prot_H-elongata_contig83261.15965.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig83261.15965.1
Unique Nameprot_H-elongata_contig83261.15965.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length46
Homology
BLAST of mRNA_H-elongata_contig83261.15965.1 vs. uniprot
Match: D8LGG3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGG3_ECTSI)

HSP 1 Score: 58.9 bits (141), Expect = 7.630e-10
Identity = 30/39 (76.92%), Postives = 35/39 (89.74%), Query Frame = 0
Query:    2 EKSYLFEDRLETAKRLRQLGNEQFSRGRMKDAAETYQRS 40
            EKSYLFE+RLETA RLRQLGNE+F RG M+DAAE Y+R+
Sbjct:   21 EKSYLFEERLETAGRLRQLGNERFKRGCMEDAAEAYERA 59          
BLAST of mRNA_H-elongata_contig83261.15965.1 vs. uniprot
Match: A0A6H5K9H3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9H3_9PHAE)

HSP 1 Score: 59.3 bits (142), Expect = 3.510e-9
Identity = 30/39 (76.92%), Postives = 35/39 (89.74%), Query Frame = 0
Query:    2 EKSYLFEDRLETAKRLRQLGNEQFSRGRMKDAAETYQRS 40
            EKSYLFE+RLETA RLRQLGNE+F RGRM+ AAE Y+R+
Sbjct:   21 EKSYLFEERLETAGRLRQLGNERFKRGRMEGAAEAYERA 59          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig83261.15965.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LGG3_ECTSI7.630e-1076.92Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K9H3_9PHAE3.510e-976.92Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 1..41
e-value: 2.6E-5
score: 26.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig83261contigH-elongata_contig83261:2597..2734 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig83261.15965.1mRNA_H-elongata_contig83261.15965.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig83261 2597..2734 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig83261.15965.1 ID=prot_H-elongata_contig83261.15965.1|Name=mRNA_H-elongata_contig83261.15965.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=46bp
QEKSYLFEDRLETAKRLRQLGNEQFSRGRMKDAAETYQRSAFPPR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf