prot_H-elongata_contig8424.16039.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig8424.16039.1
Unique Nameprot_H-elongata_contig8424.16039.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length335
Homology
BLAST of mRNA_H-elongata_contig8424.16039.1 vs. uniprot
Match: A0A6H5KR67_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR67_9PHAE)

HSP 1 Score: 119 bits (297), Expect = 7.050e-26
Identity = 67/153 (43.79%), Postives = 90/153 (58.82%), Query Frame = 0
Query:  183 NGGRLSYTGPTKFVLNSATKSGGVLGSGAFSAISNYEESLFFVRGPTSFENNTAGGNGGGIALLGMLNVEFEATEVTFYGNTADVAGGAIFISGTGVAPILSDMTFTSNSAKVGGAVYAVASGVELTEGNANPTTFARCSFVGNKAVTTGGAV 335
            NG  +S TG TK V N A   GG +GS A  ++ + E+S   + GPT+F NNT+G NGG +ALLG L++     E +F  N+AD+AGG +++S T + P  SD+ F SN A VGGA+               PTTF+RC F  N+   TGGAV
Sbjct:  289 NGSYVSSTGDTKVVRNGALVDGGAVGSVASDSVLSPEDSTLSIDGPTAFVNNTSGENGGALALLGELSISVNTEESSFVDNSADLAGGTVYVSDTAIGPTFSDVIFDSNFAHVGGALL--------------PTTFSRCRFTYNRETATGGAV 427          
BLAST of mRNA_H-elongata_contig8424.16039.1 vs. uniprot
Match: D7G301_ECTSI (Polymorphic Outer membrane protein G/I family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G301_ECTSI)

HSP 1 Score: 117 bits (292), Expect = 3.600e-25
Identity = 71/137 (51.82%), Postives = 88/137 (64.23%), Query Frame = 0
Query:  204 GGVLGSGAFSAISNYEESLFFVRGPTSFENNTAGGNGGGIALLGMLNVEFEATEVTFYGNTADVAGGAIFISGTGVAPILSDMTFTSNSAKVGGAVYAVASGVELTEGNA-----NPTTFARCSFVGNKAVTTGGAV 335
            GGV+GS +  ++SN + S   + G T+F NNT G NGG +ALLG L V      V+F GN A+VAGGA+F+SGTG  PI +   F SNSA+VGGAV  V SG  L E NA     NPTTF  C F+ N+A  TGGA+
Sbjct:  537 GGVIGSFSTDSVSN-QGSTLVMNGTTAFVNNTCGANGGALALLGGLAVNIGTENVSFIGNAAEVAGGAVFVSGTGFGPIFTGARFISNSAQVGGAVSTVGSG-NLKE-NADISPPNPTTFDHCHFIDNRATATGGAI 670          
BLAST of mRNA_H-elongata_contig8424.16039.1 vs. uniprot
Match: D7FHG7_ECTSI (LNR domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHG7_ECTSI)

HSP 1 Score: 114 bits (285), Expect = 3.350e-24
Identity = 64/133 (48.12%), Postives = 87/133 (65.41%), Query Frame = 0
Query:  207 LGSGAFSAISNYEESLFFVRGPTSFENNTAGGNGGGIALLGMLNVEFEATEVTFYGNTADVAGGAIFISGTGVAPILSDMTFTSNSAKVGGAVYAVASGVELTEGNAN----PTTFARCSFVGNKAVTTGGAV 335
            +GS A  ++ + E+S   + GPT+F NNT+G NGG +ALLG L++     E  F  N+AD+AGGA+++S T + P  SD+ F SNSA+VGGAV A+ SG    +G  N    PTTF+RC F  N+A  TGGAV
Sbjct: 2216 VGSVASDSVLSPEDSTLSIDGPTAFVNNTSGENGGALALLGGLSISVNTEETNFVDNSADLAGGAVYVSDTAIGPTFSDVIFDSNSAQVGGAVSALGSG--NVKGGENDQLLPTTFSRCRFTFNRATATGGAV 2346          
BLAST of mRNA_H-elongata_contig8424.16039.1 vs. uniprot
Match: D7FHH1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHH1_ECTSI)

HSP 1 Score: 111 bits (277), Expect = 3.110e-23
Identity = 62/133 (46.62%), Postives = 88/133 (66.17%), Query Frame = 0
Query:  207 LGSGAFSAISNYEESLFFVRGPTSFENNTAGGNGGGIALLGMLNVEFEATEVTFYGNTADVAGGAIFISGTGVAPILSDMTFTSNSAKVGGAVYAVASGVELTEGNAN----PTTFARCSFVGNKAVTTGGAV 335
            +GS A  ++ + E+S   + GPT+F NNT+G NGG +ALLG L++     E +F  N+A++AGGA+++S T + P  SD+ F SNSA+VGGAV ++ SG    +G  N    PTTF+RC F  N+A  TGGAV
Sbjct:  303 VGSVASDSVLSPEDSTLSIDGPTAFVNNTSGENGGALALLGGLSISVNTGETSFVDNSANLAGGAVYVSDTAIGPTFSDVIFDSNSAQVGGAVSSLGSG--NVKGGENDQLLPTTFSRCRFTFNRATATGGAV 433          
BLAST of mRNA_H-elongata_contig8424.16039.1 vs. uniprot
Match: D7G2X5_ECTSI (Adhesin-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2X5_ECTSI)

HSP 1 Score: 101 bits (252), Expect = 6.050e-20
Identity = 70/210 (33.33%), Postives = 106/210 (50.48%), Query Frame = 0
Query:  158 SSVYWSQAAS--FTGNQAYRGGVLYIHNGGRLSYTGPTKFVLNSATK---------------------------SGGVLGSGAFSAISNYEESLFFVRGPTSFENNTAGGNGGGIALLGMLNVEFEATEVTFYGNTADVAGGAIFISGTGVAPILSDMTFTSNSAKVGGAVYAVASGVELTEGNANP---TTFARCSFVGNKAVTTGGAV 335
            S++YWS   +    G+ ++ GG LY+ +G  ++++G T+                                    GG + S ++ +  N  ES   + G T+F NNT G NGG +AL    +++    +V+F GN+A  AGGA+F+SG G+ P  SD++F SN A+VGGA     SG +   G  +P   T F RC F+ N A T+GGAV
Sbjct:  633 STIYWSGGLTRFIGGSSSFVGGALYV-SGSEVTWSGGTEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGGAMMSPSYDSEYNPLESSLVINGTTTFFNNTCGENGGSLALFDACSLDINTADVSFTGNSAGFAGGAVFVSGAGIGPTFSDVSFISNFAQVGGAASVFGSGND--RGMLSPIIPTKFDRCRFIDNVATTSGGAV 839          
BLAST of mRNA_H-elongata_contig8424.16039.1 vs. uniprot
Match: A0A6H5K1P8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1P8_9PHAE)

HSP 1 Score: 100 bits (250), Expect = 1.090e-19
Identity = 76/192 (39.58%), Postives = 103/192 (53.65%), Query Frame = 0
Query:  156 VGSSVYWSQAASFTGNQAY---------RGGVLYIHNGGRLSYTGPTKFVLNSA-TKSGGVLGSGAFSAISNYEESLFFVRGPTSFENNTAGGNGGGIALL--GMLNVEFEATEVTFYGNTADVAGGAIFISGTGVAPILSDMTFTSNSAKVGGAVYAVASGVELTEGNANPTTFARCSFVGNKAVTTGGAV 335
            + S + W+  A F GN A           GG   + +   +S+TG T F  N A ++ GG+  S A   I     S   +   T F NNTA  NG  I L     LN  F   +++F GN+A VAGGAIF+SG    PI +++ FTSN A++GGAV +   G+E + G  NPTTF RC FV N+  +TGGA+
Sbjct:  575 IDSYISWAGTAEFNGNSALSLVNSTLGEEGGAASVLSC-NVSWTGETIFTSNVAQSEGGGITASSANDGIL----SNITMNATTIFFNNTAATNGRAIVLFEDAALNSIFNM-DISFVGNSAGVAGGAIFLSGVDTGPIFTEVNFTSNVAEIGGAVSSFRCGIEPS-GVDNPTTFDRCRFVDNQGASTGGAI 759          
BLAST of mRNA_H-elongata_contig8424.16039.1 vs. uniprot
Match: A0A6H5K3R8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3R8_9PHAE)

HSP 1 Score: 98.6 bits (244), Expect = 5.490e-19
Identity = 65/180 (36.11%), Postives = 88/180 (48.89%), Query Frame = 0
Query:  158 SSVYWSQAASFTGNQAYRGGVLYIHNGGRLSYTGPTKFVLNSATKSGGVLGSGAFSAISNYEESLFFVRGPTSFENNTAGGNGGGIALLGMLNVEFEATEVTFYGNTADVAGGAIFISGTGVAPILSDMTFTSNSAKVGGAVYAVASGVELTEGNANP--TTFARCSFVGNKAVTTGGAV 335
            S V WS A  F  N A  G  +++ NG  + +TG T F  N A+  GGV+ S              FV  P +  N           LLG L+V        F GNTA VAGGA+F+S T + P   +++  SN A+VGGA+  + SG      +  P  TTF +C F+ N+A+ TGG V
Sbjct:   18 SQVAWSAATEFEDNTALSGRAMFLWNGSHVEWTGDTDFSSNKASADGGVVWS--------------FVLTPFTTLNTP---------LLGGLSVAIGTENAVFVGNTAAVAGGAVFVSSTAIGPTFVNVSLISNWAQVGGAISLIGSGTSFNPEDYTPAPTTFDQCRFLSNRAIATGGTV 174          
BLAST of mRNA_H-elongata_contig8424.16039.1 vs. uniprot
Match: D7FTL7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTL7_ECTSI)

HSP 1 Score: 91.7 bits (226), Expect = 1.350e-16
Identity = 55/128 (42.97%), Postives = 71/128 (55.47%), Query Frame = 0
Query:  214 AISNYEESLFFVRGPTSFENNTAGGNGGGIALLGMLNVEFEATEVTFYGNTADVAGGAIFISGTGVAPILSDMTFTSNSAKVGGAVYAVASG-------VELTEGNANPTTFARCSFVGNKAVTTGGA 334
            ++ N   S   + GPT+F NNT GG+GGG+A    L+V+ +   VTF GN A+VAGGA+F+SG GV  +               AV  V SG       +E      +PTTF RCSFVGN+A  TGGA
Sbjct:  516 SVYNLRSSTLLINGPTAFVNNTCGGSGGGLAAFDGLSVDIDTAGVTFSGNAAEVAGGAVFVSGAGVGFVFXXXXXXXXXXXXXXAVSIVGSGNLKGFFDLEWP----SPTTFDRCSFVGNQASATGGA 639          
BLAST of mRNA_H-elongata_contig8424.16039.1 vs. uniprot
Match: D7G2Z8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2Z8_ECTSI)

HSP 1 Score: 87.8 bits (216), Expect = 2.500e-15
Identity = 54/134 (40.30%), Postives = 71/134 (52.99%), Query Frame = 0
Query:  204 GGVLGSGAFSAISNYEESLFFVRGPTSFENNTAGGNGGGIALLGMLNVEFEATEVTFYGNTADVAGGAIFISGTGVAPILSDMTFTSNSAKVGGAVYAVASGVELTEGNANP--TTFARCSFVGNKAVTTGGAV 335
            GGV+GS    ++ N + S   V                 +ALLG L+V        F GNTA VAGGAIF+SGT V P   +++  SNSA+VGGA+  + SG      +  P  TTF +C F  N+A+ TGGAV
Sbjct:  257 GGVVGSFVLDSLYNPQGSYLIVXXXXXXXXXXXXXXXXALALLGGLSVTIGTENTVFVGNTAAVAGGAIFVSGTAVGPTFVNISLVSNSAQVGGAISLIGSGTSFNPEDYTPAPTTFEQCRFTSNRAIATGGAV 390          
BLAST of mRNA_H-elongata_contig8424.16039.1 vs. uniprot
Match: D7G5Y7_ECTSI (Polymorphic Outer membrane protein G/I family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5Y7_ECTSI)

HSP 1 Score: 87.8 bits (216), Expect = 2.860e-15
Identity = 55/97 (56.70%), Postives = 66/97 (68.04%), Query Frame = 0
Query:  243 IALLGM-LNVEFEATEVTFYGNTADVAGGAIFISGTGVAPILSDMTFTSNSAKVGGAVYAVASG-VELTEGNA--NPTTFARCSFVGNKAVTTGGAV 335
            +ALLG  L+VEF A  V F  NTA VAGGA+F+SG  V P+LSD+ F +N A+VGGAV  V SG ++   G A  NPT F RC FV N+A  TGGAV
Sbjct: 1383 LALLGGGLHVEFGAAGVVFSNNTAAVAGGAVFVSGADVGPVLSDVLFEANVAQVGGAVSTVGSGNLKEYAGLAPPNPTIFTRCRFVNNQAAATGGAV 1479          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig8424.16039.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 12
Match NameE-valueIdentityDescription
A0A6H5KR67_9PHAE7.050e-2643.79Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G301_ECTSI3.600e-2551.82Polymorphic Outer membrane protein G/I family n=1 ... [more]
D7FHG7_ECTSI3.350e-2448.12LNR domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FHH1_ECTSI3.110e-2346.62Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G2X5_ECTSI6.050e-2033.33Adhesin-like protein n=1 Tax=Ectocarpus siliculosu... [more]
A0A6H5K1P8_9PHAE1.090e-1939.58Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K3R8_9PHAE5.490e-1936.11Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FTL7_ECTSI1.350e-1642.97Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D7G2Z8_ECTSI2.500e-1540.30Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G5Y7_ECTSI2.860e-1556.70Polymorphic Outer membrane protein G/I family n=1 ... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003368Polymorphic outer membrane protein repeatTIGRFAMTIGR01376TIGR01376coord: 226..244
e-value: 9.5E-5
score: 20.1
coord: 52..75
e-value: 3.2E-5
score: 21.6
coord: 107..130
e-value: 0.0027
score: 15.5
IPR003368Polymorphic outer membrane protein repeatPFAMPF02415Chlam_PMPcoord: 257..274
e-value: 0.012
score: 16.0
coord: 286..301
e-value: 0.081
score: 13.4
coord: 229..243
e-value: 0.089
score: 13.3
NoneNo IPR availablePANTHERPTHR19862FAMILY NOT NAMEDcoord: 10..277

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig8424contigH-elongata_contig8424:8511..9515 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig8424.16039.1mRNA_H-elongata_contig8424.16039.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig8424 8511..9515 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig8424.16039.1 ID=prot_H-elongata_contig8424.16039.1|Name=mRNA_H-elongata_contig8424.16039.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=335bp
MSISYGFGIAGGAIAASGASLTFDDTAFIGNSALIGGALFVSEDSVGIFY
NETSFVENNATSSGGALYVSKNCSLYWSGKSTFIGNNASVYGGALYTYEN
SAVSFDANVSFSNNIAGNSGGAMHVAGNASVAMNGVANFDANKADTTGGG
ISVIDVGSSVYWSQAASFTGNQAYRGGVLYIHNGGRLSYTGPTKFVLNSA
TKSGGVLGSGAFSAISNYEESLFFVRGPTSFENNTAGGNGGGIALLGMLN
VEFEATEVTFYGNTADVAGGAIFISGTGVAPILSDMTFTSNSAKVGGAVY
AVASGVELTEGNANPTTFARCSFVGNKAVTTGGAV
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003368POMP_repeat