prot_H-elongata_contig81165.15772.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig81165.15772.1
Unique Nameprot_H-elongata_contig81165.15772.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length156
Homology
BLAST of mRNA_H-elongata_contig81165.15772.1 vs. uniprot
Match: A0A401GYH9_9APHY (Uncharacterized protein n=6 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GYH9_9APHY)

HSP 1 Score: 131 bits (329), Expect = 2.060e-32
Identity = 63/155 (40.65%), Postives = 96/155 (61.94%), Query Frame = 0
Query:    1 MGEAQASSEWPQWKRAIAHEMDGQTTRGVWQVVERPKGKTVLGTRVVFKRKIDKDGRIEKYKCRLVAQGFRQVKGIHYEEYSSPTPAQASIRMVLSMIAALGWEAWQLDVDMAYLEADVEEEIYVELPEAYRDSRKQVGLLRKAMYGLVHARLLW 155
            + EAQAS EWP+W++A+  E D     G W++ + PK +  +G + VF+RK +K+G++ KYK RLVAQG+ Q+ G+ + E  +P     SIR +L++     WE  Q+DV  AYL  D++EEIY+  PE + D   ++  LRK +YGL  +   W
Sbjct:  910 LAEAQASPEWPEWEKAVKAEYDQLQGMGTWELQDLPKDRNAVGCKWVFQRKTNKEGQVVKYKARLVAQGYSQIPGMDFLETFAPVVRLESIRAILALAVVNNWEIGQMDVKGAYLNGDLQEEIYMRQPEGFDDGSGRICRLRKTLYGLKQSGREW 1064          
BLAST of mRNA_H-elongata_contig81165.15772.1 vs. uniprot
Match: A0A401GN13_9APHY (Uncharacterized protein n=1 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GN13_9APHY)

HSP 1 Score: 128 bits (321), Expect = 2.460e-31
Identity = 67/150 (44.67%), Postives = 94/150 (62.67%), Query Frame = 0
Query:    1 MGEAQASSEWPQWKRAIAHEMDGQTTRGVWQVVERPKGKTVLGTRVVFKRKIDKDGRIEKYKCRLVAQGFRQVKGIHYEEYSSPTPAQASIRMVLSMIAALGWEAWQLDVDMAYLEADVEEEIYVELPEAYRDSRKQ--VGLLRKAMYGL 148
            + EA  S+EWP+WK AIA EM    + G + +VE PK   ++G++ VF+ K + +G IE YK RLVAQGF QV GI + E  +P    ASIR++L++ A   WE  Q+DV  AYL  D+EEEIY+  P    +  K+  V  L++ +YGL
Sbjct:  925 LNEAMQSTEWPKWKEAIAKEMQNLDSHGTYTLVEPPKNTNIVGSKFVFRIKHNAEGEIESYKARLVAQGFTQVPGIDFNETFAPVAKLASIRLILALAARYDWELHQMDVKGAYLNGDLEEEIYMRQPPGQAEPGKEHLVCRLKRPLYGL 1074          
BLAST of mRNA_H-elongata_contig81165.15772.1 vs. uniprot
Match: A0A151RGT1_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Cajanus cajan TaxID=3821 RepID=A0A151RGT1_CAJCA)

HSP 1 Score: 121 bits (304), Expect = 3.520e-31
Identity = 57/145 (39.31%), Postives = 92/145 (63.45%), Query Frame = 0
Query:   13 WKRAIAHEMDGQTTRGVWQVVERPKGKTVLGTRVVFKRKIDKDGRIEKYKCRLVAQGFRQVKGIHYEEYSSPTPAQASIRMVLSMIAALGWEAWQLDVDMAYLEADVEEEIYVELPEAYR--DSRKQVGLLRKAMYGLVHARLLW 155
            W +A+  EM+       W++V++P+ K  +G R +F  K   DG IE+YK RLVA+G+ Q  GI Y+E  +P     ++R+VL++ A  GW+  QLDV  A+L  ++EEE+Y+E+P+ ++  + R +V LL+KA+YGL  +   W
Sbjct:    6 WTQAMKEEMNALERNSTWEIVDKPRDKKAIGCRWIFTVKHKADGTIERYKARLVAKGYTQTYGIDYKETFAPVAKMNTVRVVLALTAHFGWDLHQLDVKSAFLHGNLEEEVYMEIPQGFKVQNERNKVCLLKKALYGLTQSLRAW 150          
BLAST of mRNA_H-elongata_contig81165.15772.1 vs. uniprot
Match: A0A177U0B1_9BASI (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Tilletia caries TaxID=13290 RepID=A0A177U0B1_9BASI)

HSP 1 Score: 125 bits (315), Expect = 7.210e-31
Identity = 62/149 (41.61%), Postives = 92/149 (61.74%), Query Frame = 0
Query:    7 SSEWPQWKRAIAHEMDGQTTRGVWQVVERPKGKTVLGTRVVFKRKIDKDGRIEKYKCRLVAQGFRQVKGIHYEEYSSPTPAQASIRMVLSMIAALGWEAWQLDVDMAYLEADVEEEIYVELPEAYRDSRKQVGLLRKAMYGLVHARLLW 155
            S+EW QWK+A+  E+   T  G W +VE   G  ++G+R V+K K+D+DG   +YK RLVAQGF Q +GI ++E  +P     ++R+V+S+  ALG     +D+  AYL   + EE+Y++ P  Y D   +V LLR+A+YGL  A   W
Sbjct:   34 SAEWAQWKQAMDEEVASLTEMGTWVLVEPRSGHNIVGSRWVYKLKLDRDGNAARYKARLVAQGFTQREGIDFKETFAPVARLVTVRLVISVALALGLHLGSIDIKTAYLNGKLHEEVYMQQPPEYDDGTGRVCLLRRAIYGLKQAGRAW 182          
BLAST of mRNA_H-elongata_contig81165.15772.1 vs. uniprot
Match: A0A177VSQ5_9BASI (Integrase catalytic domain-containing protein n=1 Tax=Tilletia controversa TaxID=13291 RepID=A0A177VSQ5_9BASI)

HSP 1 Score: 125 bits (315), Expect = 1.560e-30
Identity = 62/149 (41.61%), Postives = 92/149 (61.74%), Query Frame = 0
Query:    7 SSEWPQWKRAIAHEMDGQTTRGVWQVVERPKGKTVLGTRVVFKRKIDKDGRIEKYKCRLVAQGFRQVKGIHYEEYSSPTPAQASIRMVLSMIAALGWEAWQLDVDMAYLEADVEEEIYVELPEAYRDSRKQVGLLRKAMYGLVHARLLW 155
            S+EW QWK+A+  E+   T  G W +VE   G  ++G+R V+K K+D+DG   +YK RLVAQGF Q +GI ++E  +P     ++R+V+S+  ALG     +D+  AYL   + EE+Y++ P  Y D   +V LLR+A+YGL  A   W
Sbjct:  703 SAEWAQWKQAMDEEVASLTEMGTWVLVEPRSGHNIVGSRWVYKLKLDRDGNAARYKARLVAQGFTQREGIDFKETFAPVARLVTVRLVISVALALGLHLGSIDIKTAYLNGKLHEEVYMQQPPEYDDGTGRVCLLRRAIYGLKQAGRAW 851          
BLAST of mRNA_H-elongata_contig81165.15772.1 vs. uniprot
Match: A0A438E4T4_VITVI (Retrovirus-related Pol polyprotein from transposon RE1 n=6 Tax=Vitis vinifera TaxID=29760 RepID=A0A438E4T4_VITVI)

HSP 1 Score: 125 bits (314), Expect = 2.100e-30
Identity = 61/144 (42.36%), Postives = 94/144 (65.28%), Query Frame = 0
Query:   13 WKRAIAHEMDGQTTRGVWQVVERPKGKTVLGTRVVFKRKIDKDGRIEKYKCRLVAQGFRQVKGIHYEEYSSPTPAQASIRMVLSMIAALGWEAWQLDVDMAYLEADVEEEIYVELPEAYRDSRK-QVGLLRKAMYGLVHARLLW 155
            W+ A+A E++   T   W+VV+ P  K  +G + ++K K + DG IE+YK RLVAQGF Q++GI Y+E  SP     S+R  L+++ A  WE  Q+DV+ A+L  D+EEE+Y++LPE ++ + K +V  L+K++YGL  A   W
Sbjct:  565 WREAMAKEIEALETNQTWKVVDLPPEKKAIGCKWIYKIKYNADGSIERYKARLVAQGFTQIEGIDYQEMFSPVAKMTSVRWFLAVVVAKRWELHQMDVNNAFLHGDLEEEVYMKLPEGFKATGKNKVCKLQKSLYGLKQASRQW 708          
BLAST of mRNA_H-elongata_contig81165.15772.1 vs. uniprot
Match: A0A177U2V9_9BASI (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Tilletia TaxID=13289 RepID=A0A177U2V9_9BASI)

HSP 1 Score: 124 bits (311), Expect = 4.930e-30
Identity = 62/149 (41.61%), Postives = 91/149 (61.07%), Query Frame = 0
Query:    7 SSEWPQWKRAIAHEMDGQTTRGVWQVVERPKGKTVLGTRVVFKRKIDKDGRIEKYKCRLVAQGFRQVKGIHYEEYSSPTPAQASIRMVLSMIAALGWEAWQLDVDMAYLEADVEEEIYVELPEAYRDSRKQVGLLRKAMYGLVHARLLW 155
            S EW QWK+A+  E+   T  G W +VE   G  ++G+R V+K K+D+DG   +YK RLVAQGF Q +GI ++E  +P     ++R+V+S+  ALG     +D+  AYL   + EE+Y++ P  Y D   +V LLR+A+YGL  A   W
Sbjct:  232 SVEWAQWKQAMDEEVASLTEMGTWVLVEPRSGHNIVGSRWVYKLKLDRDGNAARYKARLVAQGFTQREGIDFKETFAPVARLVTVRLVISVALALGLHLGSIDIKTAYLNGKLHEEVYMQQPPEYDDGTGRVCLLRRAIYGLRQAGRAW 380          
BLAST of mRNA_H-elongata_contig81165.15772.1 vs. uniprot
Match: A0A438GNV2_VITVI (Retrovirus-related Pol polyprotein from transposon RE1 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438GNV2_VITVI)

HSP 1 Score: 123 bits (309), Expect = 6.390e-30
Identity = 61/144 (42.36%), Postives = 93/144 (64.58%), Query Frame = 0
Query:   13 WKRAIAHEMDGQTTRGVWQVVERPKGKTVLGTRVVFKRKIDKDGRIEKYKCRLVAQGFRQVKGIHYEEYSSPTPAQASIRMVLSMIAALGWEAWQLDVDMAYLEADVEEEIYVELPEAYRDSRK-QVGLLRKAMYGLVHARLLW 155
            W+ A+A E++   T   W+VV+ P  K  +G + ++K K + DG IE+YK RLVAQGF Q++GI Y+E  SP     S+R  L++  A  WE  Q+DV+ A+L  D+EEE+Y++LPE ++ + K +V  L+K++YGL  A   W
Sbjct:   96 WREAMAKEIEALETNQTWKVVDLPPEKKAIGCKWIYKIKYNADGSIERYKARLVAQGFTQIEGIDYQETFSPVAKMTSVRCFLAIAVAKRWELHQMDVNNAFLHGDLEEEVYMKLPEGFKATGKNKVCKLQKSLYGLKQASRQW 239          
BLAST of mRNA_H-elongata_contig81165.15772.1 vs. uniprot
Match: A0A4Y9ZVS1_9AGAM (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Hericium alpestre TaxID=135208 RepID=A0A4Y9ZVS1_9AGAM)

HSP 1 Score: 123 bits (308), Expect = 6.920e-30
Identity = 66/155 (42.58%), Postives = 92/155 (59.35%), Query Frame = 0
Query:    3 EAQASSEWPQWKRAIAHEMDGQTTRGVWQVVERPKGKTVLGTRVVFKRKIDKDGRIEKYKCRLVAQGFRQVKGIHYEEYSSPTPAQASIRMVLSMIAALGWEAWQLDVDMAYLEADVEEEIYVELPEAYRD--SRKQVGLLRKAMYGLVHARLLW 155
            EA+AS EWPQW+ AI  E+      G W++ E+P G  V+G+  VFK K D  G I KYK RLVAQGF Q+ G+ Y +  +P    +SIR++ ++ A   WE  Q+DV  AYL  D+EEEI+++ P  +      ++V  L K +YGL  A   W
Sbjct:   35 EAKASGEWPQWEAAIEDELGRMKKMGTWELAEKPPGANVVGSWWVFKIKRDASGAIAKYKARLVAQGFSQIPGVDYTDTFAPVAKLSSIRILAALAARFDWELHQMDVKNAYLNGDLEEEIFMKQPPGFPTPGQEQKVCHLFKPIYGLKQAGRRW 189          
BLAST of mRNA_H-elongata_contig81165.15772.1 vs. uniprot
Match: A5BCC7_VITVI (Uncharacterized protein n=1 Tax=Vitis vinifera TaxID=29760 RepID=A5BCC7_VITVI)

HSP 1 Score: 124 bits (310), Expect = 7.380e-30
Identity = 61/144 (42.36%), Postives = 93/144 (64.58%), Query Frame = 0
Query:   13 WKRAIAHEMDGQTTRGVWQVVERPKGKTVLGTRVVFKRKIDKDGRIEKYKCRLVAQGFRQVKGIHYEEYSSPTPAQASIRMVLSMIAALGWEAWQLDVDMAYLEADVEEEIYVELPEAYRDSRK-QVGLLRKAMYGLVHARLLW 155
            W+ A+A E++   T   W+VV+ P  K  +G + ++K K + DG IE+YK RLVAQGF Q++GI Y+E  SP     S+R  L++  A  WE  Q+DV+ A+L  D+EEE+Y++LPE ++ + K +V  L+K++YGL  A   W
Sbjct:  819 WREAMAKEIEALETNQTWKVVDLPPEKKAIGCKWIYKIKYNADGSIERYKARLVAQGFTQIEGIDYQEXFSPVAKMTSVRCFLAVXVAKRWELHQMDVNNAFLHGDLEEEVYMKLPEGFKATGKNKVCKLQKSLYGLKQASRQW 962          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig81165.15772.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A401GYH9_9APHY2.060e-3240.65Uncharacterized protein n=6 Tax=Sparassis crispa T... [more]
A0A401GN13_9APHY2.460e-3144.67Uncharacterized protein n=1 Tax=Sparassis crispa T... [more]
A0A151RGT1_CAJCA3.520e-3139.31Retrovirus-related Pol polyprotein from transposon... [more]
A0A177U0B1_9BASI7.210e-3141.61Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A177VSQ5_9BASI1.560e-3041.61Integrase catalytic domain-containing protein n=1 ... [more]
A0A438E4T4_VITVI2.100e-3042.36Retrovirus-related Pol polyprotein from transposon... [more]
A0A177U2V9_9BASI4.930e-3041.61Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A438GNV2_VITVI6.390e-3042.36Retrovirus-related Pol polyprotein from transposon... [more]
A0A4Y9ZVS1_9AGAM6.920e-3042.58Reverse transcriptase Ty1/copia-type domain-contai... [more]
A5BCC7_VITVI7.380e-3042.36Uncharacterized protein n=1 Tax=Vitis vinifera Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 29..155
e-value: 2.7E-32
score: 112.3
NoneNo IPR availablePANTHERPTHR11439:SF273coord: 6..152
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 6..152

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig81165contigH-elongata_contig81165:1593..2060 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig81165.15772.1mRNA_H-elongata_contig81165.15772.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig81165 1572..2863 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig81165.15772.1 ID=prot_H-elongata_contig81165.15772.1|Name=mRNA_H-elongata_contig81165.15772.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=156bp
MGEAQASSEWPQWKRAIAHEMDGQTTRGVWQVVERPKGKTVLGTRVVFKR
KIDKDGRIEKYKCRLVAQGFRQVKGIHYEEYSSPTPAQASIRMVLSMIAA
LGWEAWQLDVDMAYLEADVEEEIYVELPEAYRDSRKQVGLLRKAMYGLVH
ARLLW*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2
IPR039537Retrotran_Ty1/copia-like