prot_H-elongata_contig85.16097.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig85.16097.1
Unique Nameprot_H-elongata_contig85.16097.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length250
Homology
BLAST of mRNA_H-elongata_contig85.16097.1 vs. uniprot
Match: D8LBD9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBD9_ECTSI)

HSP 1 Score: 262 bits (670), Expect = 9.820e-85
Identity = 154/245 (62.86%), Postives = 178/245 (72.65%), Query Frame = 0
Query:    1 MLVRSLLMTVFLLALYGCLRVQSFIGATVLHRRVGSDQH----ISLSRNGKCGRSWRSRVYRQREGRRETAA-MMARGSTFRSRGESKRQARVSQLVATELAKIFRLGHGIKTRDKITDDVRCKIGVVDVDMSPDLRTAKVFISVLGDVLEKREAYSWCVKNAKSIRMALAVELKGMKRVPELYFRDMDIGASVDLMALIDKVSEEDEEVAAAAARGDTAEYDYGLDRDVDGFEGITEDDFFTFN 240
            M VRSL++   L+  YGC  V SF+G +VL R     Q     +  S +G+CG  W   V      RR TA  MMARGSTFRS  ESKRQARVSQL+  ELAKI RLGHGIKT+DKI DDVRC+I VVDVDMSPDLR+AKVFISV GDVLEKREAY+WCVKN K+IRMAL  ELKGMKRVPEL+F+D DI A+VDLMALID+VS  DE+   AA R D  E       +++GFEG+TEDDFFTF+
Sbjct:    1 MAVRSLVIAAALITAYGCREVLSFVGVSVLPRACSQQQQPQQCLGASGHGRCG--WVGAVQPPPGKRRPTATVMMARGSTFRSTTESKRQARVSQLLTGELAKILRLGHGIKTKDKIDDDVRCRIAVVDVDMSPDLRSAKVFISVYGDVLEKREAYAWCVKNTKAIRMALCAELKGMKRVPELFFKDTDISAAVDLMALIDRVSG-DEDGNEAALRDDGEE-------EIEGFEGVTEDDFFTFD 235          
BLAST of mRNA_H-elongata_contig85.16097.1 vs. uniprot
Match: A0A835ZHE8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHE8_9STRA)

HSP 1 Score: 147 bits (372), Expect = 3.200e-40
Identity = 77/135 (57.04%), Postives = 99/135 (73.33%), Query Frame = 0
Query:   66 TAAMMARGSTFRS-RGESKRQARVSQLVATELAKIFRLGHGIKTRDKITDDVRCKIGVVDVDMSPDLRTAKVFISVLGDVLEKREAYSWCVKNAKSIRMALAVELKGMKRVPELYFRDMDIGASVDLMALIDKVS 199
            T   M R + F++ R ESKRQAR+SQL+  ELA I RLGH +K    ++D++R KI +VDV++SPDLR A++F+SV GD LEKREAY WCV+N   IR AL+  LK MK VPEL F+  DIGA+VD+M LI KV+
Sbjct:   52 TQLRMGRANRFKAARPESKRQARISQLLTAELASIIRLGHHVKGSKALSDELRSKISIVDVNVSPDLRNARIFVSVYGDRLEKREAYGWCVRNTGGIRFALSQRLKDMKGVPELTFQQTDIGAAVDVMHLIGKVN 186          
BLAST of mRNA_H-elongata_contig85.16097.1 vs. uniprot
Match: A0A7S2DN30_9STRA (Hypothetical protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DN30_9STRA)

HSP 1 Score: 127 bits (320), Expect = 3.940e-32
Identity = 64/132 (48.48%), Postives = 92/132 (69.70%), Query Frame = 0
Query:   70 MARGSTFRSRGESKRQARVSQLVATELAKIFRLGHGIKTRDKITDDVRCKIGVVDVDMSPDLRTAKVFISVLGDVLEKREAYSWCVKNAKSIRMALAVELKGMKRVPELYFRDMDIGASVDLMALIDKVSEE 201
            M+RG+      ESKRQ RVSQ++ +E+  I R G     +  I D +R KI +VDV MSPDLRTAKV++SV GD++++R+AYSW V N+K+I+ +LA  L  MK VP+LYF++ D+ A+VD+M  I+ +  E
Sbjct:   45 MSRGNAVSKGRESKRQGRVSQVIRSEIVTILRRGSMKYMKKDIGDTLRQKISIVDVHMSPDLRTAKVYVSVFGDIVDRRQAYSWLVMNSKAIKHSLAQSLSAMKTVPDLYFKETDLAAAVDVMTTIESIHAE 176          
BLAST of mRNA_H-elongata_contig85.16097.1 vs. uniprot
Match: A0A7S1U3D0_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U3D0_9STRA)

HSP 1 Score: 120 bits (301), Expect = 6.040e-30
Identity = 74/193 (38.34%), Postives = 110/193 (56.99%), Query Frame = 0
Query:   62 GRRETAAMMARG-STFRSRGESKRQARVSQLVATELAKIFRLGHGIKTRDKITDDVRCKIGVVDVDMSPDLRTAKVFISVLGDVLEKREAYSWCVKNAKSIRMALAVELKGMKRVPELYFRDMDIGASVDLMALIDKVSEEDEEVAAAAARGDTAEYDYGLDR-----DVDGFEGITEDDFFTFNFDDKDGEE 248
            G R    M ARG S  R R ES+RQ+R++QLV  E++ I   GHG+++   I  ++R  I +VDVD+SPDLR   +++SV GD   KREA++W V++ +++R  LA   +G+KR+PE+ F+  D+ A+VD+  LI       EE        +  EYD          DV G   + ++D   F  DD+D EE
Sbjct:   21 GARAPMTMGARGGSLVRRRDESRRQSRIAQLVKAEVSAILLTGHGVRSPRDIDGELRKAISIVDVDVSPDLRNCNIYVSVRGDGAGKREAFAWLVRSTRALRHVLAQRNRGLKRIPEILFKQADVSAAVDVFRLI-------EEANGTGMYAEQGEYDXXXXXXXXXDDVFGLGAVDDEDLDMFMDDDEDFEE 206          
BLAST of mRNA_H-elongata_contig85.16097.1 vs. uniprot
Match: A0A7S2SUM5_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SUM5_9STRA)

HSP 1 Score: 114 bits (284), Expect = 3.110e-27
Identity = 78/186 (41.94%), Postives = 106/186 (56.99%), Query Frame = 0
Query:   69 MMARGSTFRSRGESKRQARVSQLVATELAKIFRLGHGIKTRDKITDDVRCKIGVVDVDMSPDLRTAKVFISVLGDVLEKREAYSWCVKNAKSIRMALAVELKGMKRVPELYFRDMDIGASVDLMALIDKVSEEDEEVAAAAARGDTAEYDYGLDRDVDGFE---GITED-----DFFTFNFDDKDG 246
            + ARG     R ESKRQARV+QLV  EL+++ R G    T+  IT+  R KI +VDV MSPDLR AKVF+SV     E R+AY+W V+++ + R  L+ EL+ M+ VP L FR  D+  +VD+M  ID +++          R  T        RD +GFE   G+ +D     DF  F+ DD DG
Sbjct:   54 VQARGPGVGRRDESKRQARVAQLVRAELSQVIRQGTRANTKG-ITEATRQKISIVDVHMSPDLRNAKVFVSVFASGPESRQAYAWLVQSSGAFRHELSQELRHMRSVPALTFRRADVAEAVDVMVAIDNLND---------GRART--------RDEEGFEDWLGVEDDFGDVADFLQFSDDDDDG 221          
BLAST of mRNA_H-elongata_contig85.16097.1 vs. uniprot
Match: A0A7R9W0U4_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9W0U4_9STRA)

HSP 1 Score: 113 bits (282), Expect = 7.580e-27
Identity = 62/131 (47.33%), Postives = 88/131 (67.18%), Query Frame = 0
Query:   74 STFRSRGESKRQARVSQLVATELAKIFRLGHGIKTRDKITDDVRCKIGVVDVDMSPDLRTAKVFISVLG----DVLEKREAYSWCVKNAKSIRMALAVELKGMKRVPELYFRDMDIGASVDLMALIDKVSE 200
            S + +   SKRQ RV  +V +ELA+I + G  IK  D I D++R +I VV+ D+SPDLR A+V +S++G      ++KR AYSW V++ K IR A+A  LK MK  P+L F   D+GA+VD+M LI+KVS+
Sbjct:   47 SRYAASDRSKRQERVGHVVRSELARIIQAGFPIKNVDPIDDELRRRINVVNADVSPDLRHARVTVSIIGRGETSTVDKRRAYSWLVRSTKMIRHAMAQRLKHMKVCPDLKFVQADVGAAVDVMRLIEKVSD 177          
BLAST of mRNA_H-elongata_contig85.16097.1 vs. uniprot
Match: F0Y767_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y767_AURAN)

HSP 1 Score: 113 bits (282), Expect = 9.780e-27
Identity = 72/167 (43.11%), Postives = 100/167 (59.88%), Query Frame = 0
Query:   67 AAMMARGSTFRSRGE---SKRQARVSQLVATELAKIFRLGHG-IKTRDKITDDVRCKIGVVDVDMSPDLRTAKVFISVLGDVLEKREAYSWCVKNAKSIRMALAVELKGMKRVPELYFRDMDIGASVDLMALIDKVSEEDEEVAAAAARGDTAEYDYGLDRDVDGFE 229
            A  M RGS   +R E   S+RQ+RV+QLV +ELA + R G   +KT D++  +V     V+DV +SPDLR A   I+ LGD   KREA+SW VKN +S+R ALA  LK  KRVP + FR  D+ A+  LM LID+ +++  +  A    G   ++D  LD + +  E
Sbjct:   28 AVRMGRGSRGMAREEVDRSRRQSRVAQLVRSELATVIRDGAFLVKTGDRVDAEVLKSTSVLDVSVSPDLRAATATITTLGDTSAKREAFSWLVKNERSVRYALAKRLKHSKRVPAVTFRKADVSAATKLMDLIDRAADDGGDGGAGVIDG--LDFDLDLDDEAEAVE 192          
BLAST of mRNA_H-elongata_contig85.16097.1 vs. uniprot
Match: A0A7S2NYX9_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2NYX9_9STRA)

HSP 1 Score: 107 bits (266), Expect = 2.360e-24
Identity = 62/132 (46.97%), Postives = 84/132 (63.64%), Query Frame = 0
Query:   81 ESKRQARVSQLVATELAKIFRLGHGIKTRDKITD-DVRCKIGVVDVDMSPDLRTAKVFISVLGD------------VLEKREAYSWCVKNAKSIRMALAVELKGMKRVPELYFRDMDIGASVDLMALIDKVS 199
            +SKRQ RV QLV +E+A I +LGH IK  D   D D+R +I VV+ D+SPDLR A++ +SV+              V+EKR AYSW VK+ K+IR ALA  L  MK +P L F   D+GA+VD+M  I+ ++
Sbjct:   66 KSKRQFRVGQLVRSEIASIIKLGHEIKHTDGSLDSDLRLRISVVNADVSPDLRQARITVSVISKPNTDETAKLSDTVVEKRVAYSWLVKHTKNIRHALAQRLSHMKTIPNLTFAQADVGAAVDVMNKINNIN 197          
BLAST of mRNA_H-elongata_contig85.16097.1 vs. uniprot
Match: A0A7S3F0D2_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3F0D2_9EUKA)

HSP 1 Score: 103 bits (258), Expect = 7.860e-24
Identity = 60/131 (45.80%), Postives = 83/131 (63.36%), Query Frame = 0
Query:   87 RVSQLVATELAKIFRLG--HGIKTRDKITDDVRCKIGVVDVDMSPDLRTAKVFISVLGDVLEKREAYSWCVKNAKSIRMALAVELKGMKRVPELYFRDMDIGASVDLMALIDKVSEEDEEVAAAAARGDTA 215
            RV Q+V +ELA +   G  HG K   KI+  +   I +VD+DMSPDLR A+V +S++GD  +K  A  W   +AK IR  LA  LKGMKR+P+L F+ +D+GA+VD+M  I ++SEE +   AA   G  A
Sbjct:    3 RVGQVVRSELATVLHSGAVHGNK---KISGRLLSMISIVDIDMSPDLRNARVKVSIIGDRKDKISAVRWLQGSAKPIRHVLAQRLKGMKRIPQLSFQHVDVGAAVDMMVKIQELSEERQRAEAARGEGGDA 130          
BLAST of mRNA_H-elongata_contig85.16097.1 vs. uniprot
Match: A0A7S2UPV8_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UPV8_9STRA)

HSP 1 Score: 104 bits (260), Expect = 1.400e-23
Identity = 60/134 (44.78%), Postives = 85/134 (63.43%), Query Frame = 0
Query:   74 STFRSRGESKRQARVSQLVATELAKIFRLGHGIKTRDKITDDVRCKIGVVDVDMSPDLRTAKVFISVLGD--------VLEKREAYSWCVKNAKSIRMALAVELKGMKRVPELYFRDMDIGASVDLMALIDKVS 199
            S + S+  SKRQ RV  LV  E++ I  L H IK  D +  ++R +I VV+VD+SPDL  A++ +S++G         V+++R AYSW V++ K IR ALA  L  MK VP L F   D+GA+VD+M LI+KV+
Sbjct:   55 SRYGSQDRSKRQERVGHLVRAEISSILTLSHEIKHSDYLEGELRKRISVVNVDVSPDLAQARITVSLVGGNHDTKEDAVVDQRRAYSWLVRSTKMIRHALAQRLSHMKGVPNLTFVLADVGAAVDVMQLIEKVA 188          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig85.16097.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LBD9_ECTSI9.820e-8562.86Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835ZHE8_9STRA3.200e-4057.04Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2DN30_9STRA3.940e-3248.48Hypothetical protein n=2 Tax=Dictyocha speculum Ta... [more]
A0A7S1U3D0_9STRA6.040e-3038.34Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S2SUM5_9STRA3.110e-2741.94Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7R9W0U4_9STRA7.580e-2747.33Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]
F0Y767_AURAN9.780e-2743.11Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A7S2NYX9_9STRA2.360e-2446.97Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A7S3F0D2_9EUKA7.860e-2445.80Hypothetical protein n=1 Tax=Haptolina ericina Tax... [more]
A0A7S2UPV8_9STRA1.400e-2344.78Hypothetical protein n=1 Tax=Attheya septentrional... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000238Ribosome-binding factor APFAMPF02033RBFAcoord: 84..181
e-value: 2.3E-14
score: 53.7
IPR000238Ribosome-binding factor APANTHERPTHR33515FAMILY NOT NAMEDcoord: 59..230
IPR015946K homology domain-like, alpha/betaGENE3D3.30.300.20coord: 82..185
e-value: 7.9E-16
score: 59.9
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..20
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 21..249
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..15
NoneNo IPR availablePRODOMPD007327coord: 87..180
e-value: 2.0E-4
score: 107.0
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..18
score: 5.0
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..23
score: 0.738
IPR023799Ribosome-binding factor A domain superfamilySUPERFAMILY89919Ribosome-binding factor A, RbfAcoord: 81..181

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig85contigH-elongata_contig85:8149..8898 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig85.16097.1mRNA_H-elongata_contig85.16097.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig85 8138..9377 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig85.16097.1 ID=prot_H-elongata_contig85.16097.1|Name=mRNA_H-elongata_contig85.16097.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=250bp
MLVRSLLMTVFLLALYGCLRVQSFIGATVLHRRVGSDQHISLSRNGKCGR
SWRSRVYRQREGRRETAAMMARGSTFRSRGESKRQARVSQLVATELAKIF
RLGHGIKTRDKITDDVRCKIGVVDVDMSPDLRTAKVFISVLGDVLEKREA
YSWCVKNAKSIRMALAVELKGMKRVPELYFRDMDIGASVDLMALIDKVSE
EDEEVAAAAARGDTAEYDYGLDRDVDGFEGITEDDFFTFNFDDKDGEED*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000238RbfA
IPR015946KH_dom-like_a/b
IPR023799RbfA_dom_sf