prot_H-elongata_contig8121.15777.1 (polypeptide) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig8121.15777.1 vs. uniprot
Match: A0A6A3GCN4_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A6A3GCN4_9STRA) HSP 1 Score: 118 bits (296), Expect = 4.150e-29 Identity = 71/167 (42.51%), Postives = 97/167 (58.08%), Query Frame = 0
Query: 1 MGCHITRNCKARELKIDQHLYVESMVEKFDVKKGSKI--PATSGVPTFSKADEPRIPEEKEEMRKFPYREAVGALMWTVTMTRPDIASAVRAVARFCENLGPAHTKVVMKIMHYLLHTKDWGISYGGQ-GCELCMEAYTNLDFGACLDTRRSVSGAMLMLAKGAISW 164
+G I + + R L I Q Y ES+++KF + P GV +KADEP+ E+K +M+ PYR VG+LM+ TRPDI+ AV ++RF EN G H +K++HYLL TKD GI Y G G +L EAY++ D+ D RRSVSG +LML + W
Sbjct: 82 LGIEIDYDMERRTLGISQKAYTESIIKKFGQENAKPYLTPLEPGV-QLTKADEPQTEEDKAKMKSKPYRSLVGSLMYLACGTRPDISVAVAKLSRFLENPGEKHWDAGIKVVHYLLKTKDVGIVYDGLLGTQL--EAYSDADWAGNRDDRRSVSGMLLMLCGAPVVW 245
BLAST of mRNA_H-elongata_contig8121.15777.1 vs. uniprot
Match: A0A438BR63_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=3 Tax=Vitis vinifera TaxID=29760 RepID=A0A438BR63_VITVI) HSP 1 Score: 116 bits (291), Expect = 1.450e-28 Identity = 62/166 (37.35%), Postives = 101/166 (60.84%), Query Frame = 0
Query: 1 MGCHITRNCKARELKIDQHLYVESMVEKFDVKKGSK--IPATSGVPTFSKADEPRIPEEKEEMRKFPYREAVGALMWTVTMTRPDIASAVRAVARFCENLGPAHTKVVMKIMHYLLHTKDWGISYGGQGCELCMEAYTNLDFGACLDTRRSVSGAMLMLAKGAISW 164
+G I R+ R L + Q +Y+++++++++++ + +P +GV T S+ D P+ PEE+E M + PY AVGA+M+T+T TRPD+ A+ +R+ N G H KVV I+ YL TKD + YG EL ++ YT+ F + D +S+SG + L GA+SW
Sbjct: 24 LGIKIYRDRSKRLLGLSQSMYIDTILKRYNMENSKRGYLPIGTGV-TLSREDCPKTPEERERMNRVPYASAVGAIMYTMTCTRPDVTYALSVASRYQANPGEEHWKVVKTILKYLRRTKDQFLIYGES--ELKLKGYTDASFASDKDDSKSISGYVFTLNGGAVSW 186
BLAST of mRNA_H-elongata_contig8121.15777.1 vs. uniprot
Match: A0A6H5KR24_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR24_9PHAE) HSP 1 Score: 116 bits (290), Expect = 2.630e-28 Identity = 65/165 (39.39%), Postives = 95/165 (57.58%), Query Frame = 0
Query: 2 GCHITRNCKARELKIDQHLYVESMVEKFDVKKGSKIPATSGVPTFSKADEPRIPEEKEEMRKFPYREAVGALMWTVTMTRPDIASAVRAVARFCENLGPAHTKVVMKIMHYLLHTKDWGISYG-GQGCELCMEAYTNLDFGACLDTRRSVSGAMLMLAKGAISWY 165
GC R+ A LKI Q Y E + +F V+ G +IP G+ S+ D + EE+ +P+RE +G+LMW T TRPDIA+AVRAVAR+C + H + + I+ Y++ T D GI++ G L ME + + D+ + RRSVSG ++M G ISW+
Sbjct: 59 GCFYERDWDAGTLKISQQTYAEELGMEFGVEYGKEIPLPVGM-KLSEFD------QDEEVVSWPFRELIGSLMWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDSGITFRRGSIAGLSMEVFADADYASKAADRRSVSGGLVMCGGGCISWF 216
BLAST of mRNA_H-elongata_contig8121.15777.1 vs. uniprot
Match: A0A6A4F359_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A4F359_9STRA) HSP 1 Score: 117 bits (292), Expect = 4.420e-28 Identity = 71/167 (42.51%), Postives = 98/167 (58.68%), Query Frame = 0
Query: 1 MGCHITRNCKARELKIDQHLYVESMVEKFDVK--KGSKIPATSGVPTFSKADEPRIPEEKEEMRKFPYREAVGALMWTVTMTRPDIASAVRAVARFCENLGPAHTKVVMKIMHYLLHTKDWGISYGGQ-GCELCMEAYTNLDFGACLDTRRSVSGAMLMLAKGAISW 164
+G I + + R L I Q Y ES+++KF + K P GV +KADEP+I E+K +M+ PYR VG+LM+ TRPDI+ AV ++RF EN G H +K++ YLL TKD GI Y G G +L EAY++ D+ D RRSVSG +LM+ + W
Sbjct: 114 LGIEIDYDMERRTLGISQKAYTESIIKKFGQENAKPCLTPLEPGV-QLTKADEPQIEEDKAKMKSKPYRSLVGSLMYLACGTRPDISVAVAKLSRFLENPGEKHWDAGIKVVRYLLKTKDVGIVYDGLLGTQL--EAYSDADWAGNRDDRRSVSGMLLMMCGAPVVW 277
BLAST of mRNA_H-elongata_contig8121.15777.1 vs. uniprot
Match: A0A6H5JLN0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLN0_9PHAE) HSP 1 Score: 117 bits (292), Expect = 6.700e-28 Identity = 65/165 (39.39%), Postives = 95/165 (57.58%), Query Frame = 0
Query: 2 GCHITRNCKARELKIDQHLYVESMVEKFDVKKGSKIPATSGVPTFSKADEPRIPEEKEEMRKFPYREAVGALMWTVTMTRPDIASAVRAVARFCENLGPAHTKVVMKIMHYLLHTKDWGISYG-GQGCELCMEAYTNLDFGACLDTRRSVSGAMLMLAKGAISWY 165
GC R+ A LKI Q Y E + +F V+ G +IP G+ S+ D + EE+ +P+RE +G+LMW T TRPDIA+AVRAVAR+C + H + + I+ Y++ T D GI++ G L ME + + D+ + RRSVSG ++M G ISW+
Sbjct: 160 GCFYERDWDAGTLKISQQTYAEELGMEFGVEYGKEIPLPVGL-KLSEFD------QDEEVVSWPFRELIGSLMWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDLGITFRRGSVAGLSMEVFVDADYASKAADRRSVSGGLVMCGGGCISWF 317
BLAST of mRNA_H-elongata_contig8121.15777.1 vs. uniprot
Match: A0A6A3HKX1_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3HKX1_9STRA) HSP 1 Score: 115 bits (287), Expect = 6.730e-28 Identity = 71/167 (42.51%), Postives = 97/167 (58.08%), Query Frame = 0
Query: 1 MGCHITRNCKARELKIDQHLYVESMVEKFDVK--KGSKIPATSGVPTFSKADEPRIPEEKEEMRKFPYREAVGALMWTVTMTRPDIASAVRAVARFCENLGPAHTKVVMKIMHYLLHTKDWGISYGGQ-GCELCMEAYTNLDFGACLDTRRSVSGAMLMLAKGAISW 164
+G I + + R L I Q Y ES+++KF + K P GV +KADEP+ E K +M+ PYR VG+LM+ TRPDI+ AV ++RF EN G H +K++ YLL TKD GI Y G G +L EAY++ D+ D RRSVSG +LML ++ W
Sbjct: 34 VGIEIDYDMERRTLGISQKAYTESIIKKFGQENAKPCLTPLEPGV-QLTKADEPQTEEVKAKMKSKPYRSLVGSLMYLACGTRPDISVAVAKLSRFLENSGEKHWDAGIKVVRYLLKTKDVGIVYDGLLGTQL--EAYSDADWAGNRDDRRSVSGMLLMLCGASVVW 197
BLAST of mRNA_H-elongata_contig8121.15777.1 vs. uniprot
Match: A0A6A3PU23_9STRA (Uncharacterized protein n=1 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3PU23_9STRA) HSP 1 Score: 111 bits (278), Expect = 9.920e-28 Identity = 68/156 (43.59%), Postives = 91/156 (58.33%), Query Frame = 0
Query: 12 RELKIDQHLYVESMVEKFDVK--KGSKIPATSGVPTFSKADEPRIPEEKEEMRKFPYREAVGALMWTVTMTRPDIASAVRAVARFCENLGPAHTKVVMKIMHYLLHTKDWGISYGGQ-GCELCMEAYTNLDFGACLDTRRSVSGAMLMLAKGAISW 164
R L I Q Y ES+++KF + K P GV +KADEP+ E+K +M+ PYR VG+LM+ TRPDI+ AV ++RF EN G H +K++ YLL TKD GI Y G G +L EAY++ D+ D R SVSG +LML + W
Sbjct: 4 RTLGISQKAYTESIIKKFGQENAKPCLTPLEPGV-QLTKADEPQTEEDKAKMKSKPYRSLVGSLMYLACGTRPDISVAVAKLSRFLENPGEKHWDAGIKVVRYLLKTKDVGIVYDGLLGTQL--EAYSDADWAGNRDDRHSVSGTLLMLCDAPVMW 156
BLAST of mRNA_H-elongata_contig8121.15777.1 vs. uniprot
Match: A0A438K5H3_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=3 Tax=Vitis vinifera TaxID=29760 RepID=A0A438K5H3_VITVI) HSP 1 Score: 118 bits (295), Expect = 1.040e-27 Identity = 63/166 (37.95%), Postives = 102/166 (61.45%), Query Frame = 0
Query: 1 MGCHITRNCKARELKIDQHLYVESMVEKFDVKKGSK--IPATSGVPTFSKADEPRIPEEKEEMRKFPYREAVGALMWTVTMTRPDIASAVRAVARFCENLGPAHTKVVMKIMHYLLHTKDWGISYGGQGCELCMEAYTNLDFGACLDTRRSVSGAMLMLAKGAISW 164
+G I R+ R L + Q +Y+++++++++++ + +P +GV T S+ D P+ PEE+E M + PY AVGA+M+T+T TRPD+A A+ +R+ N G H KVV I+ YL TKD + YG EL ++ YT+ F + D +S+SG + L GA+SW
Sbjct: 543 LGIKIYRDRSKRLLGLSQSMYIDTILKRYNMENSKRGYLPIGTGV-TLSREDCPKTPEERERMNRVPYASAVGAIMYTMTCTRPDVAYALSVASRYQANPGEEHWKVVKTILKYLRRTKDQFLIYGES--ELKLKGYTDASFASDKDDSKSISGYVFTLNGGAVSW 705
BLAST of mRNA_H-elongata_contig8121.15777.1 vs. uniprot
Match: A0A6A3GJM7_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=2 Tax=Phytophthora TaxID=4783 RepID=A0A6A3GJM7_9STRA) HSP 1 Score: 116 bits (291), Expect = 1.480e-27 Identity = 70/167 (41.92%), Postives = 96/167 (57.49%), Query Frame = 0
Query: 1 MGCHITRNCKARELKIDQHLYVESMVEKFDVKKGSKI--PATSGVPTFSKADEPRIPEEKEEMRKFPYREAVGALMWTVTMTRPDIASAVRAVARFCENLGPAHTKVVMKIMHYLLHTKDWGISYGGQ-GCELCMEAYTNLDFGACLDTRRSVSGAMLMLAKGAISW 164
+G I + + R L I Q Y ES+++KF + P GV +KADEP+ E+K +M+ PYR VG+LM+ TRPDI+ AV ++RF E G H +K++HYLL TKD GI Y G G +L EAY++ D+ D RRSVSG +LML + W
Sbjct: 298 LGIEIDYDMERRTLGISQRAYTESIIKKFGQENAKPYLTPLEPGV-QLTKADEPQTEEDKAKMKSKPYRSLVGSLMYLACGTRPDISVAVAKLSRFLEKPGEKHWDAGIKVVHYLLKTKDVGIVYDGLLGTQL--EAYSDADWAGNRDDRRSVSGILLMLCGAPVVW 461
BLAST of mRNA_H-elongata_contig8121.15777.1 vs. uniprot
Match: A0A6H5L0Z9_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0Z9_9PHAE) HSP 1 Score: 115 bits (289), Expect = 1.750e-27 Identity = 64/165 (38.79%), Postives = 95/165 (57.58%), Query Frame = 0
Query: 2 GCHITRNCKARELKIDQHLYVESMVEKFDVKKGSKIPATSGVPTFSKADEPRIPEEKEEMRKFPYREAVGALMWTVTMTRPDIASAVRAVARFCENLGPAHTKVVMKIMHYLLHTKDWGISYG-GQGCELCMEAYTNLDFGACLDTRRSVSGAMLMLAKGAISWY 165
GC R+ A LKI Q Y E + +F V+ G +IP G+ S+ D + EE+ +P+RE +G+LMW T TRPDIA+AVRAVAR+C + H + + I+ Y++ T + GI++ G L ME + + D+ + RRSVSG ++M G ISW+
Sbjct: 101 GCFYERDWDAGTLKISQQTYAEELGMEFGVEYGKEIPLPVGL-KLSEFD------QDEEVVSWPFRELIGSLMWLATQTRPDIANAVRAVARYCASPKEIHCRAGLGILGYVVRTSELGITFRRGSVAGLSMEVFADADYASKAADRRSVSGGLVMCGGGCISWF 258 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig8121.15777.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-elongata_contig8121.15777.1 ID=prot_H-elongata_contig8121.15777.1|Name=mRNA_H-elongata_contig8121.15777.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=166bpback to top |