prot_H-elongata_contig81926.15860.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig81926.15860.1
Unique Nameprot_H-elongata_contig81926.15860.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length410
Homology
BLAST of mRNA_H-elongata_contig81926.15860.1 vs. uniprot
Match: D7G7A0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7A0_ECTSI)

HSP 1 Score: 117 bits (292), Expect = 6.470e-25
Identity = 86/164 (52.44%), Postives = 98/164 (59.76%), Query Frame = 0
Query:  207 GADEFSDFQGATGDK---------------SGGITNGRPASAAIGITNPKWRDVSSLVDLGGLSSNTDKKVAQQKQEEQTFQSNNNSFAGLDGFHS-KPQGMGAVRPPAATVSTGLSGGVLSXXXXXXGVSGFQQQQQQHQA----MQGGWMGA-QYGMGIPSG 349
            G ++FSDFQG++                  +G  TNG        +TNPKWRDVSSLVDLGGLSSNTDKKVA+QK  EQTFQSNNNSFAGLDGF + +PQGMG  RP +    TGLSGG  +      G+ G QQ           MQGGWMGA Q GMG   G
Sbjct:  309 GNEDFSDFQGSSSXXXXXXXXXXXXXXXXXTGAATNGA-------VTNPKWRDVSSLVDLGGLSSNTDKKVAEQKVVEQTFQSNNNSFAGLDGFKAPQPQGMGMNRPLSGM--TGLSGGAGTGMMMGGGM-GVQQPXXXXXXXXXXMQGGWMGAPQQGMGGAGG 462          
BLAST of mRNA_H-elongata_contig81926.15860.1 vs. uniprot
Match: A0A6H5JZR7_9PHAE (ENTH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZR7_9PHAE)

HSP 1 Score: 82.0 bits (201), Expect = 3.790e-13
Identity = 89/235 (37.87%), Postives = 99/235 (42.13%), Query Frame = 0
Query:   51 ASFPDLLGGDLLTPAPAPAVA----AGGQLENLFATPAVIAPANGAVGGGGGMDSFDPRGGGSAVPAVGVPAPTAAA-------------GGFGHEFVGFATAPVASAAPVAVRVNVSGCAFGHAADPFAATPAPVLSGRGVSGVSXXXGSNFLGMTNTVGLTAAAAASSSNGGADEFSDFQGATGDKSGGITNGRPASAAIG------ITNPKWRDVSSLVDLGGLSSNTDKKV 262
            A  PDLLGGD LT  PAP       AGG   ++FA     APANG   G G  D FDPRG                              G FG +F GF+  P A   P+                PFA                XXX        N  G   A A S+ N   ++FSDFQG +G   GG      AS   G      +TNPKWRDVSSLVDLGGLSSNTDKKV
Sbjct:  340 APVPDLLGGDFLTSDPAPTAXXXXXAGGGFGDMFAA----APANGXXSGSG-FDGFDPRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVFGQDFSGFSAVPAAGQ-PLGAXXXXXXXXXXX--XPFAXXXXXXXXXXXXXXXXXXXXXXXFSGNNGNGAVHARAPSTGN---EDFSDFQGCSGAPGGGGETTGAASGGTGAATNGAVTNPKWRDVSSLVDLGGLSSNTDKKV 563          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig81926.15860.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G7A0_ECTSI6.470e-2552.44Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JZR7_9PHAE3.790e-1337.87ENTH domain-containing protein n=1 Tax=Ectocarpus ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig81926contigH-elongata_contig81926:569..2619 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig81926.15860.1mRNA_H-elongata_contig81926.15860.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig81926 569..2619 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig81926.15860.1 ID=prot_H-elongata_contig81926.15860.1|Name=mRNA_H-elongata_contig81926.15860.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=410bp
KTSTQSKRERKKTSGSKLAIKIKDKNASASASSSAAAPAPAEIPAAAATP
ASFPDLLGGDLLTPAPAPAVAAGGQLENLFATPAVIAPANGAVGGGGGMD
SFDPRGGGSAVPAVGVPAPTAAAGGFGHEFVGFATAPVASAAPVAVRVNV
SGCAFGHAADPFAATPAPVLSGRGVSGVSGVSGSNFLGMTNTVGLTAAAA
ASSSNGGADEFSDFQGATGDKSGGITNGRPASAAIGITNPKWRDVSSLVD
LGGLSSNTDKKVAQQKQEEQTFQSNNNSFAGLDGFHSKPQGMGAVRPPAA
TVSTGLSGGVLSGGAMAGGVSGFQQQQQQHQAMQGGWMGAQYGMGIPSGQ
VPQQQQQQQFFGGQGMGIGMGMGMSMGMQQGGGSMMGNKRGLQAGGATAG
AGGTVMPGGL
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