prot_H-elongata_contig8128.15787.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig8128.15787.1
Unique Nameprot_H-elongata_contig8128.15787.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length748
Homology
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BLAST of mRNA_H-elongata_contig8128.15787.1 vs. uniprot
Match: D7FT47_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FT47_ECTSI)

HSP 1 Score: 534 bits (1375), Expect = 8.570e-176
Identity = 372/787 (47.27%), Postives = 468/787 (59.47%), Query Frame = 0 
Query:    1 MGAYEAQLRLLEGRSDEGALDMISAALLNQASALIRLRKFGEAEARCTRLLASAGSTGGDGGFGDVQAR--ALHFRGFARLRQGLFKGACSDLKSTLAAGDQRGEEARALLAEAEAGAAFSSCRDPEAKXXXXXXXXXXXXXXXXXXXXXXXARRRYYCRNAQPKSGSERGGSEAGS--ALGRNLRMEGIAVSASGDPLAAEMLLRGGLKELRSLGVDVDATLRKRLV-EEEGLMLSALGTMLGQQRKHQEAVGFMREAVDRLEDAIARPLTRQNAEGYKSNNDSTNL---PPLPSTMTTGAGDLPLQLARTLACLGSELLKLQ----SRSGGGGKSHSC-------PGSRQAANAQQS----------------DDSRLGLTTSVDEIVRVLERALLLIKAEAAEVSKSSGAEGAVANVGGVDGGGDCLRGEVGERDYVRHQAATVLDSLSEAYARGKRWEKARSAAEQAVTAWRSLDEPLRAGAAVSLLALGHILLQLHGVGAVLDEASARWEEAVACVNDFT-RPLEAADVRLKVAGYYTAVARADPARLESLEVKIAGHYMAAAGLFCRARKEEERALEHPNGIGPAAVTMRIAVGSSAGPAHNNPDYLPPPLHSH-------RWILKLDLAGREALSLKEYAVAVGDDHDKAVKALSKASELLDLSSATQWNESWTLRKVGVLQDLALALAKSGEYAMSEGKLIDAIAEQEKLDDAKA-----AHRETLTNLYKYLAIARRARGDMPGAKKALDRVESLGGSAGLEEVEGLNRLLGRNRITM 739
            + AY+AQLR+LEGR DE A++M   ALLNQAS  I L+KF EAEARC+RLLASA   GG   +G  +AR  ALHFRGFAR R GLF GACSDL+S+LAAG   G+EARALL EAEAGAA SSC DPEA+                       ARRR      +  +G+E G     +  AL RNLR+EGIAV+ +GDP +AEMLLR  L++LR  G             EEEGL L+ALG++L Q+ KH +A+  +REAV  L++AIA      N  G  +++  TN    PP PS        L   L  TLA LG+ LL  +    +  G  G S +        PG  +    + +                D    G +   DE + VL+RA  ++KAE   ++ +   +      GG+ G    +    GE D VR Q A VLD+LSEAY R KRWE+AR AAEQ++TAWRSL    R GAA SLL+LGH+LLQLHGVGA  +EASARWEEA  C      RP   A+VRLK+AGYYT VAR+DPARLESLE KI+ HY  AA LF R R E+  +L+       AA   R      +G A   P  LPPPL          RW    +LA +EA + + YA A G+DH+ AV AL+KA +LLD +S +  +E WTLRKVGVL  LALALA+SGE+AM+E KL++AI E ++LD   +      H+ TLT+LYKYLAI RRARGD  GAK AL +VE+LGG  G EE+EGLNRLL  + +++
Sbjct:   68 IAAYDAQLRVLEGRKDEAAVEMTCGALLNQASGFISLKKFKEAEARCSRLLASATPRGGTKAYGGAEARTRALHFRGFARFRLGLFDGACSDLRSSLAAGTSSGDEARALLLEAEAGAAMSSCPDPEAEGREHLRQGRGREAAKSFRDAASRARRR------KDAAGAEAGEGAVATTVALSRNLRLEGIAVAMAGDPPSAEMLLRTALRDLRVGGXXXXXXXXXXXXXEEEGLTLAALGSLLAQRGKHADALEPLREAVAVLDEAIAG--VSANEGGVANSSAGTNARSSPPTPSITEGRITALTRTLTGTLAFLGTSLLAPEVQPSANYGSNGSSTTTTSSGGVTPGVMKGGAEKVTVPAPGFSCDDKGPIVADSGEAGSSKEADEAIDVLKRAHEMLKAETVAMATAGPGQ-----KGGLAGVYSAVGESRGEAD-VRKQTAKVLDTLSEAYGREKRWERARLAAEQSLTAWRSLGVAGRVGAAASLLSLGHLLLQLHGVGAGFEEASARWEEAATCFKGCAERPSVEAEVRLKIAGYYTKVARSDPARLESLEGKISAHYSEAAVLFARERDEKTSSLKRAAEAVAAAQAPRDKTAEGSGSAEPVPP-LPPPLVDSLEPDGRSRW----ELAEQEAFAWEGYAGAAGEDHEAAVTALAKAEKLLDHASVSDKDERWTLRKVGVLHSLALALARSGEHAMAENKLLEAIRELQQLDGVDSIAEACVHKGTLTDLYKYLAIVRRARGDFAGAKAALAKVETLGGCEGSEELEGLNRLLAESAVSV 835
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig8128.15787.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FT47_ECTSI8.570e-17647.27Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 3..264
e-value: 3.2E-8
score: 34.9
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 367..550
e-value: 6.7E-7
score: 30.7
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 25..446

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig8128contigH-elongata_contig8128:667..7457 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig8128.15787.1mRNA_H-elongata_contig8128.15787.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig8128 607..8700 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig8128.15787.1 ID=prot_H-elongata_contig8128.15787.1|Name=mRNA_H-elongata_contig8128.15787.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=748bp
MGAYEAQLRLLEGRSDEGALDMISAALLNQASALIRLRKFGEAEARCTRL
LASAGSTGGDGGFGDVQARALHFRGFARLRQGLFKGACSDLKSTLAAGDQ
RGEEARALLAEAEAGAAFSSCRDPEAKARALLRENQAAEAAKYFRDAASR
ARRRYYCRNAQPKSGSERGGSEAGSALGRNLRMEGIAVSASGDPLAAEML
LRGGLKELRSLGVDVDATLRKRLVEEEGLMLSALGTMLGQQRKHQEAVGF
MREAVDRLEDAIARPLTRQNAEGYKSNNDSTNLPPLPSTMTTGAGDLPLQ
LARTLACLGSELLKLQSRSGGGGKSHSCPGSRQAANAQQSDDSRLGLTTS
VDEIVRVLERALLLIKAEAAEVSKSSGAEGAVANVGGVDGGGDCLRGEVG
ERDYVRHQAATVLDSLSEAYARGKRWEKARSAAEQAVTAWRSLDEPLRAG
AAVSLLALGHILLQLHGVGAVLDEASARWEEAVACVNDFTRPLEAADVRL
KVAGYYTAVARADPARLESLEVKIAGHYMAAAGLFCRARKEEERALEHPN
GIGPAAVTMRIAVGSSAGPAHNNPDYLPPPLHSHRWILKLDLAGREALSL
KEYAVAVGDDHDKAVKALSKASELLDLSSATQWNESWTLRKVGVLQDLAL
ALAKSGEYAMSEGKLIDAIAEQEKLDDAKAAHRETLTNLYKYLAIARRAR
GDMPGAKKALDRVESLGGSAGLEEVEGLNRLLGRNRITMDVSASSGE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf