prot_H-elongata_contig8429.16043.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig8429.16043.1
Unique Nameprot_H-elongata_contig8429.16043.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length522
Homology
BLAST of mRNA_H-elongata_contig8429.16043.1 vs. uniprot
Match: D7FM87_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FM87_ECTSI)

HSP 1 Score: 240 bits (613), Expect = 1.210e-69
Identity = 190/531 (35.78%), Postives = 248/531 (46.70%), Query Frame = 0
Query:   18 VDPLDAFMASIDSEIMQQAALAAASAKPPSSTGIIVPIPAALPRPFDTQPAPAQLAAAKKVANSPFIVALQRRKGKKIGNGDHQGSREAGVGMTDASDSFVRLLQSHPSEFLRSYGHILSPADLDDLVPSLDPEVVLHVRRLQALMSRQRDMMNDSSHDHFCTGALAESKLATAATVLGESGGPYRERRGERHSRPPGG-----------ARIRNRRYKRLHQLAEGGVWFSDEAMKERDPWLWHEFVGRQAGEEKPAPRDAVDRIPGSTSMGTYLKESLTFLSQPQV-GNWPSETSVRATTRERGSSLSLTFFSRLATGPIRVEQGEQLPEDTRPPEGSALTADEEAMDDEAEEKLEPGDIPDSS----QVTPSAGARSLPG-----------DASSGGDTGVTAAFRVRDNAEAGTRGTGRDARSDVVDDDRRITFADGIG---GGGRDQNAPDTVGMQVEAEERDSEEEAGDGETGREAVVRILWERFLDGEEEGVNYADVDGDERLDDLDQIARDEEDRWFGGQEDD 518
            +DPLDA+M S+  E+ QQA     + +PP  +            P   QP+PAQL  A KVA SPF   L                        +A+++ ++LL   P EFL  +GHIL+P DL+ L+PS DP V LHV RL+ LM  Q                                                             AR+RNRRY+RL QLAEGGVWFSDEAMKERDPWLW E+VG+ AGEEKPAP+ AV+ +PGSTS+GTYL+ESL FLSQ Q  G WP  T +  +    G           + G   +               S + AD  A D  A E ++  D+P+++    +VT    A  +P            DA +   T    A  ++D+ +          ++DV  D RR+ F+D +G   GGG                             GRE V RIL ERFL G E+GV+Y  VDGDERLDDLDQ++RDE+DRWF G+E+D
Sbjct:   14 IDPLDAYMDSLADEVTQQAE--DDTVQPPPWS------------PSSQQPSPAQLEVADKVAASPFCNVLPPA---------------TTSSSAEAAEACLKLLLHQPGEFLSRFGHILTPGDLESLLPSQDPAVALHVARLKTLMLSQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARVRNRRYRRLQQLAEGGVWFSDEAMKERDPWLWFEYVGKHAGEEKPAPKQAVEEVPGSTSVGTYLQESLGFLSQKQPNGGWP--TGLPTSGAGAGXXXXXXXXXXTSLGMAFL---------------SGVCADAGARDVAAGETVDSSDVPEAASSQAEVTAVPIASGMPDGRERHACEDDVDARAAAVTAAVGAIGLQDDGK----------KADV--DGRRVRFSDEMGSDGGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGREEVARILSERFLAGLEQGVDYRSVDGDERLDDLDQLSRDEQDRWFLGEEED 486          
BLAST of mRNA_H-elongata_contig8429.16043.1 vs. uniprot
Match: F2TWH5_SALR5 (DUF2052 domain-containing protein n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2TWH5_SALR5)

HSP 1 Score: 60.1 bits (144), Expect = 2.890e-6
Identity = 33/88 (37.50%), Postives = 48/88 (54.55%), Query Frame = 0
Query:  219 IRNRRYKRLHQLAEGGVWFSDEAMKERDPWLWHEFVGRQAGEEKPAPRDAV------DRIPGSTSMGTYLKESLTFLSQPQVGNWPSE 300
            +RNRRY+R+ QL + G +FS+EAMKER PWL+ +FVGR   + +   R         D++   T +G    E L    Q  + +W  E
Sbjct:   91 VRNRRYRRMQQLLQEGTFFSEEAMKERCPWLYDQFVGRYLSDAEVEQRVQTVTQCWSDQLLAHT-VGQRTTERLHLEQQAALASWEEE 177          
BLAST of mRNA_H-elongata_contig8429.16043.1 vs. uniprot
Match: A0A0D9WLK8_9ORYZ (DUF2052 domain-containing protein n=1 Tax=Leersia perrieri TaxID=77586 RepID=A0A0D9WLK8_9ORYZ)

HSP 1 Score: 58.5 bits (140), Expect = 1.020e-5
Identity = 43/146 (29.45%), Postives = 62/146 (42.47%), Query Frame = 0
Query:  112 DASDSFVRLLQSHPSEFLRSYGHILSPADLDDLVP-SLDPEVVLHVRRLQALMSRQRDMMNDSSHDHFCTGALAESKLATAATVLGESGGPYRERRGERHSRPPGGARIRNRRYKRLHQLAEGGVWFSDEAMKERDPWLWHEFVGR 256
            D   + + LL      FL  YG  L+P++L    P + D EV  H+RRL++  S                                                PPG +R+RNRR   L +L   G +FS+EAM+ER+P+L HE++GR
Sbjct:   36 DRKATLLALLARDAPLFLERYGESLTPSELAAFDPLAADYEVGWHLRRLRSAAS------------------------------------------------PPGASRVRNRRRAYLDRLVREGDYFSEEAMREREPYLHHEYLGR 133          
BLAST of mRNA_H-elongata_contig8429.16043.1 vs. uniprot
Match: A0A1D1YCT0_9ARAE (Coiled-coil domain-containing protein 97 (Fragment) n=1 Tax=Anthurium amnicola TaxID=1678845 RepID=A0A1D1YCT0_9ARAE)

HSP 1 Score: 56.2 bits (134), Expect = 3.000e-5
Identity = 48/155 (30.97%), Postives = 67/155 (43.23%), Query Frame = 0
Query:  106 AGVGMTDAS---DSFVRLLQSHPSEFLRSYGHILSPADLDDL-VPSLDPEVVLHVRRLQALMSRQRDMMNDSSHDHFCTGALAESKLATAATVLGESGGPYRERRGERHSRPPGGARIRNRRYKRLHQLAEGGVWFSDEAMKERDPWLWHEFVGR 256
            +G    DAS    + + LL    S FL  YG  L+ A+L +      D EV  H+ R++   S               T   A S+ AT                            ++NRR   L QL +GGV+FS+EAM+ER+P+L HE+VGR
Sbjct:   58 SGEAPPDASLRKTALLDLLSRDASLFLERYGTDLTAAELSEFDALKQDYEVCWHLDRIRRSRSP--------------TAEEARSRSAT----------------------------VKNRRRAYLEQLVQGGVYFSEEAMREREPYLHHEYVGR 170          
BLAST of mRNA_H-elongata_contig8429.16043.1 vs. uniprot
Match: A0A850XI52_PIACA (CCD97 protein (Fragment) n=1 Tax=Piaya cayana TaxID=33601 RepID=A0A850XI52_PIACA)

HSP 1 Score: 54.3 bits (129), Expect = 4.030e-5
Identity = 25/53 (47.17%), Postives = 35/53 (66.04%), Query Frame = 0
Query:  209 RHSRPPGGARIRNRRYKRLHQLAEGGVWFSDEAMKERDPWLWHEFVGRQAGEE 261
            R  R P   R+RNRRY  L +L + G +FS+EAM+ R+P L+H ++GR  G E
Sbjct:   57 RPRRSPARTRLRNRRYAALRRLIQEGDYFSEEAMRAREPLLYHHYIGRYRGAE 109          
BLAST of mRNA_H-elongata_contig8429.16043.1 vs. uniprot
Match: A0A2P4Y249_9STRA (DUF2052 domain-containing protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4Y249_9STRA)

HSP 1 Score: 54.7 bits (130), Expect = 8.990e-5
Identity = 25/49 (51.02%), Postives = 38/49 (77.55%), Query Frame = 0
Query:  467 REAVVRILWERFLDGEE-EGVNYADVDGDERLDDLDQIARDEEDRWFGG 514
            R+ ++ ++  RFL+GE+ E VNY ++DG+E LDDLD++ RD EDR+F G
Sbjct:  173 RQQLIEVMSTRFLNGEDSEYVNYMEIDGNEALDDLDEMQRDAEDRYFSG 221          
BLAST of mRNA_H-elongata_contig8429.16043.1 vs. uniprot
Match: A0A077RZY4_WHEAT (DUF2052 domain-containing protein n=1 Tax=Triticum aestivum TaxID=4565 RepID=A0A077RZY4_WHEAT)

HSP 1 Score: 53.9 bits (128), Expect = 9.880e-5
Identity = 24/43 (55.81%), Postives = 33/43 (76.74%), Query Frame = 0
Query:  214 PGGARIRNRRYKRLHQLAEGGVWFSDEAMKERDPWLWHEFVGR 256
            P  AR+RNRR   LH+L   G +FS+EAM+ER+P+L HE++GR
Sbjct:   70 PAPARVRNRRRAYLHRLVTQGDYFSEEAMREREPYLHHEYLGR 112          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig8429.16043.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
D7FM87_ECTSI1.210e-6935.78Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
F2TWH5_SALR52.890e-637.50DUF2052 domain-containing protein n=1 Tax=Salpingo... [more]
A0A0D9WLK8_9ORYZ1.020e-529.45DUF2052 domain-containing protein n=1 Tax=Leersia ... [more]
A0A1D1YCT0_9ARAE3.000e-530.97Coiled-coil domain-containing protein 97 (Fragment... [more]
A0A850XI52_PIACA4.030e-547.17CCD97 protein (Fragment) n=1 Tax=Piaya cayana TaxI... [more]
A0A2P4Y249_9STRA8.990e-551.02DUF2052 domain-containing protein n=1 Tax=Phytopht... [more]
A0A077RZY4_WHEAT9.880e-555.81DUF2052 domain-containing protein n=1 Tax=Triticum... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR040233Domain of unknown function DUF2052PFAMPF09747DUF2052coord: 221..512
e-value: 7.6E-28
score: 98.0
IPR018613Ccdc97-likePANTHERPTHR31840FAMILY NOT NAMEDcoord: 118..518

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig8429contigH-elongata_contig8429:1886..5908 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig8429.16043.1mRNA_H-elongata_contig8429.16043.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig8429 1654..6075 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig8429.16043.1 ID=prot_H-elongata_contig8429.16043.1|Name=mRNA_H-elongata_contig8429.16043.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=522bp
MSKTESGTEVIEEDELSVDPLDAFMASIDSEIMQQAALAAASAKPPSSTG
IIVPIPAALPRPFDTQPAPAQLAAAKKVANSPFIVALQRRKGKKIGNGDH
QGSREAGVGMTDASDSFVRLLQSHPSEFLRSYGHILSPADLDDLVPSLDP
EVVLHVRRLQALMSRQRDMMNDSSHDHFCTGALAESKLATAATVLGESGG
PYRERRGERHSRPPGGARIRNRRYKRLHQLAEGGVWFSDEAMKERDPWLW
HEFVGRQAGEEKPAPRDAVDRIPGSTSMGTYLKESLTFLSQPQVGNWPSE
TSVRATTRERGSSLSLTFFSRLATGPIRVEQGEQLPEDTRPPEGSALTAD
EEAMDDEAEEKLEPGDIPDSSQVTPSAGARSLPGDASSGGDTGVTAAFRV
RDNAEAGTRGTGRDARSDVVDDDRRITFADGIGGGGRDQNAPDTVGMQVE
AEERDSEEEAGDGETGREAVVRILWERFLDGEEEGVNYADVDGDERLDDL
DQIARDEEDRWFGGQEDDPTD*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR040233DUF2052
IPR018613Ccdc97-like