prot_H-elongata_contig85305.16127.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig85305.16127.1
Unique Nameprot_H-elongata_contig85305.16127.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length304
Homology
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BLAST of mRNA_H-elongata_contig85305.16127.1 vs. uniprot
Match: D7FHH0_ECTSI (DUF6314 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FHH0_ECTSI)

HSP 1 Score: 215 bits (547), Expect = 1.330e-65
Identity = 127/221 (57.47%), Postives = 147/221 (66.52%), Query Frame = 0 
Query:   91 ASLCLETAADVYRYLCGRWDLKKSIDYKVGGMAGTWDGVAAFSPEQQRP-----EEAEGQFHHYGKESSALGLDRELDNGSRV-LRYLERGVFKINGVGEGFQAGQRLVYDCGNRSGPV-RVHFVDDPKKPNALRFFHELDFRTTSSASAASTIGAAFRNGRGGKSDGAEEGGGVKRCLGGDEVNPTASWSPRAEFEHLCVRDLYRGEVEVLGPNEFRTRW 304
            ASL L+T A VYRYL GRW L+K+IDYK GGMAGTW GVA FSP+QQ+       + EG+ +H G      G D E+D+ S + LRY E+G F++NG G GF+AGQRLVYDC   SGPV RVHFVDDPKKP+ALRFFHELDF+T S      T GA    G GG      E GG      G    P     PRAEFEHLCVRD+YRG+VEV GPNEF+T W
Sbjct:   28 ASLGLDTPAGVYRYLRGRWGLEKTIDYKAGGMAGTWRGVATFSPKQQQACDGSNTKEEGEQNHDGD-----GQD-EMDHSSLLFLRYREQGTFRVNGEGAGFEAGQRLVYDC---SGPVVRVHFVDDPKKPDALRFFHELDFQTASPYET--TAGA----GTGG------EAGGTGVAAAGASFAPPP---PRAEFEHLCVRDMYRGKVEVAGPNEFKTSW 224
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig85305.16127.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FHH0_ECTSI1.330e-6557.47DUF6314 domain-containing protein n=2 Tax=Ectocarp... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..304
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..21

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig85305contigH-elongata_contig85305:1030..2013 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig85305.16127.1mRNA_H-elongata_contig85305.16127.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig85305 1030..2013 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig85305.16127.1 ID=prot_H-elongata_contig85305.16127.1|Name=mRNA_H-elongata_contig85305.16127.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=304bp
MTPRAKLLAVAFCGYLNPALRLRRTSTIHNIFHHLEGSLASVSTFEKLLH
SLRSKNLPLQSSSPWMIAPSSTTARACTGETAPTTAGVSGASLCLETAAD
VYRYLCGRWDLKKSIDYKVGGMAGTWDGVAAFSPEQQRPEEAEGQFHHYG
KESSALGLDRELDNGSRVLRYLERGVFKINGVGEGFQAGQRLVYDCGNRS
GPVRVHFVDDPKKPNALRFFHELDFRTTSSASAASTIGAAFRNGRGGKSD
GAEEGGGVKRCLGGDEVNPTASWSPRAEFEHLCVRDLYRGEVEVLGPNEF
RTRW
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