prot_H-elongata_contig81432.15809.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig81432.15809.1
Unique Nameprot_H-elongata_contig81432.15809.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length378
Homology
BLAST of mRNA_H-elongata_contig81432.15809.1 vs. uniprot
Match: A0A6H5KL37_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KL37_9PHAE)

HSP 1 Score: 225 bits (573), Expect = 7.420e-63
Identity = 174/489 (35.58%), Postives = 229/489 (46.83%), Query Frame = 0
Query:    2 GRRIVRWRAGKGGEYTGEEFRQYCLETGIIQEFAATNTTQQIDVSERVGRTLRAMVRCMLADGSFPSSMWGGLFMTAAYLKNRTPPKALKIKTPFKMLHGEEPELSHLRVIGSRTSVHIKD-SRKLETAASEGKVCGYSEESKSYRVWNPKTRRVVESRNVIFIEAPPHLLPPPSQLSPSQDLVPPSWNLDDDTLDNDYISYDDLLRDVRDYTSVLDFTANSPAH--------------HENATHA------------PAPTRRGTAIRNSR--------------------------------IPWPNVVR--QRAAAKPTG--------------------------------------------AVTCYRGVR--------PNNNSNNNHAALAERFQQRICMMLAIAVELNYEVHMLDMQTAFLNANVEEEVFVKMAPGYETNDKSGVPLVMKLKKSLHGLRQSPKQWFGMMDVELAVIGFRPLK 377
            G RI   R  +G E+T  EFRQYC + GI  EFA+ N  QQI  +ER GRT+  +VRC+LAD + P+ +WG L  TA YL NR P  AL+  TP+K L+G++  L HLRVIGSR  VH +  +RKLE  A EG++ GYS +SKSYR++N +TRRV  SRNV+FIE PP        ++P+ D     +  DD      Y ++DD++RDVR+YT      +  P H              HE                  AP   G  IR  R                                   P+V R  + A A P G                                            A   ++G          P  +  N +A +  RFQ  I M+  IAV+ N E+  +D+ TAFL A++ E VFV+  PG+E  DK G  LVM+L+KSL+GL QSP  WF  +D  L  IGF PLK
Sbjct:  163 GERIHCLRGDQGTEFTSAEFRQYCQDIGIKLEFASPNIPQQIGANERAGRTILNVVRCLLADSTLPNFLWGELIQTAVYLSNRVPHAALQNGTPYKALYGKDAYLGHLRVIGSRAFVHEETHTRKLEHRAWEGRLVGYSMDSKSYRIYNSETRRVRVSRNVVFIETPP--------VAPALD----EFGFDDREFT--YDTHDDMVRDVRNYTFNHSIDSLPPDHDVGDIPVIELLEQIHETTNRDLGVSSAGTPPTDDAPRTSGETIRELRRISYAFTAKGEFPDVAHRDGSFGFTEHAYAMGASQPDVPRTIEEARAMPDGEQWNAAAEREIASLKERQVYKLVPRTAVPPGRKRIKSKWVFKRKAGGSFKGRLVAQGWNQVPGLDCGNTYAPVC-RFQS-IRMLACIAVQFNLELDQMDVSTAFLYADILENVFVEQPPGFEVKDKDGGDLVMQLQKSLYGLAQSPSNWFHTIDPFLVEIGFVPLK 635          
BLAST of mRNA_H-elongata_contig81432.15809.1 vs. uniprot
Match: A0A6H5J8P7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8P7_9PHAE)

HSP 1 Score: 216 bits (550), Expect = 6.090e-59
Identity = 150/381 (39.37%), Postives = 205/381 (53.81%), Query Frame = 0
Query:    2 GRRIVRWRAGKGGEYTGEEFRQYCLETGIIQEFAATNTTQQIDVSERVGRTLRAMVRCMLADGSFPSSMWGGLFMTAAYLKNRTPPKALKIKTPFKMLHGEEPELSHLRVIGSRTSVHIKDSRK-LETAASEGKVCGYSEESKSYRVWNPKTRRVVESRNVIFIEAPPHLLPPPSQLSPS---QDLVPPSWNLDD--DTLDNDYISYDDLLRDVRD-YTSVLDFTANSPAHHENATHAP-APTRRGTAIRNSRIPWPNVVRQRAAAKPTGAVTCYRGVRPNNNSNNNHAALAERFQQRICMMLAIAVELNYEVHMLDMQTAFLNANVEEEVFVKMAPGYET-NDKSGVPLVMKLKKSLHGLRQSPKQWFGMMDVELAVIGF 373
            G RI   R  KGGE  G EFR YC  + I  E+AATNT QQI VSER G+TL  + RC+L DG FP SMWG L +TAAYL NR+   AL   TP+  LH + P+LS LRVIG+R  VH +  RK L+  A EGK+CG+  +S++Y V NP  R VVESRNV FIE PP  +P       +    D++  +  LD    T D D+   ++LLR  R+ +        N+   H      P +   +G  I  ++  +   +  R  A+    V       P  +   ++A +      R  M  AI    N+ ++ LD+  AFLNA  + +V+V+ APG    N  +G P+V KL++SL+GL QSP  W   +D  L V G+
Sbjct:  506 GYRIETIRCDKGGENAGSEFRNYCKNSAIKLEYAATNTPQQIGVSERDGQTLAGVTRCLLKDGDFPPSMWGELMLTAAYLLNRSSHSALGGATPYSKLHNQSPDLSGLRVIGARAFVHHERYRKKLDDRAFEGKLCGFGLDSQTYWVLNPSNRAVVESRNVTFIEFPPRSVPFQYSTEANGYESDVLRFTSLLDSPHSTSDLDFTPQNELLRQEREIWKGACSKEMNNLRKHNVYNLVPLSSVPKGEKILGTKFVFKKKLDGRFKAR---LVVGGHRQEPGQDYGRSYAPVCRIGSIR--MTCAIGCHNNWPIYQLDVVGAFLNALCDRDVYVRPAPGTSAKNSATGEPMVYKLERSLYGLSQSPALWNDTLDESLTVFGW 881          
BLAST of mRNA_H-elongata_contig81432.15809.1 vs. uniprot
Match: A0A6H5KCZ9_9PHAE (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCZ9_9PHAE)

HSP 1 Score: 206 bits (524), Expect = 3.780e-57
Identity = 145/416 (34.86%), Postives = 211/416 (50.72%), Query Frame = 0
Query:    2 GRRIVRWRAGKGGEYTGEEFRQYCLETGIIQEFAATNTTQQIDVSERVGRTLRAMVRCMLADGSFPSSMWGGLFMTAAYLKNRTPPKALKIKTPFKMLHGEEPELSHLRVIGSRTSVHIKDSR-KLETAASEGKVCGYSEESKSYRVWNPKTRRVVESRNVIFIE----APPHLLPPPSQLSPSQDLVPPSWNLDDDTLDNDYI---------------------SYDDLLR--DVRDYTSVLDFTANSPAHHENATHAPAPTRRGTAIRNSRIPWPNVVRQRAAAKPTGAVTCYR----------------GVRPNNNSNNNHAALAERFQQRICMMLAIAVELNYEVHMLDMQTAFLNANVEEEVFVKMAPGYETNDK-SGVPLVMKLKKSLHGLRQSPKQWFGMMDVELAVIG 372
            G R+ R R+  GGEYT E +R +C   GI+QEF A  T QQ  +SER GRTL  +VRC++  G  P  +WG L  T  ++ NR P   L  +TP+  + G++  L HLRVIGS   VH++  + KL   A  G + GYS +S++YRV+NP+T+R+V SRNV FIE    A P ++P P++L    +      ++  D   + YI                     +Y + +R  D   + + +D    S   H+ A   P            R+P          AKP G+   Y+                G R   +    +  ++ RF  ++  M AIA E  Y+V  +D+ TAFL + VEEEV+V+ A GYE  D+ +G+PLVMKLKKSL+GL+QSP+ +       +  IG
Sbjct:  106 GFRLERLRSDNGGEYTSEYYRDFCKTIGIVQEFTAPATPQQNGISERAGRTLMNIVRCLMHGGKLPEFLWGELCCTTVHITNRLPHVHLNNETPYYRMFGKQASLRHLRVIGSTAFVHLETYKSKLANRAWPGILIGYSPDSRAYRVFNPRTKRIVHSRNVTFIEPMDAAMPPVIPTPAELRNDTEN---ELSVSSDVNQDQYIRIKTPSAGEPVRPPACIPIPTTYQEAMRSMDADQWKAAMDKEIRSLKDHDVADLVPV----------QRLP--------PGAKPIGSRWLYKMKATGVMKARLIVQGWGQRHGIDCGGTYGPVS-RFSSQLVFM-AIAAERGYDVETMDVVTAFLQSKVEEEVYVRQAKGYEITDEVTGLPLVMKLKKSLYGLKQSPRNFGNAFAKGIKEIG 498          
BLAST of mRNA_H-elongata_contig81432.15809.1 vs. uniprot
Match: A0A6H5JYB5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYB5_9PHAE)

HSP 1 Score: 193 bits (490), Expect = 7.730e-51
Identity = 110/226 (48.67%), Postives = 142/226 (62.83%), Query Frame = 0
Query:    4 RIVRWRAGKGGEYTGEEFRQYCLETGIIQEFAATNTTQQIDVSERVGRTLRAMVRCMLADGSFPSSMWGGLFMTAAYLKNRTPPKALKIKTPFKMLHGEEPELSHLRVIGSRTSVHIKD-SRKLETAASEGKVCGYSEESKSYRVWNPKTRRVVESRNVIFIEAPPHLLPPPSQLSPSQDLVPPSWNLDDDTLDND---YISYDDLLRDVRDYTSVLDFTANSPAH 225
            RI   RAGKG E+T   +RQYCL+ GI  +FA+ NT  QI  +ER GRT+  +VRCMLAD + PS +WG L  TA YL NRTP  AL   TP+K L G +  L HLRV+G+R  VH +  ++KL++ A EG++ GYS +SKSYR++N +TRRV ESRNVIFIE  P                PPS  LD+   D+    Y  +DD++RDVR+YT+     A SP H
Sbjct:  601 RIHVLRAGKGAEFTNAAYRQYCLDVGIQLQFASPNTPHQIGANERAGRTIMNIVRCMLADSTLPSLLWGELMQTAVYLSNRTPHAALHNGTPYKALFGTDAHLGHLRVVGARAFVHEETHTKKLDSRAWEGRLVGYSLDSKSYRIYNAQTRRVRESRNVIFIETNP---------------APPS--LDERGFDDGEFTYADHDDMIRDVRNYTTNHSVDALSPTH 809          
BLAST of mRNA_H-elongata_contig81432.15809.1 vs. uniprot
Match: A0A6H5KF63_9PHAE (Integrase catalytic domain-containing protein (Fragment) n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF63_9PHAE)

HSP 1 Score: 182 bits (463), Expect = 1.370e-50
Identity = 106/222 (47.75%), Postives = 138/222 (62.16%), Query Frame = 0
Query:    2 GRRIVRWRAGKGGEYTGEEFRQYCLETGIIQEFAATNTTQQIDVSERVGRTLRAMVRCMLADGSFPSSMWGGLFMTAAYLKNRTPPKALKIKTPFKMLHGEEPELSHLRVIGSRTSVHIKDSRK-LETAASEGKVCGYSEESKSYRVWNPKTRRVVESRNVIFIEAPPHLLPPPSQLSPSQDLVPPSWNLDDDTLDNDYISYDDLLRDVRDYTSVLDFTANS 222
            G +I   R  KGGE TG +FR YC  + I  E+AATNT QQI VSER G+TL  + RC+L DG FP SMWG + +TAAYL NR+P  AL   TP+  LH + P+LS LRVIG+R  VH +  RK L+  A EGK+CG+  +S++YRV +P    VVESRNV FIE+PP               VP  ++ + +  ++D +S+  LL D    TS LDFTA +
Sbjct:  119 GYQIETIRCDKGGENTGSDFRDYCKNSAIKLEYAATNTPQQIGVSERDGQTLAGVTRCLLKDGDFPPSMWGEIMLTAAYLLNRSPHSALGGATPYSKLHNKSPDLSGLRVIGARAFVHHERYRKKLDDRAFEGKLCGFGLDSQTYRVLDPSNGAVVESRNVTFIESPPR-------------SVPFQYSTEANGYESDVLSFTSLL-DSPHSTSDLDFTAQN 326          
BLAST of mRNA_H-elongata_contig81432.15809.1 vs. uniprot
Match: A0A6H5KLG0_9PHAE (Integrase catalytic domain-containing protein (Fragment) n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLG0_9PHAE)

HSP 1 Score: 188 bits (478), Expect = 1.670e-50
Identity = 109/222 (49.10%), Postives = 138/222 (62.16%), Query Frame = 0
Query:    2 GRRIVRWRAGKGGEYTGEEFRQYCLETGIIQEFAATNTTQQIDVSERVGRTLRAMVRCMLADGSFPSSMWGGLFMTAAYLKNRTPPKALKIKTPFKMLHGEEPELSHLRVIGSRTSVHIKDSRK-LETAASEGKVCGYSEESKSYRVWNPKTRRVVESRNVIFIEAPPHLLPPPSQLSPSQDLVPPSWNLDDDTLDNDYISYDDLLRDVRDYTSVLDFTANS 222
            G RI   R  KGGE TG EFR YC  +    E+AATNTTQQI VSER G+TL  + RC+L DG FP SMWG L +TAAYL NR+P  AL   TP+  LH + P+LS LRVIG+R  VH +  RK L+  A EGK+CG+  +S++YRV NP    VVESRNV FIE+PP               VP  ++ + +  ++D +S+  L+ D    TS LDFTA +
Sbjct:   56 GYRIETIRCDKGGENTGSEFRDYCKNSATKLEYAATNTTQQIGVSERDGQTLAGVTRCLLKDGDFPPSMWGELMLTAAYLLNRSPHSALGGATPYSKLHNKSPDLSGLRVIGARAFVHHERYRKKLDDRAFEGKLCGFGLDSQTYRVLNPSNGAVVESRNVTFIESPPR-------------SVPVQYSTEANGYESDVLSFTSLM-DSPHSTSDLDFTAQN 263          
BLAST of mRNA_H-elongata_contig81432.15809.1 vs. uniprot
Match: A0A6H5KQ40_9PHAE (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQ40_9PHAE)

HSP 1 Score: 177 bits (449), Expect = 3.340e-50
Identity = 106/222 (47.75%), Postives = 135/222 (60.81%), Query Frame = 0
Query:    2 GRRIVRWRAGKGGEYTGEEFRQYCLETGIIQEFAATNTTQQIDVSERVGRTLRAMVRCMLADGSFPSSMWGGLFMTAAYLKNRTPPKALKIKTPFKMLHGEEPELSHLRVIGSRTSVHIKDSRK-LETAASEGKVCGYSEESKSYRVWNPKTRRVVESRNVIFIEAPPHLLPPPSQLSPSQDLVPPSWNLDDDTLDNDYISYDDLLRDVRDYTSVLDFTANS 222
            G RI   R  KGGE TG EFR YC  + I  E+AATNT QQI  SER G+TL  + RC+L DG FP SMW  L +TAAYL NR+P  AL   TP+  LH + P+LS LRVIG+R  VH +  RK L+  A EGK+CG+  +S++YRV NP    VVESRN+ FIE+ P               VP  ++ + +  ++D +S+  LL D    TS LDFTA +
Sbjct:    8 GYRIETIRCDKGGENTGSEFRDYCKNSAIKLEYAATNTPQQIGESERDGQTLAGVTRCLLKDGDFPPSMWWQLMLTAAYLFNRSPHSALGGATPYSKLHNKSPDLSGLRVIGARAFVHHERYRKKLDDRAFEGKLCGFGLDSQTYRVLNPSNGAVVESRNLTFIESLPR-------------SVPFQYSTEANGYESDVLSFTSLL-DSPHSTSDLDFTAQN 215          
BLAST of mRNA_H-elongata_contig81432.15809.1 vs. uniprot
Match: A0A6H5KIP3_9PHAE (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIP3_9PHAE)

HSP 1 Score: 188 bits (478), Expect = 3.640e-50
Identity = 150/422 (35.55%), Postives = 206/422 (48.82%), Query Frame = 0
Query:    2 GRRIVRWRAGKGGEYTGEEFRQYCLETGIIQEFAATNTTQQIDVSERVGRTLRAMVRCMLADGSFPSSMWGGLFMTAAYLKNRTPPKALKIKTPFKMLHGEEPELSHLRVIGSRTSVHIK--DSRKLETAASEGKVCGYSEESKSYRVWNPKTRRVVESRNVIFIEAPPHLLPP---PSQLSPSQD------LVPPSWNLDDDTLDNDYISYDDLL--------------RDVRDYTSVLD----FTANSPAHHENA-THAPAPTRRGTAIRN--------SRIPWPNVVRQRA---AAKPTGAVTCYRGVRPNNN------SNNNHAALAERFQQRICMMLAIAVELNYEVHMLD---MQTAFLNANVEEEVFVKMAPGYETNDKS-GVPLVMKLKKSLHGLRQSPKQWFGMMDVELAVIG 372
            G RI   R  KGGE TGEE R YC E+ I  EFAATNT Q+I VSER G+TL A+ R +L DG FP  +WG L MTAAYL NRTP  AL   TP+  ++   P+LS LR IG+R  VH +  + +KL+    E K+CGY  +SK+YR++     +V ESRNV FIE PP+ +PP     +L   QD      L+    +  D+    DY +  +LL               ++R   + +D    F A     + N  T  P+ T + T + +        S  P P  +R+     AA P  + T      P  N        +N A L  R        L+      +         +   FLNA  + +V+V+ APG E  D + G  +V KL+KSL+GL QSP  W   ++  L + G
Sbjct:  277 GYRIEVLRCDKGGENTGEEMRNYCRESAIKLEFAATNTPQEIGVSERDGQTLAAVTRALLRDGDFPKHIWGELMMTAAYLTNRTPHAALGGATPYSKMYNTTPDLSRLRAIGARAFVHHERYNKKKLDYRTFEDKLCGYGSDSKTYRIYVEGKDKVYESRNVTFIETPPNTIPPHRWDDRLGYEQDVMNFTSLLGRRTSTGDEDNKVDYGTQSELLLHEMRNMQQDNISRAELRQNNAGMDSDNYFAAGGADSNNNPRTTTPSRTSQDTTLESPTTPTDTDSASPAPISMRRLTVTRAALPWLSATPTHWSSPRINYSISPIKRSNDALLTRRILLTWMKTLSPKSPYAFATGTSSKGFLGETFLNAYTDRDVYVRPAPGDEERDPTTGEMMVYKLEKSLYGLSQSPSLWNDAINDRLIIFG 698          
BLAST of mRNA_H-elongata_contig81432.15809.1 vs. uniprot
Match: A0A6H5KJN3_9PHAE (Gag-Pol-p199 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJN3_9PHAE)

HSP 1 Score: 190 bits (482), Expect = 8.830e-50
Identity = 109/226 (48.23%), Postives = 141/226 (62.39%), Query Frame = 0
Query:    4 RIVRWRAGKGGEYTGEEFRQYCLETGIIQEFAATNTTQQIDVSERVGRTLRAMVRCMLADGSFPSSMWGGLFMTAAYLKNRTPPKALKIKTPFKMLHGEEPELSHLRVIGSRTSVHIKD-SRKLETAASEGKVCGYSEESKSYRVWNPKTRRVVESRNVIFIEAPPHLLPPPSQLSPSQDLVPPSWNLDDDTLDND---YISYDDLLRDVRDYTSVLDFTANSPAH 225
            RI   RA KG E+T   +RQYCL+ GI  +FA+ NT  QI  +ER GRT+  +VRCMLAD + PS +WG L  TA YL NRTP  AL   TP+K L G +  L HLRV+G+R  VH +  ++KL++ A EG++ GYS +SKSYR++N +TRRV ESRNVIFIE  P                PPS  LD+   D+    Y  +DD++RDVR+YT+     A SP H
Sbjct:  695 RIHVLRADKGTEFTNAAYRQYCLDVGIQLQFASPNTPHQIGANERAGRTIMNIVRCMLADSTLPSLLWGELMQTAVYLSNRTPHAALHNGTPYKALFGTDAHLGHLRVVGARAFVHEETHTKKLDSRAWEGRLVGYSLDSKSYRIYNAQTRRVRESRNVIFIETTP---------------APPS--LDERGFDDGEFTYADHDDMIRDVRNYTTNHSVDALSPTH 903          
BLAST of mRNA_H-elongata_contig81432.15809.1 vs. uniprot
Match: A0A6H5J842_9PHAE (Gag-Pol-p199 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J842_9PHAE)

HSP 1 Score: 189 bits (481), Expect = 1.370e-49
Identity = 109/226 (48.23%), Postives = 141/226 (62.39%), Query Frame = 0
Query:    4 RIVRWRAGKGGEYTGEEFRQYCLETGIIQEFAATNTTQQIDVSERVGRTLRAMVRCMLADGSFPSSMWGGLFMTAAYLKNRTPPKALKIKTPFKMLHGEEPELSHLRVIGSRTSVHIKD-SRKLETAASEGKVCGYSEESKSYRVWNPKTRRVVESRNVIFIEAPPHLLPPPSQLSPSQDLVPPSWNLDDDTLDND---YISYDDLLRDVRDYTSVLDFTANSPAH 225
            RI   RA KG E+T   +RQYCL+ GI  +FA+ NT  QI  +ER GRT+  +VRCMLAD + PS +WG L  TA YL NRTP  AL   TP+K L G +  L HLRV+G+R  VH +  ++KL++ A EG++ GYS +SKSYR++N +TRRV ESRNVIFIE  P                PPS  LD+   D+    Y  +DD++RDVR+YT+     A SP H
Sbjct:  924 RIHVLRADKGTEFTNAAYRQYCLDVGIQLQFASPNTPHQIGANERAGRTIMNIVRCMLADSTLPSLLWGELMQTAVYLSNRTPHAALHNGTPYKALFGTDAHLGHLRVVGARAFVHEETHTKKLDSRAWEGRLVGYSLDSKSYRIYNAQTRRVRESRNVIFIETTP---------------APPS--LDERGFDDGEFTYADHDDMIRDVRNYTTNHPVDALSPTH 1132          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig81432.15809.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KL37_9PHAE7.420e-6335.58Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5J8P7_9PHAE6.090e-5939.37Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KCZ9_9PHAE3.780e-5734.86Integrase catalytic domain-containing protein (Fra... [more]
A0A6H5JYB5_9PHAE7.730e-5148.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KF63_9PHAE1.370e-5047.75Integrase catalytic domain-containing protein (Fra... [more]
A0A6H5KLG0_9PHAE1.670e-5049.10Integrase catalytic domain-containing protein (Fra... [more]
A0A6H5KQ40_9PHAE3.340e-5047.75Integrase catalytic domain-containing protein (Fra... [more]
A0A6H5KIP3_9PHAE3.640e-5035.55Integrase catalytic domain-containing protein (Fra... [more]
A0A6H5KJN3_9PHAE8.830e-5048.23Gag-Pol-p199 n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
A0A6H5J842_9PHAE1.370e-4948.23Gag-Pol-p199 n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 291..375
e-value: 1.3E-18
score: 67.5
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 7..133
e-value: 2.1E-12
score: 48.6
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 12..165
NoneNo IPR availablePANTHERPTHR11439:SF265coord: 12..165
IPR001584Integrase, catalytic corePROSITEPS50994INTEGRASEcoord: 1..103
score: 10.591
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 5..111

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig81432contigH-elongata_contig81432:7..1389 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig81432.15809.1mRNA_H-elongata_contig81432.15809.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig81432 7..1389 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig81432.15809.1 ID=prot_H-elongata_contig81432.15809.1|Name=mRNA_H-elongata_contig81432.15809.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=378bp
LGRRIVRWRAGKGGEYTGEEFRQYCLETGIIQEFAATNTTQQIDVSERVG
RTLRAMVRCMLADGSFPSSMWGGLFMTAAYLKNRTPPKALKIKTPFKMLH
GEEPELSHLRVIGSRTSVHIKDSRKLETAASEGKVCGYSEESKSYRVWNP
KTRRVVESRNVIFIEAPPHLLPPPSQLSPSQDLVPPSWNLDDDTLDNDYI
SYDDLLRDVRDYTSVLDFTANSPAHHENATHAPAPTRRGTAIRNSRIPWP
NVVRQRAAAKPTGAVTCYRGVRPNNNSNNNHAALAERFQQRICMMLAIAV
ELNYEVHMLDMQTAFLNANVEEEVFVKMAPGYETNDKSGVPLVMKLKKSL
HGLRQSPKQWFGMMDVELAVIGFRPLK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2
IPR036397RNaseH_sf
IPR039537Retrotran_Ty1/copia-like
IPR001584Integrase_cat-core
IPR012337RNaseH-like_sf