prot_H-elongata_contig87728.16304.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig87728.16304.1
Unique Nameprot_H-elongata_contig87728.16304.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length51
Homology
BLAST of mRNA_H-elongata_contig87728.16304.1 vs. uniprot
Match: D8LJ35_ECTSI (Polyketide Synthase III n=3 Tax=Phaeophyceae TaxID=2870 RepID=D8LJ35_ECTSI)

HSP 1 Score: 98.2 bits (243), Expect = 6.100e-23
Identity = 49/50 (98.00%), Postives = 50/50 (100.00%), Query Frame = 0
Query:    1 MLSPSVMFVLSRVFKRHNAALAQGKPGYQTGMAFSFSPGVGAEGILLKQI 50
            MLSPSVMFVLSRVFKRHNAALAQGKPGYQTGMAFSFSPGVGAEGILL+QI
Sbjct:  365 MLSPSVMFVLSRVFKRHNAALAQGKPGYQTGMAFSFSPGVGAEGILLRQI 414          
BLAST of mRNA_H-elongata_contig87728.16304.1 vs. uniprot
Match: A0A7S2V1U6_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V1U6_9STRA)

HSP 1 Score: 89.0 bits (219), Expect = 1.750e-19
Identity = 44/50 (88.00%), Postives = 47/50 (94.00%), Query Frame = 0
Query:    1 MLSPSVMFVLSRVFKRHNAALAQGKPGYQTGMAFSFSPGVGAEGILLKQI 50
            MLSPSVMFVL RVFKRHNAALAQGK GY+ G+AFSFSPGVGAEGILLKQ+
Sbjct:  404 MLSPSVMFVLERVFKRHNAALAQGKKGYRQGLAFSFSPGVGAEGILLKQL 453          
BLAST of mRNA_H-elongata_contig87728.16304.1 vs. uniprot
Match: A0A6V1RDH2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1RDH2_HETAK)

HSP 1 Score: 79.7 bits (195), Expect = 3.180e-16
Identity = 39/49 (79.59%), Postives = 44/49 (89.80%), Query Frame = 0
Query:    1 MLSPSVMFVLSRVFKRHNAALAQGKPGYQTGMAFSFSPGVGAEGILLKQ 49
            MLSPSVMFVLSRVFKRH A + +G+ GY+ G+AFSFSPGVGAEGILLKQ
Sbjct:  362 MLSPSVMFVLSRVFKRHQAMIRRGETGYKQGLAFSFSPGVGAEGILLKQ 410          
BLAST of mRNA_H-elongata_contig87728.16304.1 vs. uniprot
Match: A0A6U3S2B4_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A6U3S2B4_9STRA)

HSP 1 Score: 70.9 bits (172), Expect = 2.250e-14
Identity = 36/48 (75.00%), Postives = 38/48 (79.17%), Query Frame = 0
Query:    1 MLSPSVMFVLSRVFKRHNAALAQGKPGYQTGMAFSFSPGVGAEGILLK 48
            MLSPSVMFVL  V K HN  LA GK G+  G+AFSFSPGVGAEGILLK
Sbjct:   84 MLSPSVMFVLELVMKEHNENLAAGKEGFSQGLAFSFSPGVGAEGILLK 131          
BLAST of mRNA_H-elongata_contig87728.16304.1 vs. uniprot
Match: A0A7S2C201_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2C201_9STRA)

HSP 1 Score: 70.9 bits (172), Expect = 9.570e-14
Identity = 36/48 (75.00%), Postives = 38/48 (79.17%), Query Frame = 0
Query:    1 MLSPSVMFVLSRVFKRHNAALAQGKPGYQTGMAFSFSPGVGAEGILLK 48
            MLSPSVMFVL  V K HN  LA GK G+  G+AFSFSPGVGAEGILLK
Sbjct:  156 MLSPSVMFVLELVMKEHNENLAAGKEGFSQGLAFSFSPGVGAEGILLK 203          
BLAST of mRNA_H-elongata_contig87728.16304.1 vs. uniprot
Match: A0A8J2SDG4_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SDG4_9STRA)

HSP 1 Score: 63.9 bits (154), Expect = 1.340e-10
Identity = 31/48 (64.58%), Postives = 38/48 (79.17%), Query Frame = 0
Query:    1 MLSPSVMFVLSRVFKRHNAALAQGKPGYQTGMAFSFSPGVGAEGILLK 48
            MLSPSVMFVL  +   H  ALA+G+ G + G+AFSFSPGVGAEG+L+K
Sbjct:  369 MLSPSVMFVLELILNDHKKALAKGERGLKQGIAFSFSPGVGAEGVLIK 416          
BLAST of mRNA_H-elongata_contig87728.16304.1 vs. uniprot
Match: A0A836CMD8_9STRA (Polyketide synthase III n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMD8_9STRA)

HSP 1 Score: 63.9 bits (154), Expect = 1.350e-10
Identity = 31/38 (81.58%), Postives = 33/38 (86.84%), Query Frame = 0
Query:    1 MLSPSVMFVLSRVFKRHNAALAQGKPGYQTGMAFSFSP 38
            MLSPSVM+VLSRVF RH AALA GKPGY  G+AFSFSP
Sbjct:  373 MLSPSVMYVLSRVFARHQAALAAGKPGYAMGLAFSFSP 410          
BLAST of mRNA_H-elongata_contig87728.16304.1 vs. uniprot
Match: A0A7S2WPY4_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WPY4_9STRA)

HSP 1 Score: 63.9 bits (154), Expect = 1.360e-10
Identity = 31/48 (64.58%), Postives = 36/48 (75.00%), Query Frame = 0
Query:    1 MLSPSVMFVLSRVFKRHNAALAQGKPGYQTGMAFSFSPGVGAEGILLK 48
            MLSPSVMFVL  +   H   L  G+ G++ G+AFSFSPGVGAEGILLK
Sbjct:  396 MLSPSVMFVLELILNEHKRQLTAGEEGFKQGLAFSFSPGVGAEGILLK 443          
BLAST of mRNA_H-elongata_contig87728.16304.1 vs. uniprot
Match: A0A6T7DYK4_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A6T7DYK4_9STRA)

HSP 1 Score: 63.2 bits (152), Expect = 2.480e-10
Identity = 31/48 (64.58%), Postives = 35/48 (72.92%), Query Frame = 0
Query:    1 MLSPSVMFVLSRVFKRHNAALAQGKPGYQTGMAFSFSPGVGAEGILLK 48
            MLSPSVMFVL  +   H   L +G  G+  G+AFSFSPGVGAEGILLK
Sbjct:  345 MLSPSVMFVLELILNEHKDELKKGNDGFSQGLAFSFSPGVGAEGILLK 392          
BLAST of mRNA_H-elongata_contig87728.16304.1 vs. uniprot
Match: F0Y6J5_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y6J5_AURAN)

HSP 1 Score: 62.4 bits (150), Expect = 3.730e-10
Identity = 31/48 (64.58%), Postives = 37/48 (77.08%), Query Frame = 0
Query:    1 MLSPSVMFVLSRVFKRHNAALAQGKPGYQTGMAFSFSPGVGAEGILLK 48
            MLSPSVMFVL  +   H  ALA+G+ G + G+AFSFSPGVGAEGIL+ 
Sbjct:  248 MLSPSVMFVLELILNDHKKALAKGERGLKQGIAFSFSPGVGAEGILIN 295          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig87728.16304.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 12
Match NameE-valueIdentityDescription
D8LJ35_ECTSI6.100e-2398.00Polyketide Synthase III n=3 Tax=Phaeophyceae TaxID... [more]
A0A7S2V1U6_9STRA1.750e-1988.00Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A6V1RDH2_HETAK3.180e-1679.59Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A6U3S2B4_9STRA2.250e-1475.00Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S2C201_9STRA9.570e-1475.00Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A8J2SDG4_9STRA1.340e-1064.58Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A836CMD8_9STRA1.350e-1081.58Polyketide synthase III n=1 Tax=Tribonema minus Ta... [more]
A0A7S2WPY4_9STRA1.360e-1064.58Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A6T7DYK4_9STRA2.480e-1064.58Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
F0Y6J5_AURAN3.730e-1064.58Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012328Chalcone/stilbene synthase, C-terminalPFAMPF02797Chal_sti_synt_Ccoord: 2..50
e-value: 7.0E-5
score: 22.8
IPR016039Thiolase-likeGENE3D3.40.47.10coord: 1..50
e-value: 2.1E-9
score: 38.9

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig87728contigH-elongata_contig87728:426..578 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig87728.16304.1mRNA_H-elongata_contig87728.16304.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig87728 1..1945 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig87728.16304.1 ID=prot_H-elongata_contig87728.16304.1|Name=mRNA_H-elongata_contig87728.16304.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=51bp
MLSPSVMFVLSRVFKRHNAALAQGKPGYQTGMAFSFSPGVGAEGILLKQI
*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012328Chalcone/stilbene_synth_C
IPR016039Thiolase-like