H8WWU6_CANO93.020e-528.43Uncharacterized protein n=3 Tax=Candida TaxID=1535... [more]
A0A0U9HLK8_KLENI4.120e-530.77Uncharacterized protein n=1 Tax=Klebsormidium nite... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006939SNF5/SMARCB1/INI1PFAMPF04855SNF5coord: 48..108
e-value: 5.4E-14
score: 52.6
IPR006939SNF5/SMARCB1/INI1PANTHERPTHR10019SNF5coord: 2..109

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig884contigH-elongata_contig884:15738..17690 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig884.16366.1mRNA_H-elongata_contig884.16366.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig884 15707..18229 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig884.16366.1 ID=prot_H-elongata_contig884.16366.1|Name=mRNA_H-elongata_contig884.16366.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=159bp
MTEELGLSRSFILPVARSISRQLLDFRSSMPAWTSEGTVAAAEENLQMID
IDVRFRSIIYRDRLQWDVNCLNNSPESFARCTVTDLGLPQEMEAPIAFSV
HQQLCKHRMAGSRSPTEEDDLIDKSRLGPHISFVHPVDQYEFNSRDWSNH
RPTSKSTN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006939SNF5