prot_H-elongata_contig81118.15768.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig81118.15768.1
Unique Name	prot_H-elongata_contig81118.15768.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	190

Homology

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BLAST of mRNA_H-elongata_contig81118.15768.1 vs. uniprot
Match: D8LS39_ECTSI (Utp12 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LS39_ECTSI)

HSP 1 Score: 223 bits (569), Expect = 2.020e-64
Identity = 104/116 (89.66%), Postives = 115/116 (99.14%), Query Frame = 0

Query:    1 MIQDYAAHEKAVWSLDLRPDGKGLVTGSADRQVKFWDFEVADGNIGLVHTRSLKMVDDVLCVRYSKHKQESKLLLAVAILDSTVKIFHDDSLKFFLSLYGHKLPVMSMDISDDGAL 116
            MIQDYAAHEKA+WS+DLRPDGKGLV+GSADRQVKFWDFEVA+GN+GLVHTRSLK+ DDVLCVRYS+HKQ+SKLLLAVA+LDSTVK+FHDDSLKFFLSLYGHKLPVMSMD+SDDGAL
Sbjct:  568 MIQDYAAHEKAIWSIDLRPDGKGLVSGSADRQVKFWDFEVANGNLGLVHTRSLKVTDDVLCVRYSRHKQQSKLLLAVALLDSTVKVFHDDSLKFFLSLYGHKLPVMSMDVSDDGAL 683

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BLAST of mRNA_H-elongata_contig81118.15768.1 vs. uniprot
Match: A0A835Z9P3_9STRA (WD40-repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9P3_9STRA)

HSP 1 Score: 181 bits (459), Expect = 1.960e-49
Identity = 82/115 (71.30%), Postives = 101/115 (87.83%), Query Frame = 0

Query:    2 IQDYAAHEKAVWSLDLRPDGKGLVTGSADRQVKFWDFEVADGNIGLVHTRSLKMVDDVLCVRYSKHKQESKLLLAVAILDSTVKIFHDDSLKFFLSLYGHKLPVMSMDISDDGAL 116
            + DY AH  A+WSLD+RPDG G+ TGSAD QVKFW+FEVA GN+ +VHTR+LKM DDVLCVRYS+ + ++K L+AVA+LD+TVK+FH+D+LKFFLSLYGHKLPVMSMD+SDDG L
Sbjct:  516 LWDYEAHAGAIWSLDVRPDGVGMATGSADGQVKFWEFEVAKGNLAVVHTRTLKMADDVLCVRYSRGRGKAKRLIAVAVLDATVKVFHEDTLKFFLSLYGHKLPVMSMDMSDDGTL 630

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BLAST of mRNA_H-elongata_contig81118.15768.1 vs. uniprot
Match: M4BDA8_HYAAE (Utp12 domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BDA8_HYAAE)

HSP 1 Score: 157 bits (398), Expect = 3.570e-41
Identity = 80/124 (64.52%), Postives = 96/124 (77.42%), Query Frame = 0

Query:    3 QDYAAHE-KAVWSLDLRPDGKGLVTGSADRQVKFWDFEV-----ADGN----IGLVHTRSLKMVDDVLCVRYSKHKQESKLLLAVAILDSTVKIFHDDSLKFFLSLYGHKLPVMSMDISDDGAL 116
            +D  AH   AVWS+D+RPDG+G+VTG AD++V FWDFE+     A+ N    +GL HTR LKM DDVLCVRYS  K   KL++AVA+LD TVK+FHDDSLKFF+SLYGHKLPVMSMDIS D A+
Sbjct:  474 KDEQAHNGSAVWSIDVRPDGRGIVTGGADQRVNFWDFEMHRFDNAEKNSTLRLGLSHTRMLKMSDDVLCVRYSNTKDSKKLVVAVALLDCTVKVFHDDSLKFFVSLYGHKLPVMSMDISSDDAM 597

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BLAST of mRNA_H-elongata_contig81118.15768.1 vs. uniprot
Match: D0NBI5_PHYIT (Utp12 domain-containing protein n=4 Tax=Phytophthora TaxID=4783 RepID=D0NBI5_PHYIT)

HSP 1 Score: 154 bits (389), Expect = 5.780e-40
Identity = 77/124 (62.10%), Postives = 92/124 (74.19%), Query Frame = 0

Query:    3 QDYAAHE-KAVWSLDLRPDGKGLVTGSADRQVKFWDFEVADGN---------IGLVHTRSLKMVDDVLCVRYSKHKQESKLLLAVAILDSTVKIFHDDSLKFFLSLYGHKLPVMSMDISDDGAL 116
            +D  AH   AVWS+D+RPDG+G+VTG AD+ V FWDFE+   N         +GL H R LKM DDVLCVR+S  K   KL++AVA+LD TVK+FHDDSLKFF+SLYGHKLPVMSMDIS D A+
Sbjct:  470 KDEEAHNGSAVWSIDVRPDGRGIVTGGADQHVNFWDFEMLRPNDAEPKSALRLGLSHARMLKMSDDVLCVRFSNTKDPKKLVVAVALLDCTVKVFHDDSLKFFVSLYGHKLPVMSMDISSDDAM 593

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BLAST of mRNA_H-elongata_contig81118.15768.1 vs. uniprot
Match: A0A5D6Y6H3_9STRA (Utp12 domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y6H3_9STRA)

HSP 1 Score: 154 bits (388), Expect = 7.830e-40
Identity = 76/118 (64.41%), Postives = 93/118 (78.81%), Query Frame = 0

Query:    6 AAHE-KAVWSLDLRPDGKGLVTGSADRQVKFWDFEV-----ADG-NIGLVHTRSLKMVDDVLCVRYSKHKQESKLLLAVAILDSTVKIFHDDSLKFFLSLYGHKLPVMSMDISDDGAL 116
            +AH   AVWS+D+RPDG+G+VTG AD+ V FWDFE+     +DG  +GL H R LKM DDVLCVR+S  +   KL++AVA+LD TVK+FHDDSLKFF+SLYGHKLPVMSMDIS D A+
Sbjct:  487 SAHNGSAVWSIDVRPDGRGIVTGGADQHVNFWDFEMHRIEGSDGLRLGLSHARLLKMADDVLCVRFSNTRDAKKLVVAVALLDCTVKVFHDDSLKFFVSLYGHKLPVMSMDISSDDAM 604

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BLAST of mRNA_H-elongata_contig81118.15768.1 vs. uniprot
Match: A0A7S2KBP7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KBP7_9STRA)

HSP 1 Score: 147 bits (371), Expect = 1.560e-39
Identity = 72/117 (61.54%), Postives = 88/117 (75.21%), Query Frame = 0

Query:    1 MIQDYAAHEKAVWSLDLRPDGKGLVTGSADRQVKFWDFEVAD-GNIGLVHTRSLKMVDDVLCVRYSKHKQESKLLLAVAILDSTVKIFHDDSLKFFLSLYGHKLPVMSMDISDDGAL 116
            +  D   H+ A+WSLD+R DG GLVTG AD  VKFW+FE +D G   L+HTR+LKM DDV+ VRYS  +  SK L+AV+ LDST+KIF DDSLKFFLSLYGHKLP +++D SDD  L
Sbjct:   90 IFSDEEGHDGAIWSLDIRSDGGGLVTGGADHLVKFWEFEESDSGEPSLIHTRTLKMSDDVVAVRYSYSQDTSKRLVAVSSLDSTIKIFFDDSLKFFLSLYGHKLPALAVDCSDDDVL 206

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BLAST of mRNA_H-elongata_contig81118.15768.1 vs. uniprot
Match: A0A662WIE0_9STRA (Utp12 domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WIE0_9STRA)

HSP 1 Score: 152 bits (385), Expect = 2.010e-39
Identity = 77/124 (62.10%), Postives = 92/124 (74.19%), Query Frame = 0

Query:    3 QDYAAHE-KAVWSLDLRPDGKGLVTGSADRQVKFWDFEV-----ADGN----IGLVHTRSLKMVDDVLCVRYSKHKQESKLLLAVAILDSTVKIFHDDSLKFFLSLYGHKLPVMSMDISDDGAL 116
            +D  AH   AVWS+D+RPDG+G+VTG AD+ V FWDFE+     AD      +GL H R LKM DDVLCVR+S  K   KL++AVA+LD TVK+FHDDSLKFF+SLYGHKLPVMSMDIS D  +
Sbjct:  476 KDEEAHNGSAVWSIDVRPDGRGIVTGGADQHVNFWDFEMHRPDDADAGSALRLGLSHARMLKMADDVLCVRFSNTKDAKKLVVAVALLDCTVKVFHDDSLKFFVSLYGHKLPVMSMDISSDDTM 599

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BLAST of mRNA_H-elongata_contig81118.15768.1 vs. uniprot
Match: A0A3R7HXA8_9STRA (FYVE-type domain-containing protein n=4 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7HXA8_9STRA)

HSP 1 Score: 152 bits (385), Expect = 2.140e-39
Identity = 76/122 (62.30%), Postives = 93/122 (76.23%), Query Frame = 0

Query:    4 DYAAHEKAVWSLDLRPDGKGLVTGSADRQVKFWDFEV-----ADGN----IGLVHTRSLKMVDDVLCVRYSKHKQESKLLLAVAILDSTVKIFHDDSLKFFLSLYGHKLPVMSMDISDDGAL 116
            D A +  AVWS+D+RPDG+G+VTG AD+ V FWDFE+     A+ N    +GL H R LKM DDVLCVR+S  K   KL++AVA+LD TVK+FHDDSLKFF+SLYGHKLPVMSMDIS D ++
Sbjct: 1160 DEAHNGSAVWSIDVRPDGRGIVTGGADQHVNFWDFEMHRPDDAEPNSALRLGLSHARMLKMSDDVLCVRFSNTKDAKKLVVAVALLDCTVKVFHDDSLKFFVSLYGHKLPVMSMDISSDDSM 1281

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BLAST of mRNA_H-elongata_contig81118.15768.1 vs. uniprot
Match: H3H2A5_PHYRM (Utp12 domain-containing protein n=17 Tax=Phytophthora TaxID=4783 RepID=H3H2A5_PHYRM)

HSP 1 Score: 152 bits (383), Expect = 3.770e-39
Identity = 76/124 (61.29%), Postives = 92/124 (74.19%), Query Frame = 0

Query:    3 QDYAAHE-KAVWSLDLRPDGKGLVTGSADRQVKFWDFEVADGN---------IGLVHTRSLKMVDDVLCVRYSKHKQESKLLLAVAILDSTVKIFHDDSLKFFLSLYGHKLPVMSMDISDDGAL 116
            +D  AH   AVWS+D+RPDG+G+VTG AD+ V FWDFE+   +         +GL H R LKM DDVLCVR+S  K   KL++AVA+LD TVK+FHDDSLKFF+SLYGHKLPVMSMDIS D A+
Sbjct:  468 KDEEAHNGSAVWSIDVRPDGRGIVTGGADQHVNFWDFEMHRPDDAEPTSALRLGLSHARMLKMSDDVLCVRFSNTKDPKKLVVAVALLDCTVKVFHDDSLKFFVSLYGHKLPVMSMDISSDDAM 591

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BLAST of mRNA_H-elongata_contig81118.15768.1 vs. uniprot
Match: A0A2D4BUH8_PYTIN (Utp12 domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BUH8_PYTIN)

HSP 1 Score: 150 bits (380), Expect = 9.310e-39
Identity = 74/120 (61.67%), Postives = 92/120 (76.67%), Query Frame = 0

Query:    3 QDYAAHEKAVWSLDLRPDGKGLVTGSADRQVKFWDFEV----ADG--NIGLVHTRSLKMVDDVLCVRYSKHKQESKLLLAVAILDSTVKIFHDDSLKFFLSLYGHKLPVMSMDISDDGAL 116
            ++ A +  AVWS+D+RPDG+G+VTG AD+ V FWDFE+    A G   +GL H R LKM DDVLCVR+S  K   KL++AVA+LD TVK+FHDDSLKFF+SLYGHKLPVM+MDIS D  +
Sbjct:  463 EESAHNGSAVWSMDVRPDGRGIVTGGADQHVNFWDFEMHRDAATGALRLGLSHARLLKMSDDVLCVRFSNTKDAKKLVVAVALLDCTVKVFHDDSLKFFVSLYGHKLPVMAMDISSDDTM 582

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig81118.15768.1 vs. uniprot

BLAST of mRNA_H-elongata_contig81118.15768.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LS39_ECTSI	2.020e-64	89.66	Utp12 domain-containing protein n=2 Tax=Ectocarpus...	[more]
A0A835Z9P3_9STRA	1.960e-49	71.30	WD40-repeat-containing domain protein n=1 Tax=Trib...	[more]
M4BDA8_HYAAE	3.570e-41	64.52	Utp12 domain-containing protein n=1 Tax=Hyaloperon...	[more]
D0NBI5_PHYIT	5.780e-40	62.10	Utp12 domain-containing protein n=4 Tax=Phytophtho...	[more]
A0A5D6Y6H3_9STRA	7.830e-40	64.41	Utp12 domain-containing protein n=1 Tax=Pythium br...	[more]
A0A7S2KBP7_9STRA	1.560e-39	61.54	Hypothetical protein (Fragment) n=1 Tax=Leptocylin...	[more]
A0A662WIE0_9STRA	2.010e-39	62.10	Utp12 domain-containing protein n=2 Tax=Nothophyto...	[more]
A0A3R7HXA8_9STRA	2.140e-39	62.30	FYVE-type domain-containing protein n=4 Tax=Phytop...	[more]
H3H2A5_PHYRM	3.770e-39	61.29	Utp12 domain-containing protein n=17 Tax=Phytophth...	[more]
A0A2D4BUH8_PYTIN	9.310e-39	61.67	Utp12 domain-containing protein n=1 Tax=Pythium in...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR020472	G-protein beta WD-40 repeat	PRINTS	PR00320	GPROTEINBRPT	coord: 159..173 score: 30.12 coord: 117..131 score: 44.36 coord: 24..38 score: 37.0
IPR001680	WD40 repeat	SMART	SM00320	WD40_4	coord: 46..88 e-value: 35.0 score: 7.3 coord: 133..172 e-value: 3.0E-5 score: 33.4 coord: 1..37 e-value: 9.2E-4 score: 28.5 coord: 91..130 e-value: 6.7E-8 score: 42.2
IPR001680	WD40 repeat	PFAM	PF00400	WD40	coord: 4..37 e-value: 9.8E-6 score: 26.2 coord: 97..129 e-value: 9.6E-7 score: 29.4 coord: 134..172 e-value: 9.4E-4 score: 20.0
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 140..181 score: 11.31
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 98..139 score: 14.519
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 5..39 score: 14.318
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	2.130.10.10		coord: 43..189 e-value: 2.3E-30 score: 107.6
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	2.130.10.10		coord: 1..42 e-value: 1.2E-8 score: 36.5
None	No IPR available	PANTHER	PTHR19853:SF0	WD REPEAT-CONTAINING PROTEIN 3	coord: 2..189
None	No IPR available	PANTHER	PTHR19853	WD REPEAT CONTAINING PROTEIN 3 WDR3	coord: 2..189
IPR019775	WD40 repeat, conserved site	PROSITE	PS00678	WD_REPEATS_1	coord: 24..38
IPR017986	WD40-repeat-containing domain	PROSITE	PS50294	WD_REPEATS_REGION	coord: 5..189 score: 32.193
IPR036322	WD40-repeat-containing domain superfamily	SUPERFAMILY	50978	WD40 repeat-like	coord: 4..189

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig81118	contig	H-elongata_contig81118:590..2759 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig81118.15768.1	mRNA_H-elongata_contig81118.15768.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig81118 563..2759 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig81118.15768.1 ID=prot_H-elongata_contig81118.15768.1|Name=mRNA_H-elongata_contig81118.15768.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=190bp
MIQDYAAHEKAVWSLDLRPDGKGLVTGSADRQVKFWDFEVADGNIGLVHT
RSLKMVDDVLCVRYSKHKQESKLLLAVAILDSTVKIFHDDSLKFFLSLYG
HKLPVMSMDISDDGALLATGSADKTVKVWGLDFGDCHRSFLAHDDSIMGV
RFVRGTHYMFTSSKDKTIKHWDADHFEKILTLRGHQSEV*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR020472	G-protein_beta_WD-40_rep
IPR001680	WD40_repeat
IPR015943	WD40/YVTN_repeat-like_dom_sf
IPR019775	WD40_repeat_CS
IPR017986	WD40_repeat_dom
IPR036322	WD40_repeat_dom_sf